BAC Information

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BAC

Clone NameB6Ng01-039G12
Chromosome15 (Build37)
Map Location 76,303,098 - 76,411,191
singlet/doubletdoublet
Overlap geneBop1, Hsf1, Dgat1, Scrt1, LOC666497, EG666504, Fbxl6, Gpr172b, Adck5
Upstream geneLy6h, Gpihbp1, Zfp41, 2810039B14Rik, Top1mt, Rhpn1, Mafa, Zc3h3, LOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl, Tsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina, Spatc1, LOC100041269, Oplah, Exosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5, Scx
Downstream geneCpsf1, Slc39a4, Vps28, Nfkbil2, Cyhr1, Kifc2, Foxh1, Ppp1r16a, Gpt1, Mfsd3, Recql4, Lrrc14, Lrrc24, C030006K11Rik, D15Wsu169e, Zfp251, Zfp7, Commd5, Rpl8, Zfp647, 1110038F14Rik, Mb, Apol6, Rbm9, LOC100042318, Apol3, BC020489, BC085284, LOC624454, EG666639, 9030421J09Rik, EG626615, 2210421G13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039G12.bB6Ng01-039G12.g
ACCDH866685DH866686
length1,119660
definitionDH866685|Mus musculus domesticus DNA, BAC clone: B6Ng01-039G12, 5' end.DH866686|Mus musculus domesticus DNA, BAC clone: B6Ng01-039G12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,410,072 - 76,411,191)(76,303,098 - 76,303,756)
sequence
gaattcactctgtagaccaggctggcctcgaactcagaaatcctcctgcc
tctgcctcccaagtgctgggattaaaggcgtgcaccaccacgcccggctt
ttctttccttttttcttttttttttttttaatatttatttatttatttat
tatatgtaaatacactgtagctgtcctcagacactccagaagagggagtc
agatcttgttatggatggttgtgagccaccatgtggttgctgggatttga
actcctcacctttggaagagcagtcgggtgctcttacccacagagccatc
tcaccagcccccggcttttcttttcttctcttttcttctcttctcttttc
tttctttttcccctgagacagggtttctttatgtagccctgtgtcctgga
ctccctctgtggaccaggctgacctcaaactcaaaagagatctgcctgcc
tctgcctcccacatgctggaattaaaaggtgtgagtgtccaccacccacc
tcctgctgcttttccaacaggggaaaaaaaaagttttcttctctgaaaag
tgagaccatttaccacacaagcagacagtcacaccctgagaatgcagaaa
gactttcactacaactggggccgggatgggactggctgagaacttcaaag
gggccactgtctcaggaaggtcactgccgagtacacagaagcacgcagac
agatgccatgcacaaactgctaggaacagaccagaagctgagggaataag
tcaggctagaaacagctacctgagacaacagaagccaggacacctcacac
actgcagctcttcccgggctcacaaaatcctgcccagagccataggctga
accgagcaggaaaagtaccttatgccagggctgagcgggaagggcctgcg
gacagggccctatgctgacttcaaagaggcagcccagagctccaagctga
gagagctcactgtttaggaccaaactgtccacccaaaaaaggtaacatgt
tcttcagaaagacccaaagcagtgccaggagctttgtctgaaaagaagcc
gtgctaacctttgccagcataatgtcaatggacgccttgggttttcttgg
tgacataggaatctagatg
gaattcctggtcccagacacccacagctccaaactccacactccaccaga
tggcgctaacacttgatctccaagcctgtcaagatacttcctagtagcta
atctctgctatgccccagagcatactgcggaccccagcaaggcattcttg
ctagaggcaacactaagtcagaactcagaactctccagttaatgtcaggg
ctattaccttttcttacattcttgcatgtcaaaagtatgaagcagtgaga
aaacggggtgggcgatgggggtggaggggttatgatacacagacggacag
cacaccatacacatacctcaacataaatgttttaaaatttgttttatttt
atgtgtatgcatgtttgcctgcatgtatgtctgtgcactacatgcctgct
tggtccttgtggaggctagaagagggcactggatctaaaactggagtgac
gggtggttgtgaactaccattagaggtactggcaatcaaacccaggtcct
ctggaagaacagagagtgttctgaaccagtgagccatctctgcagtactc
tctcaaatatacgctttttaaaaagcaaaaccgcccattatagtggcaca
tgcctttaattccagctcttgggaggcagagatgggtggatctcaaagtc
caaggccagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_76410072_76411191
seq2: B6Ng01-039G12.b_46_1163 (reverse)

