BAC Information

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BAC

Clone NameB6Ng01-043P20
Chromosome15 (Build37)
Map Location 23,693,079 - 23,694,262
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh18, LOC624863
Downstream geneLOC666989, LOC666999, LOC100040492, LOC100040499
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043P20.bB6Ng01-043P20.g
ACCDH869880DH869881
length1,17392
definitionDH869880|Mus musculus domesticus DNA, BAC clone: B6Ng01-043P20, 5' end.DH869881|Mus musculus domesticus DNA, BAC clone: B6Ng01-043P20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcttatgaagtaataattaaaaattattttagagtacatcata
aacaaatgccaccttgaagttaataaaaattaactacccctccaggtttt
tgaacactaggctacgtttctctttctcgtgtctgtgtgtgtctgtgtgt
gtgtgtccatttgtatctgtgtgcgtctaagaaacagatgattttgtcag
gtgtaatctctgaacaaaagaaaatgtaactaaaatatttaagtcatact
atcatacccaatgtgcttcatccagtaacaaacatagacaaagataagat
gccctagggcaccacgagtttaggattcttaccccactcctacacaaata
ttactccaatcgcttacattccagttttaagaaaattcctctgtgattct
tcttttcctagggagccttctccattctttatccagatttttcagaccgc
cttttttcctaattaaaattcagttgagaaatcctgtcagttttaagaag
atataatctgttaacttttggccttcatgtatatttgattccactttaac
catagtacttgctctccttagggcttaaagacttaattcacttactagga
atcaatgtgtgatttgggaaagtggggaaacaaaggagaaaattagttca
tcaacgacagaatctgataggaaattatgccaaggggtaaggtaattagt
gtcgtgtattgtcagtcttccccaggattaggcccacatataataaagtg
ttttgaaattaagaagtccgtatgggacaatttccaatgtgacatactgt
tacctttcacgatattattacaaagagtggaatgtgcataaaataagagc
aagatcttttttgacccatttcatgacttaaagagactttaagttattat
ctgtttagatatggaaactataacaaattgtcattgaatattacaaataa
ttggtctgtttttttttaaatgctgtcattaaatcagcaaaggtacaaag
ggcaaaactggactcatttctaataggaggactaatgtatcttagatgag
tgagaacaatctgttttgttttaacaggttcagctgtcttattataaaga
tcaaaagggaaattggaaactcctaacgatggatacatccgtcattgttc
atcagaatgagatacatggtaca

aagtgtcagggttgggagataaccagaggggacctcatctgctcagagga
gaaggggaggggcaatgggggatggattggggaggggcacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23693079_23694262
seq2: B6Ng01-043P20.b_46_1218

seq1  GAATTCATCTTATGAAGTAATAATTAAAAATTATTTTAGAGTACATCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTTATGAAGTAATAATTAAAAATTATTTTAGAGTACATCATA  50

seq1  AACAAATGCCACCTTGAAGTTAATAAAAATTAACTACCCCTCCAGGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATGCCACCTTGAAGTTAATAAAAATTAACTACCCCTCCAGGTTTT  100

seq1  TGAACACTAGGCTACGTTTCTCTTTCTCGTGTCTGTGTGTGTCTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACTAGGCTACGTTTCTCTTTCTCGTGTCTGTGTGTGTCTGTGTGT  150

seq1  GTGTGTCCATTTGTATCTGTGTGCGTCTAAGAAACAGATGATTTTGTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCCATTTGTATCTGTGTGCGTCTAAGAAACAGATGATTTTGTCAG  200

seq1  GTGTAATCTCTGAACAAAAGAAAATGTAACTAAAATATTTAAGTCATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATCTCTGAACAAAAGAAAATGTAACTAAAATATTTAAGTCATACT  250

seq1  ATCATACCCAATGTGCTTCATCCAGTAACAAACATAGACAAAGATAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACCCAATGTGCTTCATCCAGTAACAAACATAGACAAAGATAAGAT  300

seq1  GCCCTAGGGCACCACGAGTTTAGGATTCTTACCCCACTCCTACACAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTAGGGCACCACGAGTTTAGGATTCTTACCCCACTCCTACACAAATA  350

