BAC Information

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BAC

Clone NameB6Ng01-034A17
Chromosome15 (Build37)
Map Location 4,239,536 - 4,240,069
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039139, Ghr, LOC223278, Fbxo4, AW549877, LOC100039196, Oxct1
Downstream genePlcxd3, C6, LOC100039214, 4930455B06Rik, C7, Card6, Rpl37, LOC100039281, Prkaa1, Ttc33, Ptger4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034A17.bB6Ng01-034A17.g
ACCDH862918DH862919
length1,013988
definitionDH862918|Mus musculus domesticus DNA, BAC clone: B6Ng01-034A17, 5' end.DH862919|Mus musculus domesticus DNA, BAC clone: B6Ng01-034A17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagaaactagaggatgagtagacatcatgatttcacatgtaaa
tgaaagtttactttctacacaggccccagacatccggccactttccccgt
cagaggatagggttccgcccggcccgggagcgctttgcctgagcatcggc
agcagacatcttggttccgggaacccgccgagagtattctgtacaggtga
gagtgtagaatacagaagctaacaacttctgggacaggccaaagcaactc
agctgcgggacaggtcctgttttggacctttgtccttggccaagagggaa
gtcctaaggccagatatctgtgcacctcccctgtaagaggagagcttgcc
tgcagagagtactctaaccactgaaactcagaggagagatcgagtctccc
aggtctgctgatagaggctaacagaatcacctgaggaacaagctctagcc
agagacaactaaatcaactaactccagagattatcagatggcaaaaggta
aatgtaagaatcttactaacagaaaccaagaccactcaccatcagcagga
cccagcactcccacctcgcccagtccagggcaccccgacacaccagaaaa
gctagacctggatctaaaagaatatctcatgatgatgatggaaaacatca
agaaggaccttaataactcactcaaagaaatacaggagaacactactaaa
ctggtagaagatcttaaagaggaagcacaaaaatcccttaaagaattaca
ggaaaatacgaccaaacaggtgatggaattgaataaaactatccaagact
taaaaagggaagtagacacaataaagaaaacccaaagtgaggcaatgctg
gagatagaaaacctaggaaagaaatctggaacaatagatgcaagcatcag
caacagaatacagagatggaagagagatctcaggtgcagaagattccata
gagaacaggggcacaacaatcaagaaaatacaaatgcaaaaagatcttac
tcaaaacatccag
gaattccttttttattttttagttagtagataatattccattgtgcatga
accctgttttctgtatccattcattaggattcattaggtggtgggcattc
aggttctttctatttcttagttcttatgagttgggaatgtggttgtattg
ttggcgtgacgagctgatctcctttgtagtgaggttgctggctcctatgg
tgattctacttttaagttttgagggaaacttacaccgaggttcacagtgg
cttccccagtctgttcctacaagtatcccctgttagacccatgccaacac
ttcttcctttgtgctttgacacaggtctcagcagagagaacaagagcagt
tagctttgtctctctgacagtagctaatttaactagattgggccagaatt
tcattgtggctttgattttcatttctttaatgattaaggatgttgtgaat
tttcataaaccaaattctcatttggtcttttgtatgtctcccttacatgt
cttatttagatatactgcccacttgtttgtgtgtttgtttgtttgcttgc
ttgctttgagacagggtttctctgtgtagccctggctgtcctgaaacatg
ctctgtagactagtctggccttgaactcatcaatccacctgcctctgctt
cctgagtgctaggattaaagaagtgatgccatacccagccatgctgccta
cttttgcttggattatttgagggatgcttttgctcttgaattgtttgaat
ccatagatacattctggatattaactcttttgtcatatgtgtatttattg
ttagaccctcggaacatcctacatgtgccttgcccctctgcactcggttt
tttcattcttgactgtggcttgttcgatctgctctggagaagcagttagt
gataggatctcattgctactttgcttttctccatgctttggtgacttggc
tggctgcctccctcccttcctccctccctcctgtctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_4239536_4240069
seq2: B6Ng01-034A17.b_48_581 (reverse)

seq1  TGGTCTTGGTTTCTGTTAGTAAGATTCTTACATTTACCTTTTGCCATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTGGTTTCTGTTAGTAAGATTCTTACATTTACCTTTTGCCATCTG  50

seq1  ATAATCTCTGGAGTTAGTTGATTTAGTTGTCTCTGGCTAGAGCTTGTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTCTGGAGTTAGTTGATTTAGTTGTCTCTGGCTAGAGCTTGTTCC  100

seq1  TCAGGTGATTCTGTTAGCCTCTATCAGCAGACCTGGGAGACTCGATCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTGATTCTGTTAGCCTCTATCAGCAGACCTGGGAGACTCGATCTCT  150

seq1  CCTCTGAGTTTCAGTGGTTAGAGTACTCTCTGCAGGCAAGCTCTCCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGTTTCAGTGGTTAGAGTACTCTCTGCAGGCAAGCTCTCCTCTT  200

seq1  ACAGGGGAGGTGCACAGATATCTGGCCTTAGGACTTCCCTCTTGGCCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGAGGTGCACAGATATCTGGCCTTAGGACTTCCCTCTTGGCCAAG  250

seq1  GACAAAGGTCCAAAACAGGACCTGTCCCGCAGCTGAGTTGCTTTGGCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGGTCCAAAACAGGACCTGTCCCGCAGCTGAGTTGCTTTGGCCTG  300

seq1  TCCCAGAAGTTGTTAGCTTCTGTATTCTACACTCTCACCTGTACAGAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAAGTTGTTAGCTTCTGTATTCTACACTCTCACCTGTACAGAATA  350

seq1  CTCTCGGCGGGTTCCCGGAACCAAGATGTCTGCTGCCGATGCTCAGGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGGCGGGTTCCCGGAACCAAGATGTCTGCTGCCGATGCTCAGGCAA  400

seq1  AGCGCTCCCGGGCCGGGCGGAACCCTATCCTCTGACGGGGAAAGTGGCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCTCCCGGGCCGGGCGGAACCCTATCCTCTGACGGGGAAAGTGGCCG  450

seq1  GATGTCTGGGGCCTGTGTAGAAAGTAAACTTTCATTTACATGTGAAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTGGGGCCTGTGTAGAAAGTAAACTTTCATTTACATGTGAAATCA  500

seq1  TGATGTCTACTCATCCTCTAGTTTCTAAGAATTC  534
      ||||||||||||||||||||||||||||||||||
seq2  TGATGTCTACTCATCCTCTAGTTTCTAAGAATTC  534