BAC Information

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BAC

Clone NameB6Ng01-037F07
Chromosome15 (Build37)
Map Location 23,439,165 - 23,440,242
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545091, Cdh18, LOC624863
Downstream geneLOC666989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037F07.bB6Ng01-037F07.g
ACCDH865237DH865238
length1,0801,210
definitionDH865237|Mus musculus domesticus DNA, BAC clone: B6Ng01-037F07, 5' end.DH865238|Mus musculus domesticus DNA, BAC clone: B6Ng01-037F07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctcacattaactttatgtgaataatgtaagttttaagatacc
aggtaacttcagatgacttgagtattgatttttctttccctataaatttc
gaagttgcatattgaatgctgtttcaaataaaattgaaataagtcttcat
atgtccacatgtgtcagtttgtttcaaacagctgtttatataagatgatt
cttaagtattagaatattaaatagtccaacacttccttttataaaagatt
gtacatacatatttgtttactttgcatttatatgtgggtatatttatgag
gatttggcatgctctagcatgcatgtgggtgtgaaaagacaacttgtagg
agacggtttccttgttctaccatgtgtcttttaggtattggacattggat
attgggtttgatgtcaaatccttctagccacaggcttatcacagactcct
aaatactgatgtcttgtaattatttatagccagtcgttgtagattttaca
ttatctgaagttactgaagtcaataaaacaggatgtgtgactcactcatt
atgacactactgctatttacttgtgttgcctataaaaatagttaaccatg
gatttttatcctttctggaatgaaagagacagctgtattaagcaacacga
agatgaaatcattttttttcaagattttaatctaaatttgatttttcatt
gtcaatatagtttcttactttcataaactctcatagccctatgtaattct
tgtagaaaatgagagtgctgaggctagtcatggtagattggcaaaactca
atctaagtgtgtgggtttttttatggagtttaaaatgtatcaatgcagtg
agcatcaaacagctttggaaatatcaattaaataattagttaacataatt
ttactaattaaaatgtacagaaagttttggaaacttaatcatatttattt
tattgctctagatgtcttacacaagggagaacagaggaaatatgtacata
gtggatattattacctcaaacaaaggtagaataattttttgtttgtaaca
aagagaaaattccacaaaaaaaagagagaa
gaattctccagaacacagattcattgacactcattttgagttaaaaatga
gcaaatacattcagttactatggcttgataaactctgagattcaatgaaa
gtcggggtcctccagcgccgagtggttaccttgttaattcaaaggatcac
agaggaaattaaaaattattctgagaaaattaagaaagtgaggaaggcac
attgctgatatgcggaaagtcttaatgatgtggataagcaatatagtcat
gctcactgtccctttaagccagtgcctagaaaggagcagagcatggtagt
ctaagagaagttgatgaggaagctgcagaggaaagcatcagagctagctg
tgttcatttcctgaggcttaaaagtatatatttaatgtataaactaaaaa
ttcaaggtaaagcaatgagtgttcatgaggaaattagaacagatcttata
tggtggctatagaaatattaagagttgaagtgacactcctctcccagagg
tcctggattcaagtctaagacttataaccctctgtatgtaatctagctcc
aaatatctgatatcctgttctaacccctgtaggtgtctgtactcatgacc
acacacatgaccacacacacacacacacacacacacacacacacacacat
tcacatttaacataaaattaaaacataaaataaaacaacataagatgagc
aatgacggataatattctgaacaacaattgtcagtacagaagatcagcct
tttattttaaaacaaaaccaaaaaaaaaaaaactatgcattcttcaattt
agtaaatatgtaaatggacatgcatgggtttccgtgtttaaaggttagat
tgactcacttttttatgatttatgcagataggacactggatggacaccag
tgctcatttgcatccaaactttcattccctagacatcccaagatctgtca
cataaactaaacctcctgtccattgtcggctatgaagcatcacggtgaac
ctgttacactattttccagaaagttggccattgctgagaatgcagctagg
aaacaaaaggaccttttttatgtattgcttctaatttaatgacctatatt
atgcaacttagcgagtacttgagatatatgcccttccatggcaaaatgcg
atatctttctgccaacgagggatttagaggtcaaacttatttttaaacag
aaaaatttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23439165_23440242
seq2: B6Ng01-037F07.b_49_1128 (reverse)

seq1  TTCTCTCTTTTTTTTTTGAAATCTTCTCTTTTGTTACTAAC-AAAAATAT  49
      ||||||||||||||| || ||| ||||| |||||||| ||| ||||||  
seq2  TTCTCTCTTTTTTTTGTGGAATTTTCTC-TTTGTTACAAACAAAAAATTA  49

