BAC Information

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BAC

Clone NameB6Ng01-034B10
Chromosome15 (Build37)
Map Location 57,826,219 - 57,978,119
singlet/doubletdoublet
Overlap geneBC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik
Upstream geneBC026439, Zhx2, Derl1, Wdr67
Downstream geneFbxo32, 8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e, EG631797, Tmem65, EG546638, Trmt12, Rnf139, Tatdn1, Ndufb9, Mtss1, LOC100040330
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034B10.bB6Ng01-034B10.g
ACCDH862952DH862953
length713980
definitionDH862952|Mus musculus domesticus DNA, BAC clone: B6Ng01-034B10, 5' end.DH862953|Mus musculus domesticus DNA, BAC clone: B6Ng01-034B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,977,406 - 57,978,119)(57,826,219 - 57,827,215)
sequence
gaattctgaacttttaagcacacacaatcttcaagggcatatgagacaca
aatcatggctaagtgcttagatagtgaattaatggctacagatggaaaga
ggcctacgggcaaagcaccaattatcccagagggtccattaaagatgcat
aaagaaagcacagaggagggactcattaactgagagagagaggaagcagc
aaaggtacaggttagcagtttctcctttttgccttgtccccatctccatc
ctgaaggtggtctggggttaatgtacagtccaggagtctacaaatagcat
tagcaggcagaatacatgatatggcttgaagacatactgcccgatatttc
tcaagtttctgtgaatgttacatagggtaaaaataaataaaatgtgccag
atagtggtgcacgcctataagcccagcactcgggaggaagaggcaggcag
atctctgagtttgaggccagtctggtctacagatagagtttcatgacagc
cagggttacacagagaaaccctgtctcgaagatagagagagagagagaga
gagagagagagcgcgagctggagagatagctcagtgattaagagcactga
ctacttttccagtggacctgagttcaattcagaggcaaggtaggtatatc
tctttgagttcaaggccagccttgacagtagatcctgttttataggaaag
gaggggaggggat
gaattctactttttccccccctcatcgccatctattggcggagcattggg
gaaaaaaaaaacttggaaaactaagccaacaaaaaatgtaaatgatacaa
aatctctccaagcttagataaaaccttcgtgagcatccttccaatttcct
atgcaaattgtctccgtgtgtttgggctactgtggcagactgtcacagac
caggtggcgtataagcaactgtgatctatttctcacagttctggagccag
agagatctaagatgtctgcaaattcggtgtttggttgagactctctgcct
tgtgtgtaaatgacggtcttactgcatctttcaatggcatgcagaatgag
ggagctctgtcacacagggcccccaactcctttctggggccccaccctcc
tgagctgattacctccaaagcccagcctcccagaaccactgcaccagaga
ctgtgtctcaacatagaattgggggtgcatgttcagccgtagcgcgtgtt
tatcagtgaatacccagttagtaagtgacgccctcactttgcgtccccag
aacatctccatcaggagtgtggaaggggaggtgtattgtgccaagtcagg
caggaaatttgccggccaaatccaagagaagttcatcatctcagactgga
ggtttgtcttatccggatcatacaggtgagtactggtttcatctgctgtc
caggcttccgggcagtgatgggctaagtggggtaccagctggatgatggc
tgctcccaccccaccccccccagagctcccagctcttctttctgccacag
ctagagctcaccaaataaacgaagccagaagtgagaatgtgcccttcctg
acacttaattggacagagactctttctactctctccggcctctagaattg
tgataaacatagatttgctttaactttttcttttgatggtgagtgaacac
gcatgatttacagttggagaataagctatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_57977406_57978119
seq2: B6Ng01-034B10.b_42_753 (reverse)

seq1  TCCCCTCCCCTCCTTTCCTATAAAACAGGATCTTACTGTCAAGGCTGGCC  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCCCCTCCCCTCCTTTCCTATAAAACAGGATC-TACTGTCAAGGCTGGCC  49