seq1  TTACTCCAATCGCTTACATTCCAGTTTTAAGAAAATTCCTCTGTGATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCAATCGCTTACATTCCAGTTTTAAGAAAATTCCTCTGTGATTCT  400

seq1  TCTTTTCCTAGGGAGCCTTCTCCATTCTTTATCCAGATTTTTCAGACCGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCCTAGGGAGCCTTCTCCATTCTTTATCCAGATTTTTCAGACCGC  450

seq1  CTTTTTTCCTAATTAAAATTCAGTTGAGAAATCCTGTCAGTTTTAAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTCCTAATTAAAATTCAGTTGAGAAATCCTGTCAGTTTTAAGAAG  500

seq1  ATATAATCTGTTAACTTTTGGCCTTCATGTATATTTGATTCCACTTTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCTGTTAACTTTTGGCCTTCATGTATATTTGATTCCACTTTAAC  550

seq1  CATAGTACTTGCTCTCCTTAGGGCTTAAAGACTTAATTCACTTACTAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTACTTGCTCTCCTTAGGGCTTAAAGACTTAATTCACTTACTAGGA  600

seq1  ATCAATGTGTGATTTGGGAAAGTGGGGAAACAAAGGAGAAAATTAGTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGTGTGATTTGGGAAAGTGGGGAAACAAAGGAGAAAATTAGTTCA  650

seq1  TCAACGACAGAATCTGATAGGAAATTATGCCAAGGGGTAAGGTAATTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGACAGAATCTGATAGGAAATTATGCCAAGGGGTAAGGTAATTAGT  700

seq1  GTCGTGTATTGTCAGTCTTCCCCAGGATTAGGCCCACATATAATAAAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTGTATTGTCAGTCTTCCCCAGGATTAGGCCCACATATAATAAAGTG  750

seq1  TTTTGAAATTAAGAAGTCCGTATGGGACAATTTCCAATGTGACATACTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAATTAAGAAGTCCGTATGGGACAATTTCCAATGTGACATACTGT  800

seq1  TACCTTTCAGGATATTATTACAAAGAGTGGAATGTGCATAAAATAAGAGC  850
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTCACGATATTATTACAAAGAGTGGAATGTGCATAAAATAAGAGC  850

seq1  AAGATCTTTTTTGACCCATTTCATGACTTAAAGAGACTTTAAGTTATTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTTTTTTGACCCATTTCATGACTTAAAGAGACTTTAAGTTATTAT  900

seq1  CTGTTTAGATATGGAAACTATAAACAAATTGTCATTGAATATTACAAAAT  950
      ||||||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  CTGTTTAGATATGGAAACTAT-AACAAATTGTCATTGAATATTAC-AAAT  948

seq1  AATTGGTCTGTTTTTTTTTAAATGCTGTCATTAAATCAGCAAAGGTACAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTCTGTTTTTTTTTAAATGCTGTCATTAAATCAGCAAAGGTACAA  998

seq1  AGGGGCAAAACTGGACCTCCATTTCT-ATAGGAGGACTAATGTATCCTTA  1049
      | ||||||||||||||   ||||||| |||||||||||||||||| ||||
seq2  A-GGGCAAAACTGGAC--TCATTTCTAATAGGAGGACTAATGTAT-CTTA  1044

seq1  GATGAGTGGAGACAATCTTGTTTTGTTTT-ACAGTTTTCAGCTGTCTTAT  1098
      ||||||||   |||||| ||||||||||| ||||  ||||||||||||||
seq2  GATGAGTGAGAACAATC-TGTTTTGTTTTAACAG-GTTCAGCTGTCTTAT  1092

seq1  TTAATAAAGATCAAAAGGAAAAATGGAAAACTCCCCAAACGATGGATACA  1148
      |  ||||||||||||||| ||| ||||||   | || |||||||||||||
seq2  T--ATAAAGATCAAAAGGGAAATTGGAAA---CTCCTAACGATGGATACA  1137

seq1  T-CGTCTATTGTTCATCAGTATGAGTACCATGGTACA  1184
      | |||| |||||||||||| |||||   |||||||||
seq2  TCCGTC-ATTGTTCATCAGAATGAGATACATGGTACA  1173


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