seq1  TTCTA-CTTTGTTTGA-GTCATAATATTCACTATGTACATATTTTCCTCT  97
      ||||| |||||||||| || ||||||| ||||||||||||| ||||||||
seq2  TTCTACCTTTGTTTGAGGTAATAATATCCACTATGTACATA-TTTCCTCT  98

seq1  GTTCTTCCTTGTGTTAGACTTCTAGAGCAATTAAAATAAATATGATT-AG  146
      ||||| |||||||| |||| |||||||||| |||||||||||||||| ||
seq2  GTTCTCCCTTGTGTAAGACATCTAGAGCAA-TAAAATAAATATGATTAAG  147

seq1  TTTCCAAAACTTACTGTACATTTTAATTAGTAAAATTATGTT-ACTAATT  195
      |||||||||||| ||||||||||||||||||||||||||||| |||||||
seq2  TTTCCAAAACTTTCTGTACATTTTAATTAGTAAAATTATGTTAACTAATT  197

seq1  ATTTAATTGATATTTCCAAAGCTGTTTGATGCTCACTGCATTGATACATT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTGATATTTCCAAAGCTGTTTGATGCTCACTGCATTGATACATT  247

seq1  TTAAACTCCATAAAAAAACCCACACACTTAGATTGAGTTTTGCCAATCTA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTCCATAAAAAAACCCACACACTTAGATTGAGTTTTGCCAATCTA  297

seq1  CCATGACTAGCCTCAGCACTCTCATTTTCTACAAGAATTACATAGGGCTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACTAGCCTCAGCACTCTCATTTTCTACAAGAATTACATAGGGCTA  347

seq1  TGAGAGTTTATGAAAGTAAGAAACTATATTGACAATGAAAAATCAAATTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTTTATGAAAGTAAGAAACTATATTGACAATGAAAAATCAAATTT  397

seq1  AGATTAAAATCTTGAAAAAAAATGATTTCATCTTCGTGTTGCTTAATACA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAAATCTTGAAAAAAAATGATTTCATCTTCGTGTTGCTTAATACA  447

seq1  GCTGTCTCTTTCATTCCAGAAAGGATAAAAATCCATGGTTAACTATTTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTCTTTCATTCCAGAAAGGATAAAAATCCATGGTTAACTATTTTT  497

seq1  ATAGGCAACACAAGTAAATAGCAGTAGTGTCATAATGAGTGAGTCACACA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCAACACAAGTAAATAGCAGTAGTGTCATAATGAGTGAGTCACACA  547

seq1  TCCTGTTTTATTGACTTCAGTAACTTCAGATAATGTAAAATCTACAACGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTTTATTGACTTCAGTAACTTCAGATAATGTAAAATCTACAACGA  597

seq1  CTGGCTATAAATAATTACAAGACATCAGTATTTAGGAGTCTGTGATAAGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTATAAATAATTACAAGACATCAGTATTTAGGAGTCTGTGATAAGC  647

seq1  CTGTGGCTAGAAGGATTTGACATCAAACCCAATATCCAATGTCCAATACC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCTAGAAGGATTTGACATCAAACCCAATATCCAATGTCCAATACC  697

seq1  TAAAAGACACATGGTAGAACAAGGAAACCGTCTCCTACAAGTTGTCTTTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGACACATGGTAGAACAAGGAAACCGTCTCCTACAAGTTGTCTTTT  747

seq1  CACACCCACATGCATGCTAGAGCATGCCAAATCCTCATAAATATACCCAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCACATGCATGCTAGAGCATGCCAAATCCTCATAAATATACCCAC  797

seq1  ATATAAATGCAAAGTAAACAAATATGTATGTACAATCTTTTATAAAAGGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATGCAAAGTAAACAAATATGTATGTACAATCTTTTATAAAAGGA  847

seq1  AGTGTTGGACTATTTAATATTCTAATACTTAAGAATCATCTTATATAAAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGGACTATTTAATATTCTAATACTTAAGAATCATCTTATATAAAC  897

seq1  AGCTGTTTGAAACAAACTGACACATGTGGACATATGAAGACTTATTTCAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTTGAAACAAACTGACACATGTGGACATATGAAGACTTATTTCAA  947

seq1  TTTTATTTGAAACAGCATTCAATATGCAACTTCGAAATTTATAGGGAAAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGAAACAGCATTCAATATGCAACTTCGAAATTTATAGGGAAAG  997

seq1  AAAAATCAATACTCAAGTCATCTGAAGTTACCTGGTATCTTAAAACTTAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAATACTCAAGTCATCTGAAGTTACCTGGTATCTTAAAACTTAC  1047

seq1  ATTATTCACATAAAGTTAATGTGAGAAGAATTC  1078
      |||||||||||||||||||||||||||||||||
seq2  ATTATTCACATAAAGTTAATGTGAGAAGAATTC  1080