seq1  TTGAACTCAAAGAGATATACCTACCCTGCCTCCTGAATTGAACTCAGGTC  100
      ||||||||||||||||||||||||| ||||| ||||||||||||||||||
seq2  TTGAACTCAAAGAGATATACCTACCTTGCCT-CTGAATTGAACTCAGGTC  98

seq1  CACTGGAAAAGTAGTCAGTGCTCTTAATCACTGAGCTATCTCTCCAGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAAAGTAGTCAGTGCTCTTAATCACTGAGCTATCTCTCCAGCTC  148

seq1  GCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTTCGAGACAGGGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTTCGAGACAGGGTTTC  198

seq1  TCTGTGTAACCCTGGCTGTCATGAAACTCTATCTGTAGACCAGACTGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTAACCCTGGCTGTCATGAAACTCTATCTGTAGACCAGACTGGCC  248

seq1  TCAAACTCAGAGATCTGCCTGCCTCTTCCTCCCGAGTGCTGGGCTTATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTCAGAGATCTGCCTGCCTCTTCCTCCCGAGTGCTGGGCTTATAG  298

seq1  GCGTGCACCACTATCTGGCACATTTTATTTATTTTTACCCTATGTAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGCACCACTATCTGGCACATTTTATTTATTTTTACCCTATGTAACAT  348

seq1  TCACAGAAACTTGAGAAATATCGGGCAGTATGTCTTCAAGCCATATCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAAACTTGAGAAATATCGGGCAGTATGTCTTCAAGCCATATCATG  398

seq1  TATTCTGCCTGCTAATGCTATTTGTAGACTCCTGGACTGTACATTAACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGCCTGCTAATGCTATTTGTAGACTCCTGGACTGTACATTAACCC  448

seq1  CAGACCACCTTCAGGATGGAGATGGGGACAAGGCAAAAAGGAGAAACTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCACCTTCAGGATGGAGATGGGGACAAGGCAAAAAGGAGAAACTGC  498

seq1  TAACCTGTACCTTTGCTGCTTCCTCTCTCTCTCAGTTAATGAGTCCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGTACCTTTGCTGCTTCCTCTCTCTCTCAGTTAATGAGTCCCTCC  548

seq1  TCTGTGCTTTCTTTATGCATCTTTAATGGACCCTCTGGGATAATTGGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCTTTCTTTATGCATCTTTAATGGACCCTCTGGGATAATTGGTGC  598

seq1  TTTGCCCGTAGGCCTCTTTCCATCTGTAGCCATTAATTCACTATCTAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCGTAGGCCTCTTTCCATCTGTAGCCATTAATTCACTATCTAAGC  648

seq1  ACTTAGCCATGATTTGTGTCTCATATGCCCTTGAAGATTGTGTGTGCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGCCATGATTTGTGTCTCATATGCCCTTGAAGATTGTGTGTGCTTA  698

seq1  AAAGTTCAGAATTC  714
      ||||||||||||||
seq2  AAAGTTCAGAATTC  712

seq1: chr15_57826219_57827215
seq2: B6Ng01-034B10.g_68_1047

seq1  GAATTCTACTTTTTCCCCCCCTCATCGCCATCTATTGGCGGAGCATTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTTTTTCCCCCCCTCATCGCCATCTATTGGCGGAGCATTGGG  50

seq1  GAAAAAAAAAACTTGGAAAACTAAGCCAACAAAAAATGTAAATGATACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAAACTTGGAAAACTAAGCCAACAAAAAATGTAAATGATACAA  100

seq1  AATCTCTCCAAGCTTAGATAAAACCTTCGTGAGCATCCTTCCAATTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTCCAAGCTTAGATAAAACCTTCGTGAGCATCCTTCCAATTTCCT  150

seq1  ATGCAAATTGTCTCCGTGTGTTTGGGCTACTGTGGCAGACTGTCACAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATTGTCTCCGTGTGTTTGGGCTACTGTGGCAGACTGTCACAGAC  200

