BAC Information

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BAC

Clone NameB6Ng01-040P11
Chromosome15 (Build37)
Map Location 22,866,111 - 22,867,183
singlet/doubletsinglet
Overlap geneCdh18
Upstream geneEG545091
Downstream geneLOC624863
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040P11.bB6Ng01-040P11.g
ACCDH867771DH867772
length7701,142
definitionDH867771|Mus musculus domesticus DNA, BAC clone: B6Ng01-040P11, 5' end.DH867772|Mus musculus domesticus DNA, BAC clone: B6Ng01-040P11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcccatgggccttccttgttatatgacttctttgggtctgtgga
ttttaatgtggttatcctctactttatggctactattcagttatcagtga
atacatacaatgtgtatgcttttgtgtctaggttacctctcttaggaggg
tactttctactttgatccatttgcttgcaaaatgagtgatgtccttgttt
ttaatagctgaatagtattccattgaataaatgaagcacattttctttat
gcattctttgattgagggacatctggttgtttccacttgctggctattat
gaatgaagttcctatgaacataatcgagcaaatatcattatggtgtggta
gaacctcttttggatatatgcccaggagtagtatagctaggatttgaagt
agaattgtctccagttttctgagaaatcaccaaattgatttacagagtgg
gtaaattttttccactcccattagtgatggaggattgttcaacatgctct
gcacccttggcagcacgagtggtcaattgagtttttttgattttatccat
tctattgggtgtaagatgaaatctcataatcattttgatttgaattttct
gatgaacatttctttgattactaaattactctattctctagctgcatatg
aatcagaagatggcctagtcagccatcagtggaaagagaggcccattggt
cgtgcaaactttatatgcctctgtacaggggaacgacagggccaagaagt
gggagtgggggggggagagt

gaattcagtaagaaggttacctattcagtaacattcaaatttacttctag
tagagtccttgaaactaattaggcatacaaagaaaggagccagaatatct
tggggctggtctgcagagtgtttacttggaacaatagccagtcttaccca
gacaagggaattcacaatggcctagcaaataggtgggtttaccatgaaag
agttagggaatccccctgagacaggttccttcactaggcccaaaagaaat
aacataatcaggcatttactagaacctctagtggtgagcttaacaataga
gtagcattacacctggcttccttcttagtggcaggggcctggtccccgcc
ttcttttgatgtatacattccttttgtattgtgtcactgtaaattggcag
atgtatcttgcctggtttcttgtcactcttctgtataaaaagtatgatgc
tcaacttgaaaaattacattcagattctacacaatcttgtgtcttctttt
gtttgtcattcattcaccaactccttgtccacctgcaactagagacccat
tctatgcagacagggaccaaaaagggtctgtggcatggatggaggcttgt
ctatcccttgtagtgtcaaatggttccctggttatgactatgaaagcaag
gagttcaatgtagaggtacattgtaagcacatcgtgggtcaggacaaggt
agactacatgcgctacctaatggaggaagatgaaggtacgtataagaaac
tgttctcttagtacatcaagaataataactccagacatgatggaggaaat
gtgtaagaaagctcatgctgttgtccaggagaatacagtctatgagtaga
aacttaagagagaagtgaagaagaggggaatagtccacaaatgtcttgcc
cagaagaacacctggttgctcaaagaagccagctttctcagagctcagga
actggctggtgaaagctaaagcaattttctattgaggatttttatttcat
aaagaaattacattgatcagaacaaaaagaaatgtgataattacaaataa
tttatattatatgtttgtaacccttgctactctgcagttcatgccgtatg
caatatccgagctcctaaatgtggatctcggagggtactgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_22866111_22867183
seq2: B6Ng01-040P11.g_157_1211

seq1  AGCCAGAATATCTTGGGGCTGGTCTGCAGAGTGTTTACTTGGAACAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAATATCTTGGGGCTGGTCTGCAGAGTGTTTACTTGGAACAATAG  50

seq1  CCAGTCTTACCCAGACAAGGGAATTCACAATGGCCTAGCAAATAGGTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTTACCCAGACAAGGGAATTCACAATGGCCTAGCAAATAGGTGGG  100

seq1  TTTACCATGAAAGAGTTAGGGAATCCCCCTGAGACAGGTTCCTTCACTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCATGAAAGAGTTAGGGAATCCCCCTGAGACAGGTTCCTTCACTAG  150

seq1  GCCCAAAAGAAATAACATAATCAGGCATTTACTAGAACCTCTAGTGGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAAAGAAATAACATAATCAGGCATTTACTAGAACCTCTAGTGGTGA  200