seq1  CATCTAGATTCCTATGTCACC-AGAAAACCCAAGGCGT-CACTGACAACT  48
      ||||||||||||||||||||| |||||||||||||||| || |||||  |
seq2  CATCTAGATTCCTATGTCACCAAGAAAACCCAAGGCGTCCATTGACA--T  48

seq1  AATGCTGGGCAGAGG-TAGCACCGGCTTCTTTTCAGACAAAGCTCCTGGC  97
       ||||| |||| ||| ||||| ||||||||||||||||||||||||||||
seq2  TATGCT-GGCAAAGGTTAGCA-CGGCTTCTTTTCAGACAAAGCTCCTGGC  96

seq1  ACTGCTCTGGGTCTTTCTGAAGAACATGTTACCTTTTTTGGGTGGACAGT  147
      |||||| |||||||||||||||||||||||||||||||||||||||||| 
seq2  ACTGCTTTGGGTCTTTCTGAAGAACATGTTACCTTTTTTGGGTGGACAG-  145

seq1  TTTGGTCCTAAACAGTGAGCTCTCTCAGCTTGGAGCTCTGGGCTGCCTCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCCTAAACAGTGAGCTCTCTCAGCTTGGAGCTCTGGGCTGCCTCT  195

seq1  TTGAAGTCAGCATAGGGCCCTGTCCGCAGGCCCTTCCCGCTCAGCCCTGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTCAGCATAGGGCCCTGTCCGCAGGCCCTTCCCGCTCAGCCCTGG  245

seq1  CATAAGGTACTTTTCCTGCTCGGTTCAGCCTATGGCTCTGGGCAGGATTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGTACTTTTCCTGCTCGGTTCAGCCTATGGCTCTGGGCAGGATTT  295

seq1  TGTGAGCCCGGGAAGAGCTGCAGTGTGTGAGGTGTCCTGGCTTCTGTTGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCCCGGGAAGAGCTGCAGTGTGTGAGGTGTCCTGGCTTCTGTTGT  345

seq1  CTCAGGTAGCTGTTTCTAGCCTGACTTATTCCCTCAGCTTCTGGTCTGTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTAGCTGTTTCTAGCCTGACTTATTCCCTCAGCTTCTGGTCTGTT  395

seq1  CCTAGCAGTTTGTGCATGGCATCTGTCTGCGTGCTTCTGTGTACTCGGCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCAGTTTGTGCATGGCATCTGTCTGCGTGCTTCTGTGTACTCGGCA  445

seq1  GTGACCTTCCTGAGACAGTGGCCCCTTTGAAGTTCTCAGCCAGTCCCATC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCTTCCTGAGACAGTGGCCCCTTTGAAGTTCTCAGCCAGTCCCATC  495

seq1  CCGGCCCCAGTTGTAGTGAAAGTCTTTCTGCATTCTCAGGGTGTGACTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCCCCAGTTGTAGTGAAAGTCTTTCTGCATTCTCAGGGTGTGACTGT  545

seq1  CTGCTTGTGTGGTAAATGGTCTCACTTTTCAGAGAAGAAAACTTTTTTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGTGTGGTAAATGGTCTCACTTTTCAGAGAAGAAAACTTTTTTTT  595

seq1  TCCCCTGTTGGAAAAGCAGCAGGAGGTGGGTGGTGGACACTCACACCTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGTTGGAAAAGCAGCAGGAGGTGGGTGGTGGACACTCACACCTTT  645

seq1  TAATTCCAGCATGTGGGAGGCAGAGGCAGGCAGATCTCTTTTGAGTTTGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCAGCATGTGGGAGGCAGAGGCAGGCAGATCTCTTTTGAGTTTGA  695

seq1  GGTCAGCCTGGTCCACAGAGGGAGTCCAGGACACAGGGCTACATAAAGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCCTGGTCCACAGAGGGAGTCCAGGACACAGGGCTACATAAAGAA  745

seq1  ACCCTGTCTCAGGGGAAAAAGAAAGAAAAGAGAAGAGAAGAAAAGAGAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCTCAGGGGAAAAAGAAAGAAAAGAGAAGAGAAGAAAAGAGAAG  795