seq1  CAGGTGGCGTATAAGCAACTGTGATCTATTTCTCACAGTTCTGGAGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGCGTATAAGCAACTGTGATCTATTTCTCACAGTTCTGGAGCCAG  250

seq1  AGAGATCTAAGATGTCTGCAAATTCGGTGTTTGGTTGAGACTCTCTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCTAAGATGTCTGCAAATTCGGTGTTTGGTTGAGACTCTCTGCCT  300

seq1  TGTGTGTAAATGACGGTCTTACTGCATCTTTCAATGGCATGCAGAATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTAAATGACGGTCTTACTGCATCTTTCAATGGCATGCAGAATGAG  350

seq1  GGAGCTCTGTCACACAGGGCCCCCAACTCCTTTCTGGGGCCCCACCCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCTGTCACACAGGGCCCCCAACTCCTTTCTGGGGCCCCACCCTCC  400

seq1  TGAGCTGATTACCTCCAAAGCCCAGCCTCCCAGAACCACTGCACCAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGATTACCTCCAAAGCCCAGCCTCCCAGAACCACTGCACCAGAGA  450

seq1  CTGTGTCTCAACATAGAATTGGGGGTGCATGTTCAGCCGTAGCGCGTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTCAACATAGAATTGGGGGTGCATGTTCAGCCGTAGCGCGTGTT  500

seq1  TATCAGTGAATACCCAGTTAGTAAGTGACGCCCTCACTTTGCGTCCCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTGAATACCCAGTTAGTAAGTGACGCCCTCACTTTGCGTCCCCAG  550

seq1  AACATCTCCATCAGGAGTGTGGAAGGGGAGGTGTATTGTGCCAAGTCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTCCATCAGGAGTGTGGAAGGGGAGGTGTATTGTGCCAAGTCAGG  600

seq1  CAGGAAATTTGCCGGCCAAATCCAAGAGAAGTTCATCATCTCAGACTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAATTTGCCGGCCAAATCCAAGAGAAGTTCATCATCTCAGACTGGA  650

seq1  GGTTTGTCTTATCCGGATCATACAGGTGAGTACTGGTTTCATCTGCTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTCTTATCCGGATCATACAGGTGAGTACTGGTTTCATCTGCTGTC  700

seq1  CAGGCTTCCGGGCAGTGATGGGCTAAGTGGGGTACCAGCTGGATGATGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTCCGGGCAGTGATGGGCTAAGTGGGGTACCAGCTGGATGATGGC  750

seq1  TGCTCCCACCCCACCCCCCCCCAGAGCTCCCAGCTCTTCTTTCTGGCCAC  800
      ||||||||||||| |||||||||||||||||||||||||||||| |||||
seq2  TGCTCCCACCCCA-CCCCCCCCAGAGCTCCCAGCTCTTCTTTCT-GCCAC  798

seq1  AGCTAGAGCTCACCAAATAAACGAAGCCAGAAGTGAGAAATGTGGCCCCT  850
      ||||||||||||||||||||||||||||||||||||| ||||||  ||||
seq2  AGCTAGAGCTCACCAAATAAACGAAGCCAGAAGTGAG-AATGTG--CCCT  845

seq1  TCCTGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCCGGCCTCT  900
      ||||||||||  |||||||||||||| |||||||||||||||||||||||
seq2  TCCTGACACT-TAATTGGACAGAGAC-TCTTTCTACTCTCTCCGGCCTCT  893

seq1  TAGGAATTGTGATAAAACAATAGATTTGCTTTTAACTTTTTTCTTTTGTA  950
         |||||||||||||   |||||||||| |||||| ||||||||||| |
seq2  --AGAATTGTGATAAA--CATAGATTTGC-TTTAAC-TTTTTCTTTTG-A  936

seq1  TGTGTGAGTGAACACGCATGAGTGTACAGTTGGAGGAATAAGTTATG  997
      || |||||||||||||||||| | |||||||||| ||||||| ||||
seq2  TG-GTGAGTGAACACGCATGA-TTTACAGTTGGA-GAATAAGCTATG  980