BAC Information

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BAC

Clone NameB6Ng01-042O14
Chromosome15 (Build37)
Map Location 60,148,116 - 60,149,265
singlet/doubletsinglet
Overlap genenone
Upstream geneSqle, E430025E21Rik, Nsmce2, Trib1, LOC665602, EG632248, LOC665613, 4933412E24Rik, LOC100040266, LOC623048
Downstream geneLOC211832, LOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042O14.bB6Ng01-042O14.g
ACCDH869136DH869137
length1,1561,120
definitionDH869136|Mus musculus domesticus DNA, BAC clone: B6Ng01-042O14, 5' end.DH869137|Mus musculus domesticus DNA, BAC clone: B6Ng01-042O14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaaat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttttaaaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtagtaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gtccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
gaaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaagtagcaggagctaaagggatctgcaacctatag
gtggaacacatatgactacagtacccggagctctgactctagctgcatta
ttatcaaagatggctagtcgcatcactgaagagagccatgactgcactta
tatgcctagtcaggaacacatgccaaaagggagtgttgtcatggggaagt
atggat
gaattcattgtgaactgtagcagccatgcactttgcataacatggagaac
aaggacacagcacaacatggcagatagaaagctgaggcgaatgatcggaa
aacaacatttagtcagaggagaaagctgccattctttattatggatctgt
aaaaaatatagccaaggtattagcatgagcccataattaagtgggtttta
cctggaattttactttcaaaaagaatccggcatgatttaatgtatatttc
ttgaatttcttccacataccacacactggaaacacacagaacaaatgtaa
tctccactctcatgtaccacactacctgaagtttcaattgcataaaacac
aggcaattagttaatggtctgcactgtgacaagtgtcatactggacataa
taacaaagaactctcagagaatgacaatctgtgaactctgtgtatttact
ctgggtactaatgaaaggaaacagtgacagatttgaaggtaaagataaat
tttaaattaatcaaattaaagaaaatgccagattatttcaagagacaaag
ggaaaagggggatgtggaagcaggttggttgtgttgggacactttggctg
gcatggcctggtactgttttagcattgcacagagcaagtcctgtgcttat
ctcagttgcagctgcattaaggttggtaagtgatcacaggccaatggata
ctgaagtagttgacaccctatgaagcactaaattcgtactgtgtgtgctg
cacaggcataatggataactaaatcagtggagggaactagagagtttcgt
accaacactggatcagctgtcacagagctacattccaatggtcaaaacag
cagctaaaaaatcaagaaggaaatgggaaaggatctgcatatgacattga
cataagcaggataaaaatcaggcagaagataattctccagacagacacag
tgaggatagattcagtgtgagaaaatgtggggcacattgaaagactgatg
aaaataagtgtgaaagacatgatatgaaattagctacagaagaaactaga
tcaaatagatagcagctggtgggatgcattggattatccaaagattgaga
cattgaacctatcaacatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_60148116_60149265
seq2: B6Ng01-042O14.g_67_1186 (reverse)

seq1  ACATGTTTGATAAGGTTCAATGGTCTTTCATTTCTTTTGGGATAAATCCC  50
      ||||| ||||| ||||||||||   | |||  |||||  |||| ||||| 
seq2  ACATG-TTGAT-AGGTTCAATG---TCTCA-ATCTTT--GGAT-AATCC-  40

seq1  AAATGCATCCCCACAGCTTGCTAATCTTATTTGATCTAGTTTCTTCCTGT  100
       ||||||||||  |||| |||| ||| |||||||||||||||||| ||||
seq2  -AATGCATCCCACCAGC-TGCT-ATC-TATTTGATCTAGTTTCTT-CTGT  85

seq1  AGCCCTTAATTTTCATATCATGTCTTTCCACACTTATTTTCATTCAGTCC  150
      |||   ||| ||||||||||||||||| |||||||||||||| ||||| |
seq2  AGC---TAA-TTTCATATCATGTCTTT-CACACTTATTTTCA-TCAGT-C  128

seq1  TTTCAATGTGCCCCACATTTTCTCACACTGAATTCTTATCCTCACTGTTG  200
      |||||||||||||||||||||||||||||||||   ||||||||||| ||
seq2  TTTCAATGTGCCCCACATTTTCTCACACTGAAT--CTATCCTCACTG-TG  175