seq1  GCTTAACAATAGAGTAGCATTACACCTGGCTTCCTTCTTAGTGGCAGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAACAATAGAGTAGCATTACACCTGGCTTCCTTCTTAGTGGCAGGGG  250

seq1  CCTGGTCCCCGCCTTCTTTTGATGTATACATTCCTTTTGTATTGTGTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCCCCGCCTTCTTTTGATGTATACATTCCTTTTGTATTGTGTCAC  300

seq1  TGTAAATTGGCAGATGTATCTTGCCTGGTTTCTTGTCACTCTTCTGTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTGGCAGATGTATCTTGCCTGGTTTCTTGTCACTCTTCTGTATA  350

seq1  AAAAGTATGATGCTCAACTTGAAAAATTACATTCAGATTCTACACAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTATGATGCTCAACTTGAAAAATTACATTCAGATTCTACACAATCT  400

seq1  TGTGTCTTCTTTTGTTTGTCATTCATTCACCAACTCCTTGTCCACCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTTCTTTTGTTTGTCATTCATTCACCAACTCCTTGTCCACCTGCA  450

seq1  ACTAGAGACCCATTCTATGCAGACAGGGACCAAAAAGGGTCTGTGGCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGACCCATTCTATGCAGACAGGGACCAAAAAGGGTCTGTGGCATG  500

seq1  GATGGAGGCTTGTCTATCCCTTGTAGTGTCAAATGGTTCCCTGGTTATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGGCTTGTCTATCCCTTGTAGTGTCAAATGGTTCCCTGGTTATGA  550

seq1  CTATGAAAGCAAGGAGTTCAATGTAGAGGTACATTGTAAGCACATCGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAAAGCAAGGAGTTCAATGTAGAGGTACATTGTAAGCACATCGTGG  600

seq1  GTCAGGACAAGGTAGACTACATGCGCTACCTAATGGAGGAAGATGAAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGACAAGGTAGACTACATGCGCTACCTAATGGAGGAAGATGAAGGT  650

seq1  ACGTATAAGAAACTGTTCTCTTAGTACATCAAGAATAATAACTCCAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTATAAGAAACTGTTCTCTTAGTACATCAAGAATAATAACTCCAGACA  700

seq1  TGATGGAGGAAATGTGTAAGAAAGCTCATGCTGTTGTCCAGGAGAATACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGAGGAAATGTGTAAGAAAGCTCATGCTGTTGTCCAGGAGAATACA  750

seq1  GTCTATGAGTAGAAACTTAAGAGAGAAGTGAAGAAGAGGTGGAATAGTCC  800
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTCTATGAGTAGAAACTTAAGAGAGAAGTGAAGAAGAGG-GGAATAGTCC  799

seq1  ACAAATGTCTTGCCCAGAAGAAACACCTGGTTGCTCAAAAGAAGCCAAGC  850
      |||||||||||||||||||| ||||||||||||||| ||||||||| |||
seq2  ACAAATGTCTTGCCCAGAAG-AACACCTGGTTGCTC-AAAGAAGCC-AGC  846

seq1  TTTCTCAGAGCTCAGGAACTGGCTGGTGAAAGCTAAAGCAATTTTCTA-T  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTCTCAGAGCTCAGGAACTGGCTGGTGAAAGCTAAAGCAATTTTCTATT  896

seq1  GAAGATTTTTATTTCATAAAGAAAATAAACATTGATCAAGAACAAAAAGA  949
      || ||||||||||||||||||||| |  ||||||||| ||||||||||||
seq2  GAGGATTTTTATTTCATAAAGAAATT--ACATTGATC-AGAACAAAAAGA  943

seq1  AATGTTGATAATTACAAAATAAATTTATATTATATGTTGTAAACCCTTGC  999
      |||| |||||||||||||   |||||||||||||||||   |||||||||
seq2  AATG-TGATAATTACAAA--TAATTTATATTATATGTTTGTAACCCTTGC  990

seq1  TACCTCTGCAGTACATTGCCGTATGCAAATATTACAGAGCTCTCTTAAAA  1049
      || ||||||||| || |||||||||| |||||  | |||||| ||   ||
seq2  TA-CTCTGCAGTTCA-TGCCGTATGC-AATAT--CCGAGCTC-CT---AA  1031

seq1  ATGTGTATCTCTGAGGGTACTGAT  1073
      ||||| ||||| ||||||||||||
seq2  ATGTGGATCTCGGAGGGTACTGAT  1055


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