BAC Information

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BAC

Clone NameB6Ng01-041O17
Chromosome15 (Build37)
Map Location 61,619,491 - 61,620,449
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
Downstream geneMyc, Pvt1, LOC100040584, H2afy3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041O17.bB6Ng01-041O17.g
ACCDH868441DH868442
length844954
definitionDH868441|Mus musculus domesticus DNA, BAC clone: B6Ng01-041O17, 5' end.DH868442|Mus musculus domesticus DNA, BAC clone: B6Ng01-041O17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcatagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggttaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctc
agaaaattggacatagtactactggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggatggacctggagggcatcatcctgagtgaggtaacacattc
acaaaggaactcacacaatatgtactcactgataagtggatattagccca
aaacctaggatacccaagatataagatacaatttcctaaacacatgaaac
tcaagaaaaattaagactgaagtgtggacactatgcccctccttagaagt
gggaacaaaacacccatggaaggagttacagagacaaagtttggagctga
tatgaaaggatggaccatgttagagactgccttatctagggatccacctc
atattagttttctatatgttgacacattgcatacattttcaaga
gaattctacagtctgaaacattctgaggcatttttgtgcttttctatgta
aaaaacatccaacactttttgccccaatatcaaaatatattttaaaagca
ttttaaatgtcaaaaacactaacagggagagaatatgtaaatttggatat
catggaattaatttcgatttctttttaaaaatgtacttattttttcataa
ttttattcatatctaattgattataatcttcccactatcctccctttaaa
ttgaatccctctttttcctaacaagtctctctccccgtctctctctcctt
caaaccaaatcccctttttctaacaagtctctctcattttctctctttcc
ttcccctataaaccgaatcccttctttttcctaacaagcttctgtctctg
tctctctgtctctctgtctctctgtctctgtctctctgtctgtctctctc
tctctccttcattgtatttagttagggtatcttttatcaacatcagtggg
agatcatttatttgatcaaggacaagggccacaatactggggaatatgac
ttctcttcttccaaaacccaacttactagcctgcctcagggagtggttgg
tcctcataatccccttccccagtcacattgctcattgatgtgctcagcag
atagccactgctgttgggagtttcttggaacattaccactccatcactag
gaaacagcagcgtctcccagcatttatttatcctcctgctcttactttct
tcccatccctctcacacaatgttccctgagcatcagaggggatgacacgg
atatcatgtttaggactgaacactccacaatgatctactttcaccgtgtt
accagttatgaatctcaaatggcattgcctgctgtgaacagaagcttctc
tggctaaggtggtctagctgctctgcacccttacccactgcatcgctgac
gcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_61619491_61620449
seq2: B6Ng01-041O17.g_67_1020 (reverse)

seq1  ACGCGTCAGCGATGGCAGTGGGTAAGGGCTGCAGAGCAGCTAGACCAACC  50
      ||||||||||||| |||||||||||||| ||||||||||||||||| |||
seq2  ACGCGTCAGCGAT-GCAGTGGGTAAGGG-TGCAGAGCAGCTAGACC-ACC  47

seq1  TTAGCCAGAGAAGCTTCTGCTCACAGCAGGCAATGCCCATTTGAGATTCA  100
      ||||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  TTAGCCAGAGAAGCTTCTGTTCACAGCAGGCAATG-CCATTTGAGATTCA  96

seq1  TAACTGGTTAACACGGTGAAAGTAGATCATTGTGGAGTGTTCAGTCCTAA  150
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGG-TAACACGGTGAAAGTAGATCATTGTGGAGTGTTCAGTCCTAA  145

seq1  ACATGATATCCGTGTCATCCCCTCTGATGCTCAGGGAACATTGTGTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATATCCGTGTCATCCCCTCTGATGCTCAGGGAACATTGTGTGAGA  195

seq1  GGGATGGGAAGAAAGTAAGAGCAGGAGGATAAATAAATGCTGGGAGACGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGGAAGAAAGTAAGAGCAGGAGGATAAATAAATGCTGGGAGACGC  245

seq1  TGCTGTTTCCTAGTGATGGAGTGGTAATGTTCCAAGAAACTCCCAACAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTTCCTAGTGATGGAGTGGTAATGTTCCAAGAAACTCCCAACAGC  295

seq1  AGTGGCTATCTGCTGAGCACATCAATGAGCAATGTGACTGGGGAAGGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTATCTGCTGAGCACATCAATGAGCAATGTGACTGGGGAAGGGGA  345

seq1  TTATGAGGACCAACCACTCCCTGAGGCAGGCTAGTAAGTTGGGTTTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGGACCAACCACTCCCTGAGGCAGGCTAGTAAGTTGGGTTTTGGA  395

seq1  AGAAGAGAAGTCATATTCCCCAGTATTGTGGCCCTTGTCCTTGATCAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAAGTCATATTCCCCAGTATTGTGGCCCTTGTCCTTGATCAAAT  445

seq1  AAATGATCTCCCACTGATGTTGATAAAAGATACCCTAACTAAATACAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATCTCCCACTGATGTTGATAAAAGATACCCTAACTAAATACAATG  495

seq1  AAGGAGAGAGAGAGAGACAGACAGAGAGACAGAGACAGAGAGACAGAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGAGAGAGAGACAGACAGAGAGACAGAGACAGAGAGACAGAGAG  545

seq1  ACAGAGAGACAGAGACAGAAGCTTGTTAGGAAAAAGAAGGGATTCGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGACAGAGACAGAAGCTTGTTAGGAAAAAGAAGGGATTCGGTTT  595

seq1  ATAGGGGAAGGAAAGAGAGAAAATGAGAGAGACTTGTTAGAAAAAGGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGAAGGAAAGAGAGAAAATGAGAGAGACTTGTTAGAAAAAGGGGA  645

seq1  TTTGGTTTGAAGGAGAGAGAGACGGGGAGAGAGACTTGTTAGGAAAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTGAAGGAGAGAGAGACGGGGAGAGAGACTTGTTAGGAAAAAGA  695

seq1  GGGATTCAATTTAAAGGGAGGATAGTGGGAAGATTATAATCAATTAGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTCAATTTAAAGGGAGGATAGTGGGAAGATTATAATCAATTAGATA  745

seq1  TGAATAAAATTATGAAAAAATAAGTACATTTTTAAAAAGAAATCGAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAAATTATGAAAAAATAAGTACATTTTTAAAAAGAAATCGAAATT  795

seq1  AATTCCATGATATCCAAATTTACATATTCTCTCCCTGTTAGTGTTTTTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCATGATATCCAAATTTACATATTCTCTCCCTGTTAGTGTTTTTGA  845

seq1  CATTTAAAATGCTTTTAAAATATATTTTGATATTGGGGCAAAAAGTGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAATGCTTTTAAAATATATTTTGATATTGGGGCAAAAAGTGTTG  895

seq1  GATGTTTTTTACATAGAAAAGCACAAAAATGCCTCAGAATGTTTCAGACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTTTTACATAGAAAAGCACAAAAATGCCTCAGAATGTTTCAGACT  945

seq1  GTAGAATTC  959
      |||||||||
seq2  GTAGAATTC  954