BAC Information

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BAC

Clone NameB6Ng01-044F06
Chromosome15 (Build37)
Map Location 7,998,370 - 8,126,169
singlet/doubletdoublet
Overlap geneWdr70, Nup155, 2410089E03Rik
Upstream geneLifr, Egflam, Gdnf, LOC665556, LOC621001
Downstream geneLOC100039599, Nipbl, EG666437, LOC100039560, LOC100039633, Slc1a3, EG622770, LOC268781, LOC382969, LOC100039619, Ranbp3l, 1110020G09Rik, Skp2, Lmbrd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044F06.bB6Ng01-044F06.g
ACCDH870112DH870113
length1,0731,178
definitionDH870112|Mus musculus domesticus DNA, BAC clone: B6Ng01-044F06, 5' end.DH870113|Mus musculus domesticus DNA, BAC clone: B6Ng01-044F06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,125,085 - 8,126,169)(7,998,370 - 7,999,558)
sequence
gaattcttttcccattttcagctacgtataagtatagtcttgaagagctt
gctaaaaaaacacaaaataaaacagaaaaattaaacttttgaaatttgat
ttttttcctactttttggtttttatgaaatagggtctcaatctgtcggcc
tccaactcactgtgatcctcctacttcagcctcccgaatgcttgcctgca
aggtaggctacccttgtaacaggaactcaagctgtttacattcaggatgt
tatagctaaagcattagtaataaaagtacaaacaagggctggagagatgg
ctcagcggttaagagcactgactggctcttccgaaggtcccaagttcaaa
tcccagcaaccacatggtggctcacaaccatccataatgagatctgatgc
cctcttctggggtgtctgaagacagttacagtgtatttacatgtaataaa
taaataaataaataaatatttttttttaaacgtacaaacaattacattta
ctactttttgtttgagacagaatttctctttgtagccctggttatgctgg
aacttactatgtagaccaggctggcctcgaactcagaaatccacctgccc
ctgcctcccaggtgctggggtttaaaggcgtgcgtcaccatgtcaggcgt
tacactaacgtactaggaactgaccctttgcctcgtgtatgctgggcaag
cgctctaacactgagacccactactaaagctctttcacctgtgatgacag
gtctgtgctcaggctaaccttcagctcaacccgagggacaagcaatactt
ctccttctggtcctcctgcctcaggctccctgaacagtggggattacaga
cttgttcataaaacctgaacataggaacagtaggatgacaactcccagca
atgacaggcctgccaggttttcctcttcaagctgaactaggtgcaaaggt
cagcagcaaatttccgaacctacagtacacagacagaacagacattcata
gcacgcacacatcaatgcacacacgttagcactatggaaaatttctagct
tttcccatcatcaaaatctaaaa
gaattcaaggctaccctgggctacatggtgtttaaaacctaacctgcagg
gctggaaagatggctcctggaagtatttctcaacacttcagaatatgggt
tcagaaatagcacatataagctatcctatgacaatctctcattacttcag
acactaacatcatgggacagtgtaatgttacctagcccctcctgaccact
ctctatccaaactgcaaaatagtgtcttaaagtgtatatatgtatctcgc
atttctggatcctcgggccacaaaacagaaaacacatggcaaacacagaa
tagttgtgggaatgaataaataatttttcatttacagtgaaactttggga
ttgctggttatgaccataaaaagaagcagatgctattccaccaggtcagt
ccaatcagaggcagagaataacaattccccaaaatgaaaaccttgtaaga
aaattattctatcacaactaaatacagatcaagcactgagacagcagaga
agtgcaggcagaaggttcgggctatttcctccgagaggctgctacggtct
attactgcaatagtttaaagaaggcactcagaaaccagaggggagctgaa
taccaataaacaaatagctggggattttcagcttattctaaaacaaagat
actactttaagatgtaatattttctgagaagtattacacataacctattt
cagaggtgaaaacattccaacaaaaactcaaaaacaattaaaaggcccaa
caaatggatttgcggctttctcccaattgaattatataggattttcctgt
atctggcaatgaatttaagcaagaaagcatgtataagtgctaagaaccgg
gagagcatttgaaatgtctcacttagaaaggaatttatcgtaacccacat
ctcatttcataagtaatacttaaaagaagaaactacgatagtctgcctct
catttcataactaattactttttagtcactcagcaaatagaaaaacattg
caaaaaatagctgtatgagaattatttcatttaatcaatgcagaatgtac
ctaaatatagaaaatttcttacacttcagcaaaaacttagggccatatta
ctaggggtggattaaagtattgtttacattaaacaacttttactggaaat
caggtggtataacctctaaccaaagccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_8125085_8126169
seq2: B6Ng01-044F06.b_43_1115 (reverse)

