BAC Information

Click to search

BAC

Clone NameB6Ng01-036D22
Chromosome15 (Build37)
Map Location 26,227,313 - 26,334,168
singlet/doubletdoublet
Overlap geneAK162044
Upstream gene4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622
Downstream geneFbxl7, LOC622531, LOC625311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036D22.bB6Ng01-036D22.g
ACCDH864484DH864485
length1,037589
definitionDH864484|Mus musculus domesticus DNA, BAC clone: B6Ng01-036D22, 5' end.DH864485|Mus musculus domesticus DNA, BAC clone: B6Ng01-036D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,227,313 - 26,228,373)(26,333,580 - 26,334,168)
sequence
gaattccatgatgttcttgtaactcaggtcctgtaaccctggtgaaaaca
ataccgtccctgaacctggaggaaagaagcgtctatgtcttacgtcacag
ggacaaacagaatgatcccaacagaccttgattaatttctccagttcatt
actgttagattacctttcttttgtcaaatcacattttatcattcctctac
aatttttttcattagaggaaatcactgaagagaatgtaattatctatggt
cattattctcattcagaaagtcttcagtgtcctgtacagtctatactaca
taaatttgtaccttttccttgcttatttattctgttagataggaatctca
gccattaaccttgggtgaacaattaaaaaaaaaaggttcttcctactaca
atagtccatatcacctatatgtcttttccaaagccattgttttcaaagtc
cgtttttagtgaacacagctcacaagtagtgtaaagatgatgctaaatta
tatatacaaattatgctgaaacatggtgatagatcatgttttctacccta
gatgaagtttactggcctttagcccattcttggccaattgtctcactttt
atttaaaggctttattcagtcattcagatgtctagtgtctgacaataatc
ataaattgttgtcttcacatcaaactcttggtttctctaccatcaaaagg
tgaaaaaagtgtgaagaaactttgcttgcggtggatgtgatgatcttctg
cttgcatctttcccattttccctccccgtggctcatgccttcctacaagc
tagatcctattctcagtaaaggatgcatgatgagaagacaaaggtgtgtg
aaagcccttcttgccagatgcgtttgcatgctgggcctgacgtgtacttt
gaactttcttgcctagtactcagaaagctgactctttgcagcatttacag
ctttcagagcatccagcttttttcattgctctgactgcagaatttgtcgt
catacgatagctctaagcgttctagtctggtcatggg
gaattcataatgatgaactgagtaggtctgagtcctaaaatccaatcaca
ttcccagagccttgcctctgaatacagcaccaggacctaaaaaccttcat
ttcaacacgagtcttcatgtaacaatccataccaaaataatagtggtcaa
aaacccacgtccctgcccacacctatctacttcatggggagaaggatctc
agagtcttcttggaaggcatgagttgtgaagactttgcctagttattgga
taagttatactcctctctcctttcccaggaagttcacacatcaaaaagag
acatccctgagcacaatcctgctctgctcaacttaaatgccattgggaaa
ggctggcaagtggagcagagctctggcccaagtgaattttgattgagatt
ccctaaaatttctccttttcaattctcctttttttctttgccaagatgtc
accagcccagtatgtgtgcatgtgcagtgtatagttacaagcatgaatat
gtgttcaaatgctgtaagtggtaaagacagggtatgcaggtatgtacctg
gtcctcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_26227313_26228373
seq2: B6Ng01-036D22.b_47_1083

seq1  GAATTCCATGATGTTCTTGTAACTCAGGTCCTGTAACCCTGGTGAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGATGTTCTTGTAACTCAGGTCCTGTAACCCTGGTGAAAACA  50

seq1  ATACCGTCCCTGAACCTGGAGGAAAGAAGCGTCTATGTCTTACGTCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCGTCCCTGAACCTGGAGGAAAGAAGCGTCTATGTCTTACGTCACAG  100

seq1  GGACAAACAGAATGATCCCAACAGACCTTGATTAATTTCTCCAGTTCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAACAGAATGATCCCAACAGACCTTGATTAATTTCTCCAGTTCATT  150

seq1  ACTGTTAGATTACCTTTCTTTTGTCAAATCACATTTTATCATTCCTCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAGATTACCTTTCTTTTGTCAAATCACATTTTATCATTCCTCTAC  200

seq1  AATTTTTTTCATTAGAGGAAATCACTGAAGAGAATGTAATTATCTATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTCATTAGAGGAAATCACTGAAGAGAATGTAATTATCTATGGT  250

seq1  CATTATTCTCATTCAGAAAGTCTTCAGTGTCCTGTACAGTCTATACTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTCTCATTCAGAAAGTCTTCAGTGTCCTGTACAGTCTATACTACA  300

seq1  TAAATTTGTACCTTTTCCTTGCTTATTTATTCTGTTAGATAGGAATCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTGTACCTTTTCCTTGCTTATTTATTCTGTTAGATAGGAATCTCA  350

seq1  GCCATTAACCTTGGGTGAACAATTAAAAAAAAAAGGTTCTTCCTACTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTAACCTTGGGTGAACAATTAAAAAAAAAAGGTTCTTCCTACTACA  400

seq1  ATAGTCCATATCACCTATATGTCTTTTCCAAAGCCATTGTTTTCAAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCCATATCACCTATATGTCTTTTCCAAAGCCATTGTTTTCAAAGTC  450

seq1  CGTTTTTAGTGAACACAGCTCACAAGTAGTGTAAAGATGATGCTAAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTTAGTGAACACAGCTCACAAGTAGTGTAAAGATGATGCTAAATTA  500

