BAC Information

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BAC

Clone NameB6Ng01-033F11
Chromosome15 (Build37)
Map Location 29,006,383 - 29,007,121
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
Downstream geneLOC382975
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033F11.bB6Ng01-033F11.g
ACCDH862416DH862417
length929743
definitionDH862416|Mus musculus domesticus DNA, BAC clone: B6Ng01-033F11, 5' end.DH862417|Mus musculus domesticus DNA, BAC clone: B6Ng01-033F11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctataaactataaaggatgagaaggtatttcacagaaatgtttga
aaactccaagaaaagaatggaggaagggcagaatttccacagtgtcagat
ggtaaaataaagaggagaaaatggattaaaatagtgctgcatcatattga
gaatcacatgagatgacacaatggtgctggacttgtcttcttgacccagg
aatgggttcattttaaagatatggttggaatatagtcaacatgctcatca
ataactttaatttgggtgatttgtagaggattgttgtatgctctgtgttt
gtgtaatgtcagtgaactaatgaaaataatgaacagcaaaataagagggt
atgaattttaaattttatatattaatattaatatgtaaaatatgtattgg
agacatagaatagcaatagcactctggagaacaggccacactgggcagca
cagtagagcctgttctggtggaaagggtgctggtgagcaggtccaagggc
ttgagagcaggggacctggtcctgcattaggtgaggtagctagggacatg
ctggagagctcccccttgtggtgtgagtgcaggagcaatatgacactaac
caactcagttaccacccaagccaagttccagggctttaagttggcccatt
tcaaaatctaccccatctgtgaatgtctagagcaaatgaaggtattaatc
ctgcagatccaaaactgtaggacctccacaatacaaggcaacagcaggat
atcacagagaattctggtgagggtcctgtattcatagtgtagcaaagcca
gaggccccaaaccagataatgattcattgcatgaaatatgaaattaaaga
catgtggacagaagggcatacttgtgacagactgacacactccagttcca
caaagagaattgtttgtttgtccgtttat
gaattctctatgactttcaaataaaaactcaaaagaataatatgaacaac
aatacatgttcttaacatatgtgagctatagtgaaatatatatatatata
tatatatatatatatatatatatatatatatatacacacacacacttttt
gagtaaaatcttcttaagttcctagtttatgatttgtttattgagtgtcc
acataatgatcccatttacttagtagattcaaaagtaatcctgttaagta
attttaattacaaagataaaagcttatttttaatcccaatgtgggaacat
aattctttttcaccacttcctctatctggtaaaccactttcaactttttt
tcttgattaacagatgttatatgataagtacatatagctccatgtctcta
ttttaatatattctcacaagattggaatcatctttagtgagtcatgctgg
taaagacttacataagttggatccttacattctctgaattttttttcttc
acaaagcctgccattaccattattgtagacttttagcccagagaataaga
gatgagctggcaggctgtgctgccgtatacctggattgctctgacggcta
ccttaggaacatggcagtttgcctagctgctgtcacaagcataacattaa
aaactgctttccgctatctcaacaattggttggagaagagttacttttta
ttagaggaccaggtttgtgcttatactttttagtttaagctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_29006383_29007121
seq2: B6Ng01-033F11.g_71_813

seq1  GAATTCTCTATGACTTTCAAATAAAAACTCAAAAGAATAATATGAACAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATGACTTTCAAATAAAAACTCAAAAGAATAATATGAACAAC  50

seq1  AATACATGTTCTTAACATATGTGAGCTATAGTGAA--ATATATATATATA  98
      |||||||||||||||||||||||||||||||||||  |||||||||||||
seq2  AATACATGTTCTTAACATATGTGAGCTATAGTGAAATATATATATATATA  100

seq1  TATATATATATATATATATATATATATATATATACACACACACACTTTTT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATACACACACACACTTTTT  150

seq1  GAGTAAAATCTTCTTAAGTTCCTAGTTTATGATTTGTTTATTGAGTGTCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAATCTTCTTAAGTTCCTAGTTTATGATTTGTTTATTGAGTGTCC  200

seq1  ACATAATGATCCCATTTACTTAGTAGATTCAAAAGTAATCCTGTTAAGTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATGATCCCATTTACTTAGTAGATTCAAAAGTAATCCTGTTAAGTA  250

seq1  ATTTTAATTACAAAGATAAAAGCTTATTTTTAATCCCAATGTGGGAACAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTACAAAGATAAAAGCTTATTTTTAATCCCAATGTGGGAACAT  300

seq1  AATTCTTTTTCACCACTTCCTCTATCTGGTAAACCACTTTCAACTTTTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTTTCACCACTTCCTCTATCTGGTAAACCACTTTCAACTTTTTT  350

seq1  TCTTGATTAACAGATGTTATATGATAAGTACATATAGCTCCATGTCTCTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATTAACAGATGTTATATGATAAGTACATATAGCTCCATGTCTCTA  400

seq1  TTTTAATATATTCTCACAAGATTGGAATCATCTTTAGTGAGTCATGCTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATATATTCTCACAAGATTGGAATCATCTTTAGTGAGTCATGCTGG  450

seq1  TAAAGACTTACATAAGTTGGATCCTTACATTCTCTGAATTTTTTTTCTTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACTTACATAAGTTGGATCCTTACATTCTCTGAATTTTTTTTCTTC  500

seq1  ACAAAGCCTGCCATTACCATTATTGTAGACTTTTAGCCCAGAGAATAAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCCTGCCATTACCATTATTGTAGACTTTTAGCCCAGAGAATAAGA  550

seq1  GATGAGCTGGCAGGCTGTGCTGCCGTATACCTGGATTGCTCTGACGGCTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCTGGCAGGCTGTGCTGCCGTATACCTGGATTGCTCTGACGGCTA  600

seq1  CCTTAGGAACATGGCAGTTTGCCTAGCTGCTGTCACAAGCATAACATT-A  647
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCTTAGGAACATGGCAGTTTGCCTAGCTGCTGTCACAAGCATAACATTAA  650

seq1  AAACTGCTTTCCGCTATCTCAACAATTGGTTGGAGAAGAGTTACTTTTTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCTTTCCGCTATCTCAACAATTGGTTGGAGAAGAGTTACTTTTTA  700

seq1  TTAGAGGACCAGGTTTGTGCTTATACTTTATAG-TTAAGCAGT  739
      ||||||||||||||||||||||||||||| ||| |||||| ||
seq2  TTAGAGGACCAGGTTTGTGCTTATACTTTTTAGTTTAAGCTGT  743