BAC Information

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BAC

Clone NameB6Ng01-035P10
Chromosome10 (Build37)15 (Build37)
Map Location 104,053,903 - 104,054,3638,315,823 - 8,316,698
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035P10.bB6Ng01-035P10.g
ACCDH864290DH864291
length883875
definitionDH864290|Mus musculus domesticus DNA, BAC clone: B6Ng01-035P10, 5' end.DH864291|Mus musculus domesticus DNA, BAC clone: B6Ng01-035P10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(8,315,823 - 8,316,698)
sequence
gaattctcacccgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaattatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctta
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaaaaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaactgaggaatgtatacaaaaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagcgaggtaacccaatcacaa
aggaactcacacaatatgtactcactgataagtggatattagcccaaaac
ttagtatacccaagatataagatacaatttgccaaatgcatgaaactcta
gaagaatgaagaccaaagtgtggacactgtgccccttcttagaattggga
acaaaacacccatggaaggagttactgagacaaaatttggagctgcgaca
aaggttggaccatctagagactgcctatctagggatccaccccataatca
gcttctaaacgctgacacactgcatacactagcagatttgctgaaaggac
cctgatatagctgtctctgtgagactaggcggg
gaattccatgcacagtagtcctgcatcttccaattaccaacaaaccacta
tctcacatagcccctccaggtaaataaatacttatatatatgttatttat
taactaatctgtggtaaatgaatatgcttctgtgaatagcattcacacat
ttaaatattcatgaattatatataaataagtagttctatgcttactagtt
cttatgaacattcactttaaaatgttgcatgtggaattactatgattact
aactaaaggagctaccatatattaattgaattttacatagaaaaagtttg
ctaaaataaatgatgtgtttgggttggtaatatagctccctggcagaatg
cttgcctaatatgtacaaagccctgggtttaatgggttaattcacagcag
cactaccaccacacacacacacacacacacacacacacacacacacacac
agagtaccatatttgatgtaattctgttgtaaataacacaatttggaaga
cagtttatttgaagagaaatggattggtatcctgaaatagaatggtggtt
tttatatagttaagtaaatttttaattatttgatgtgactcttatgaatg
ttaataatttatatgttattttgctgtttttctgtttgtatagatttatt
atatttaaattggagttcaaagaattttgtctcatttaattttaaaaagt
agcatgttgattttttattttcctgatatacttcattgtgttttgtattt
tagccggtttgtgccaccacagacagcttctgggaacagatttatgccac
aacaaattagcccagtgcctagtccatatgcccacagagtcctgcaggaa
tacttgccattattcccatccttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-035P10.b_42_513 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACA-TTTTCTGT  39
      ||||||||          ||||||||||||||||||||||| |||| |||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTTTTGT  50

seq1  ATCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTAT  89
      ||  ||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  ATACATTCCTCAGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTAT  100

seq1  TATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGG  139
      ||||||||||||||||||||| |||||||||||||||||||| |||||||
seq2  TATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTTTTACCGG  150

seq1  TTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCC  189
      ||||| |||||||||||||||||||||| |||||||||||||||||||| 
seq2  TTGGGACATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCT  200

seq1  GGTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAG  239
      ||||||||||||||||||||||| | |||||||||||| |||||||||||
seq2  GGTAGTACTATGTCCAATTTTCTAAGGAACCGCCAGACTGATTTCCAGAG  250

seq1  TGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTT  300

seq1  CTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCC  339
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTCCACATCCACGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCC  350

seq1  ATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTC  400

seq1  CCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTC  439
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATAATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTC  450

seq1  GGTATTCCTCAGGTGAGAATTC  461
      |||||||||| |||||||||||
seq2  GGTATTCCTCGGGTGAGAATTC  472

seq1: chr15_8315823_8316698
seq2: B6Ng01-035P10.g_68_942 (reverse)