seq1  AAAAGAAAAGCCGGGGGCTGGTGAGATGGCTCTGTGGGTAAGAGCACCCG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAGCCGGGGGCTGGTGAGATGGCTCTGTGGGTAAGAGCACCCG  845

seq1  ACTGCTCTTCCAAAGGTGAGGAGTTCAAATCCCAGCAACCACATGGTGGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCTTCCAAAGGTGAGGAGTTCAAATCCCAGCAACCACATGGTGGC  895

seq1  TCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGAGTGTCTGAGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGAGTGTCTGAGG  945

seq1  ACAGCTACAGTGTATTTACATATAATAAATAAATAAATAAATATTAAAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTACAGTGTATTTACATATAATAAATAAATAAATAAATATTAAAAA  995

seq1  AAAAAAAAAGAAAAAAGGAAAGAAAAGCCGGGCGTGGTGGTGCACGCCTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGAAAAAAGGAAAGAAAAGCCGGGCGTGGTGGTGCACGCCTT  1045

seq1  TAATCCCAGCACTTGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAGCACTTGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGC  1095

seq1  CAGCCTGGTCTACAGAGTGAATT  1120
      |||||||||||||||||||||||
seq2  CAGCCTGGTCTACAGAGTGAATT  1118

seq1: chr15_76303098_76303756
seq2: B6Ng01-039G12.g_64_723

seq1  GAATTCCTGGTCCCAGACACCCACAGCTCCAAACTCCACACTCCACCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGTCCCAGACACCCACAGCTCCAAACTCCACACTCCACCAGA  50

seq1  TGGCGCTAACACTTGATCTCCAAGCCTGTCAAGATACTTCCTAGTAGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGCTAACACTTGATCTCCAAGCCTGTCAAGATACTTCCTAGTAGCTA  100

seq1  ATCTCTGCTATGCCCCAGAGCATACTGCGGACCCCAGCAAGGCATTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGCTATGCCCCAGAGCATACTGCGGACCCCAGCAAGGCATTCTTG  150

seq1  CTAGAGGCAACACTAAGTCAGAACTCAGAACTCTCCAGTTAATGTCAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGGCAACACTAAGTCAGAACTCAGAACTCTCCAGTTAATGTCAGGG  200

seq1  CTATTACCTTTTCTTACATTCTTGCATGTCAAAAGTATGAAGCAGTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACCTTTTCTTACATTCTTGCATGTCAAAAGTATGAAGCAGTGAGA  250

seq1  AAACGGGGTGGGCGATGGGGGTGGAGGGGTTATGATACACAGACGGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGGGTGGGCGATGGGGGTGGAGGGGTTATGATACACAGACGGACAG  300

seq1  CACACCATACACATACCTCAACATAAATGTTTTAAAATTTGTTTTATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCATACACATACCTCAACATAAATGTTTTAAAATTTGTTTTATTTT  350

seq1  ATGTGTATGCATGTTTGCCTGCATGTATGTCTGTGCACTACATGCCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATGCATGTTTGCCTGCATGTATGTCTGTGCACTACATGCCTGCT  400

seq1  TGGTCCTTGTGGAGGCTAGAAGAGGGCACTGGATCTAAAACTGGAGTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTTGTGGAGGCTAGAAGAGGGCACTGGATCTAAAACTGGAGTGAC  450

seq1  GGGTGGTTGTGAACTACCATTAGAGGTACTGGCAATCAAACCCAGGTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTTGTGAACTACCATTAGAGGTACTGGCAATCAAACCCAGGTCCT  500

seq1  CTGGAAGAACAGAGAGTGTTCTGAACCAGTGAGCCATCTCTGCAGTACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAACAGAGAGTGTTCTGAACCAGTGAGCCATCTCTGCAGTACTC  550

seq1  TCTCAAATATACGCTTTTTAAAAAGCAAAACCGCCCATTATAGTGGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAATATACGCTTTTTAAAAAGCAAAACCGCCCATTATAGTGGCACA  600

seq1  TGCCTTTAATTCCAGCTCTTGGGAGGCAGAGATGGGTGGATCTC-AAGTC  649
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGCCTTTAATTCCAGCTCTTGGGAGGCAGAGATGGGTGGATCTCAAAGTC  650

seq1  CAAGGCCAGC  659
      ||||||||||
seq2  CAAGGCCAGC  660