seq1  TATATACAAATTATGCTGAAACATGGTGATAGATCATGTTTTCTACCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACAAATTATGCTGAAACATGGTGATAGATCATGTTTTCTACCCTA  550

seq1  GATGAAGTTTACTGGCCTTTAGCCCATTCTTGGCCAATTGTCTCACTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGTTTACTGGCCTTTAGCCCATTCTTGGCCAATTGTCTCACTTTT  600

seq1  ATTTAAAGGCTTTATTCAGTCATTCAGATGTCTAGTGTCTGACAATAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGGCTTTATTCAGTCATTCAGATGTCTAGTGTCTGACAATAATC  650

seq1  ATAAATTGTTGTCTTCACATCAAACTCTTGGTTTCTCTACCATCAAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTGTTGTCTTCACATCAAACTCTTGGTTTCTCTACCATCAAAAGG  700

seq1  TGAAAAAAGTGTGAAGAAACTTTGCTTGCGGTGGATGTGATGATCTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAAGTGTGAAGAAACTTTGCTTGCGGTGGATGTGATGATCTTCTG  750

seq1  CTTGCATCTTTCCCATTTTCCCTCCCCGTGGCTCATGCCTTCCTACAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATCTTTCCCATTTTCCCTCCCCGTGGCTCATGCCTTCCTACAAGC  800

seq1  TAGATCCTATTCTCAGTAAAGGATGCATGATGAGAAGACAAAGGGTGTGT  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAGATCCTATTCTCAGTAAAGGATGCATGATGAGAAGACAAA-GGTGTGT  849

seq1  GATAGCCCTTTCTTGCCAGATGCGTTTGCCATGGCTGGGCCTGACGTGTA  900
      || ||||| ||||||||||||||||||| ||| |||||||||||||||||
seq2  GAAAGCCC-TTCTTGCCAGATGCGTTTG-CAT-GCTGGGCCTGACGTGTA  896

seq1  CTTTGAACTGTCTTGCCCTAGGTACTCAAGAAAGCTGACTCTTTGCAGCA  950
      ||||||||| ||||| |||| |||||| ||||||||||||||||||||||
seq2  CTTTGAACTTTCTTG-CCTA-GTACTC-AGAAAGCTGACTCTTTGCAGCA  943

seq1  TTTTACAGCCTTTCAGAGCATCCCAGCTTTTTTTCCATTGCTTCCTTGAC  1000
       ||||||| |||||||||||| |||||||||||  |||||||    ||||
seq2  -TTTACAG-CTTTCAGAGCAT-CCAGCTTTTTT--CATTGCT---CTGAC  985

seq1  TGGCCAG-ATGTGTCGTCATTACGGATAGCTCCTAAAGCGTTTCTTAGTC  1049
      ||  ||| || |||||||| ||| ||||||||   |||||||   |||||
seq2  TG--CAGAATTTGTCGTCA-TAC-GATAGCTC--TAAGCGTT--CTAGTC  1027

seq1  TGTGGTCATGGG  1061
        ||||||||||
seq2  --TGGTCATGGG  1037

seq1: chr15_26333580_26334168
seq2: B6Ng01-036D22.g_68_656 (reverse)

seq1  CACACACACACACACACACACACACACACACACGAGGACCAGGTACATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACGAGGACCAGGTACATAC  50

seq1  CTGCATACCCTGTCTTTACCACTTACAGCATTTGAACACATATTCATGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATACCCTGTCTTTACCACTTACAGCATTTGAACACATATTCATGCT  100

seq1  TGTAACTATACACTGCACATGCACACATACTGGGCTGGTGACATCTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTATACACTGCACATGCACACATACTGGGCTGGTGACATCTTGGC  150

seq1  AAAGAAAAAAAGGAGAATTGAAAAGGAGAAATTTTAGGGAATCTCAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAAAAGGAGAATTGAAAAGGAGAAATTTTAGGGAATCTCAATCA  200

seq1  AAATTCACTTGGGCCAGAGCTCTGCTCCACTTGCCAGCCTTTCCCAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACTTGGGCCAGAGCTCTGCTCCACTTGCCAGCCTTTCCCAATGG  250

seq1  CATTTAAGTTGAGCAGAGCAGGATTGTGCTCAGGGATGTCTCTTTTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAGTTGAGCAGAGCAGGATTGTGCTCAGGGATGTCTCTTTTTGAT  300

seq1  GTGTGAACTTCCTGGGAAAGGAGAGAGGAGTATAACTTATCCAATAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAACTTCCTGGGAAAGGAGAGAGGAGTATAACTTATCCAATAACTA  350

seq1  GGCAAAGTCTTCACAACTCATGCCTTCCAAGAAGACTCTGAGATCCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGTCTTCACAACTCATGCCTTCCAAGAAGACTCTGAGATCCTTCT  400

seq1  CCCCATGAAGTAGATAGGTGTGGGCAGGGACGTGGGTTTTTGACCACTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGAAGTAGATAGGTGTGGGCAGGGACGTGGGTTTTTGACCACTAT  450

seq1  TATTTTGGTATGGATTGTTACATGAAGACTCGTGTTGAAATGAAGGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGTATGGATTGTTACATGAAGACTCGTGTTGAAATGAAGGTTTT  500

seq1  TAGGTCCTGGTGCTGTATTCAGAGGCAAGGCTCTGGGAATGTGATTGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCCTGGTGCTGTATTCAGAGGCAAGGCTCTGGGAATGTGATTGGAT  550

seq1  TTTAGGACTCAGACCTACTCAGTTCATCATTATGAATTC  589
      |||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGACTCAGACCTACTCAGTTCATCATTATGAATTC  589