seq1  TTTTAGATTTTTGTTGATGGGGAAAAGCCTATGAAATTTTTTCATAGTGC  50
      ||||||| ||||| |||| |||||||| ||| |||| |||| ||||||||
seq2  TTTTAGA-TTTTGATGAT-GGGAAAAG-CTA-GAAA-TTTTCCATAGTGC  45

seq1  T-ACGTGTGTGTGTGTGTGTGTGTGTGTGCCTATGAATGTCCTGTTTCTG  99
      | |||||||||  |   |||||| |||   |||||||||| ||| |||||
seq2  TAACGTGTGTGCATTGATGTGTGCGTG---CTATGAATGT-CTG-TTCTG  90

seq1  TCTGTGTACTGTGTGTTCGGAAATTTGGCTGCTGGTGCTTTGCACCTAGT  149
      ||||||||||||  |||||||||||| |||||| |  |||||||||||||
seq2  TCTGTGTACTGTAGGTTCGGAAATTT-GCTGCT-GACCTTTGCACCTAGT  138

seq1  TCAGCTTGAAGGAGAAAACCTGGCAGGCCTGTCATTGCTGTGATGTTGTC  199
      |||||||||||  ||||||||||||||||||||||||||| || ||||||
seq2  TCAGCTTGAAGAGGAAAACCTGGCAGGCCTGTCATTGCTGGGA-GTTGTC  187

seq1  ATCCTACTGTTCCTATGTTCAGGTTTTATGGAACAGGTCTGTAATCCCCA  249
      ||||||||||||||||||||||||||||| ||||| ||||||||||||||
seq2  ATCCTACTGTTCCTATGTTCAGGTTTTAT-GAACAAGTCTGTAATCCCCA  236

seq1  CTGTTCA-GGAGCCTGAGGCAGGAGGACCAGAAGGAGAAGTATTGCTTGT  298
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAGGGAGCCTGAGGCAGGAGGACCAGAAGGAGAAGTATTGCTTGT  286

seq1  CCCTCGGGTTGAGCTGAAGGTTAGCCTGAGCACAGACCTGTCATCACAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGGGTTGAGCTGAAGGTTAGCCTGAGCACAGACCTGTCATCACAGG  336

seq1  TGAAAGAGCTTTAGTAGTGGGTCTCAGTGTTAGAGCGCTTGCCCAGCATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAGCTTTAGTAGTGGGTCTCAGTGTTAGAGCGCTTGCCCAGCATA  386

seq1  CACGAGGCAAAGGGTCAGTTCCTAGTACGTTAGTGTAACGCCTGACATGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAGGCAAAGGGTCAGTTCCTAGTACGTTAGTGTAACGCCTGACATGG  436

seq1  TGACGCACGCCTTTAAACCCCAGCACCTGGGAGGCAGGGGCAGGTGGATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGCACGCCTTTAAACCCCAGCACCTGGGAGGCAGGGGCAGGTGGATT  486

seq1  TCTGAGTTCGAGGCCAGCCTGGTCTACATAGTAAGTTCCAGCATAACCAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTCGAGGCCAGCCTGGTCTACATAGTAAGTTCCAGCATAACCAG  536

seq1  GGCTACAAAGAGAAATTCTGTCTCAAACAAAAAGTAGTAAATGTAATTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACAAAGAGAAATTCTGTCTCAAACAAAAAGTAGTAAATGTAATTGT  586