seq1  TGAAGGATGGGAAT-ATGGCATGTA-TCCTGCAGGACTCTGTGGGGCATA  48
      |||||||||||||| |||||| ||| |||||||||||||||| |||||||
seq2  TGAAGGATGGGAATAATGGCAAGTATTCCTGCAGGACTCTGT-GGGCATA  49

seq1  TGGACTAGGCACTGGGCTATTTTGTTGTGGCATAAATCTGTTCCCAGAGC  98
      ||||||||||||||||||| ||||||||||||||||||||||||||||  
seq2  TGGACTAGGCACTGGGCTAATTTGTTGTGGCATAAATCTGTTCCCAGAAG  99

seq1  TTGTCTGTGGTGGCACAAACCGGCTAAAATACAAAACACAATGAAGTATA  148
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTGGTGGCACAAACCGGCTAAAATACAAAACACAATGAAGTATA  149

seq1  TCAGGAAAATAAAAAATCAACATGCTACTTTTTAAAATTTAAATGAGACA  198
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCAGGAAAATAAAAAATCAACATGCTACTTTTTAAAA-TTAAATGAGACA  198

seq1  AAATTCTTTGAACTCCAATTTAAATATAATAAAATCTATACAAACAGAAA  248
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAATTCTTTGAACTCCAATTTAAATATAAT-AAATCTATACAAACAGAAA  247

seq1  AACAGCAAAATAACATATAAATTATTAACATTCATAAGAGTCACATCAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAAAATAACATATAAATTATTAACATTCATAAGAGTCACATCAAA  297

seq1  TAATTAAAAATTTACTTAACTATATAAAAACCACCATTCTATTTCAGGAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAAATTTACTTAACTATATAAAAACCACCATTCTATTTCAGGAT  347

seq1  ACCAATCCATTTCTCTTCAAATAAACTGTCTTCCAAATTGTGTTATTTAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCCATTTCTCTTCAAATAAACTGTCTTCCAAATTGTGTTATTTAC  397

seq1  AACAGAATTACATCAAATATGGTACTCTGTGTGTGTGTGTGTGTGTGTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATTACATCAAATATGGTACTCTGTGTGTGTGTGTGTGTGTGTGT  447

seq1  GTGTGTGTGTGTGTGTGTGGTGGTAGTGCTGCTGTGAATTAACCCATTAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGGTGGTAGTGCTGCTGTGAATTAACCCATTAA  497

seq1  ACCCAGGGCTTTGTACATATTAGGCAAGCATTCTGCCAGGGAGCTATATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGGCTTTGTACATATTAGGCAAGCATTCTGCCAGGGAGCTATATT  547

seq1  ACCAACCCAAACACATCATTTATTTTAGCAAACTTTTTCTATGTAAAATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCCAAACACATCATTTATTTTAGCAAACTTTTTCTATGTAAAATT  597

seq1  CAATTAATATATGGTAGCTCCTTTAGTTAGTAATCATAGTAATTCCACAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAATATATGGTAGCTCCTTTAGTTAGTAATCATAGTAATTCCACAT  647

seq1  GCAACATTTTAAAGTGAATGTTCATAAGAACTAGTAAGCATAGAACTACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATTTTAAAGTGAATGTTCATAAGAACTAGTAAGCATAGAACTACT  697

seq1  TATTTATATATAATTCATGAATATTTAAATGTGTGAATGCTATTCACAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATATATAATTCATGAATATTTAAATGTGTGAATGCTATTCACAGA  747

seq1  AGCATATTCATTTACCACAGATTAGTTAATAAATAACATATATATAAGTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATTCATTTACCACAGATTAGTTAATAAATAACATATATATAAGTA  797

seq1  TTTATTTACCTGGAGGGGCTATGTGAGATAGTGGTTTGTTGGTAATTGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTACCTGGAGGGGCTATGTGAGATAGTGGTTTGTTGGTAATTGGA  847

seq1  AGATGCAGGACTACTGTGCATGGAATTC  876
      ||||||||||||||||||||||||||||
seq2  AGATGCAGGACTACTGTGCATGGAATTC  875