BAC Information

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BAC

Clone NameB6Ng01-043B03
Chromosome15 (Build37)
Map Location 13,330,855 - 13,331,395
singlet/doubletsinglet
Overlap genenone
Upstream genePdzd2, LOC100040109, 6030458C11Rik, Rnasen, Cdh6, LOC100039907
Downstream geneLOC666686, LOC239338, LOC666708
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043B03.bB6Ng01-043B03.g
ACCDH869248DH869249
length9721,144
definitionDH869248|Mus musculus domesticus DNA, BAC clone: B6Ng01-043B03, 5' end.DH869249|Mus musculus domesticus DNA, BAC clone: B6Ng01-043B03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctggtggaatttttagggtcacttatatatactatcatatcat
ctgcaaaaagtgatattttgacttcttcctttccaatttgtatccccttg
atctccttttgttgtctaattgctctggctaggtttcaagtacaatgttg
aataggtagggagagagtggacagccatgtctagcccctgaatttagtgg
gatttctttcagcttctcaccatttactttgatgttgacaactggtttgc
tgtagattgcttttatcatggttaggtatgggccttgaattcctgatctt
tccaagacttttatcatgaatgggtgttggatttgtcaaatgctttctct
gcatctaatgagatgatcatgtgtttttttgtctttgagtttgtttatat
actggattacattgatggatttccgtatattgaccatccctgcatcactg
ggatggaacctacttggtcaggatggatgattgttttgatgtgttcttgg
attcggttagcgagaacattattgaggatttttgcatcgatattcataag
ggaaattggtctgaagttctctatctttgttgggtctttttgtgggttag
gtataaaagtaattgtggcttcatagaatgagttgggtagagtacatttt
gtttctattttgtggaatagtttgtgaagaactgggattagatcttcttt
gaaggtctgatagaattctgcactaaacccatctgttcctgggttttttt
tggttgggagactattaatgactccttctatttctttaggggatatagga
ctgtttagatcattaacctgatcttgatttaactttggtacctggtatct
gtctagaaacttgtccatttcatccaggttctccagttttgttgagtata
gccttttgtagaaggatctgatgtgtttggaatttcttcaggatctgttg
tttaattcccttttcatttctg
gaattctttgttcagttctgagctccattttttaatggggttagtgatta
tctggagtccaccttcttgagttctttatgtatattggatattagtcccc
tacctgatttaggataggtaaagatcctttcccaatttgttggtggtctt
tttgtcttattgatggtgtcttttgccttgcagaagctttgcagtttcat
gaggtcccatttgtcaattctcgatcttacagcacaagccattgctgttc
tattcaggaattttccccctgtgcccctattttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtggagttccttgat
ccgcttagatttgaccttagtacaaggagataggtatggatcgattcaca
ttcttctaaatgataacaactagttgtgccagcaccatttgttgaaaata
ctgtttttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgcgttcatttctgggtcttcaattctattccattggc
ctacttgtttgtcactataccagtaccatgaagtttttatcacaattgct
ctgtagtaaagctttaggtcagggatggtgattccagcagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttaatccagatga
atttgcagatttctctttctaattcgttgaagaattgatttggaattttg
atggggattgcattgaatctgtagattgcttttggcaatatagccatttt
tacaatgtttattctgccaatccatgagcatgggagatctttccatcttc
tgagatgttctttaaatctttcttcagagacttgaatttttcgtcataca
gatctttcacttccttagttagagttacaccagatattttatatatttgt
gactattgaggagatgtgtttccctaatttccttctctgtctgtttatct
tggtgtagagaaatgctattgacttggttgagtagttttatatccagcta
ccttcactgaagctgtttatcaggtttaggatttctctggggattttagg
cactcattatacctacatcatccgcaaagagggatgtattgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_13330855_13331395
seq2: B6Ng01-043B03.b_476_1015 (reverse)

seq1  CAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACA  50
      |||||||||||||||| |   ||||||||||||||||||||| | |||||
seq2  CAGAAATGAAAAGGGA-ATTAAACAACAGATCCTGAAGAAATTCCAAACA  49

seq1  TCATAAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAGAACCTG  100
       ||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  -CATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAGAACCTG  98

seq1  GATAAAATGGACAAGTTTCTAGACAGATACAAGGTACCAAAGTTAAATCA  150
      ||| |||||||||||||||||||||||||| |||||||||||||||||||
seq2  GATGAAATGGACAAGTTTCTAGACAGATACCAGGTACCAAAGTTAAATCA  148

seq1  AGATCAGGTTAATGATCTAAACAGTCCTATATCGCCTAAAGATATAGAAA  200
      ||||||||||||||||||||||||||||||||| |||||||| |||||| 
seq2  AGATCAGGTTAATGATCTAAACAGTCCTATATCCCCTAAAGAAATAGAAG  198

seq1  CAGTCATTAATAGTCTCCCAACC-AAAAAAGCCCAGGACTAGATGGGTTT  249
       |||||||||||||||||||||| |||||| |||||||  ||||||||||
seq2  GAGTCATTAATAGTCTCCCAACCAAAAAAAACCCAGGAACAGATGGGTTT  248

seq1  AGTGCAGAGTTCTATCAGACCTTCAAAGAATATCTAATCCCAGTTCTTCA  299
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  AGTGCAGAATTCTATCAGACCTTCAAAGAAGATCTAATCCCAGTTCTTCA  298

seq1  CAAACTATTCTACAAAATAGAAACAGAAGGTACTCTACCCAACTCATTCT  349
      |||||||||| |||||||||||||| || |||||||||||||||||||||
seq2  CAAACTATTCCACAAAATAGAAACAAAATGTACTCTACCCAACTCATTCT  348

seq1  ATGAAGCCACAATTAGTCTGATACCTAAACCACAAAAAGACCCAACAAAG  399
      ||||||||||||||| | | |||||||| |||||||||||||||||||||
seq2  ATGAAGCCACAATTACTTTTATACCTAACCCACAAAAAGACCCAACAAAG  398

seq1  ATAGAGAACTTCAGACCAATTTCCCTTATGAATATCGATGCAAAAATACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATAGAGAACTTCAGACCAATTTCCCTTATGAATATCGATGCAAAAATCCT  448

seq1  CAATAAAGTTTTCGCTTACCGAATCCAAGAACACATCAAAACAATCATCC  499
      |||||| ||| ||||| |||||||||||||||||||||||||||||||||
seq2  CAATAATGTTCTCGCTAACCGAATCCAAGAACACATCAAAACAATCATCC  498

seq1  ATCCTGACCAAGTAGGTTTCATCCCAGGGATGCAGGGATGGT  541
      |||||||||||||||||| |||||||| ||||||||||||||
seq2  ATCCTGACCAAGTAGGTTCCATCCCAGTGATGCAGGGATGGT  540