seq1  TCTGTCTGGAGAATTATCTTCTGCCTTGATTTTTATCCTTGCTTTATGTC  250
      ||||||||||||||||||||||||| |||||||||||| ||| |||||||
seq2  TCTGTCTGGAGAATTATCTTCTGCC-TGATTTTTATCC-TGC-TTATGTC  222

seq1  AATGTCATATGCAGATTCCTTTCCCATTTCCTTCTTGATTTTTTAGCTGC  300
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AATGTCATATGCAGA-TCCTTTCCCATTTCCTTCTTGATTTTTTAGCTGC  271

seq1  TGTTTTGACCATTGGAATGTAAGCTCTGTGACAGCTGATCCAGTGTTGGT  350
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGTTTTGACCATTGGAATGT-AGCTCTGTGACAGCTGATCCAGTGTTGGT  320

seq1  ACGAAACTCTCTAGTTCCCTCCACTGATTTAGTTATCCATTATGCCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAACTCTCTAGTTCCCTCCACTGATTTAGTTATCCATTATGCCTGTG  370

seq1  CAGCACACACAGTACGAATTTAGTGCTTCATAGGGTGTCAACTACTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACACACAGTACGAATTTAGTGCTTCATAGGGTGTCAACTACTTCAG  420

seq1  TATCCATTGGCCTGTGATCACTTACCAACCTTAATGCAGCTGCAACTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATTGGCCTGTGATCACTTACCAACCTTAATGCAGCTGCAACTGAG  470

seq1  ATAAGCACAGGACTTGCTCTGTGCAATGCTAAAACAGTACCAGGCCATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCACAGGACTTGCTCTGTGCAATGCTAAAACAGTACCAGGCCATGC  520

seq1  CAGCCAAAGTGTCCCAACACAACCAACCTGCTTCCACATCCCCCTTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAAGTGTCCCAACACAACCAACCTGCTTCCACATCCCCCTTTTCC  570

seq1  CTTTGTCTCTTGAAATAATCTGGCATTTTCTTTAATTTGATTAATTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTCTTGAAATAATCTGGCATTTTCTTTAATTTGATTAATTTAAA  620

seq1  ATTTATCTTTACCTTCAAATCTGTCACTGTTTCCTTTCATTAGTACCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCTTTACCTTCAAATCTGTCACTGTTTCCTTTCATTAGTACCCAG  670

seq1  AGTAAATACACAGAGTTCACAGATTGTCATTCTCTGAGAGTTCTTTGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATACACAGAGTTCACAGATTGTCATTCTCTGAGAGTTCTTTGTTA  720

seq1  TTATGTCCAGTATGACACTTGTCACAGTGCAGACCATTAACTAATTGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCCAGTATGACACTTGTCACAGTGCAGACCATTAACTAATTGCCT  770

seq1  GTGTTTTATGCAATTGAAACTTCAGGTAGTGTGGTACATGAGAGTGGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTATGCAATTGAAACTTCAGGTAGTGTGGTACATGAGAGTGGAGA  820

seq1  TTACATTTGTTCTGTGTGTTTCCAGTGTGTGGTATGTGGAAGAAATTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTGTTCTGTGTGTTTCCAGTGTGTGGTATGTGGAAGAAATTCAA  870

seq1  GAAATATACATTAAATCATGCCGGATTCTTTTTGAAAGTAAAATTCCAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATACATTAAATCATGCCGGATTCTTTTTGAAAGTAAAATTCCAGG  920

seq1  TAAAACCCACTTAATTATGGGCTCATGCTAATACCTTGGCTATATTTTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCCACTTAATTATGGGCTCATGCTAATACCTTGGCTATATTTTTT  970

seq1  ACAGATCCATAATAAAGAATGGCAGCTTTCTCCTCTGACTAAATGTTGTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCCATAATAAAGAATGGCAGCTTTCTCCTCTGACTAAATGTTGTT  1020

seq1  TTCCGATCATTCGCCTCAGCTTTCTATCTGCCATGTTGTGCTGTGTCCTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGATCATTCGCCTCAGCTTTCTATCTGCCATGTTGTGCTGTGTCCTT  1070

seq1  GTTCTCCATGTTATGCAAAGTGCATGGCTGCTACAGTTCACAATGAATTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCATGTTATGCAAAGTGCATGGCTGCTACAGTTCACAATGAATTC  1120