seq1  TTGTACGTTTAAAAAAAAATATTTATTTATTTATTTATTTATTACATGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACGTTTAAAAAAAAATATTTATTTATTTATTTATTTATTACATGTA  636

seq1  AATACACTGTAACTGTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACTGTAACTGTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCA  686

seq1  TTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTGGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTTGGGA  736

seq1  CCTTCGGAAGAGCCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCGGAAGAGCCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGC  786

seq1  CCTTGTTTGTACTTTTATTACTAATGCTTTAGCTATAACATCCTGAATGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTTGTACTTTTATTACTAATGCTTTAGCTATAACATCCTGAATGT  836

seq1  AAACAGCTTGAGTTCCTGTTACAAGGGTAGCCTACCTTGCAGGCAAGCAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCTTGAGTTCCTGTTACAAGGGTAGCCTACCTTGCAGGCAAGCAT  886

seq1  TCGGGAGGCTGAAGTAGGAGGATCACAGTGAGTTGGAGGCCGACAGATTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGAGGCTGAAGTAGGAGGATCACAGTGAGTTGGAGGCCGACAGATTG  936

seq1  AGACCCTATTTCATAAAAACCAAAAAGTAGGAAAAAAATCAAATTTCAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTATTTCATAAAAACCAAAAAGTAGGAAAAAAATCAAATTTCAAA  986

seq1  AGTTTAATTTTTCTGTTTTATTTTGTGTTTTTTTAGCAAGCTCTTCAAGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAATTTTTCTGTTTTATTTTGTGTTTTTTTAGCAAGCTCTTCAAGA  1036

seq1  CTATACTTATACGTAGCTGAAAATGGGAAAAGAATTC  1085
      |||||||||||||||||||||||||||||||||||||
seq2  CTATACTTATACGTAGCTGAAAATGGGAAAAGAATTC  1073

seq1: chr15_7998370_7999558
seq2: B6Ng01-044F06.g_67_1244

seq1  GAATTCAAGGCTACCCTGGGCTACATGGTGTTTAAAACCTAACCTGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCTACCCTGGGCTACATGGTGTTTAAAACCTAACCTGCAGG  50

seq1  GCTGGAAAGATGGCTCCTGGAAGTATTTCTCAACACTTCAGAATATGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAAGATGGCTCCTGGAAGTATTTCTCAACACTTCAGAATATGGGT  100

seq1  TCAGAAATAGCACATATAAGCTATCCTATGACAATCTCTCATTACTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATAGCACATATAAGCTATCCTATGACAATCTCTCATTACTTCAG  150

seq1  ACACTAACATCATGGGACAGTGTAATGTTACCTAGCCCCTCCTGACCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAACATCATGGGACAGTGTAATGTTACCTAGCCCCTCCTGACCACT  200

seq1  CTCTATCCAAACTGCAAAATAGTGTCTTAAAGTGTATATATGTATCTCGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCCAAACTGCAAAATAGTGTCTTAAAGTGTATATATGTATCTCGC  250

seq1  ATTTCTGGATCCTCGGGCCACAAAACAGAAAACACATGGCAAACACAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGATCCTCGGGCCACAAAACAGAAAACACATGGCAAACACAGAA  300

seq1  TAGTTGTGGGAATGAATAAATAATTTTTCATTTACAGTGAAACTTTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGTGGGAATGAATAAATAATTTTTCATTTACAGTGAAACTTTGGGA  350

seq1  TTGCTGGTTATGACCATAAAAAGAAGCAGATGCTATTCCACCAGGTCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGTTATGACCATAAAAAGAAGCAGATGCTATTCCACCAGGTCAGT  400

seq1  CCAATCAGAGGCAGAGAATAACAATTCCCCAAAATGAAAACCTTGTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCAGAGGCAGAGAATAACAATTCCCCAAAATGAAAACCTTGTAAGA  450

seq1  AAATTATTCTATCACAACTAAATACAGATCAAGCACTGAGACAGCAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTCTATCACAACTAAATACAGATCAAGCACTGAGACAGCAGAGA  500

seq1  AGTGCAGGCAGAAGGTTCGGGCTATTTCCTCCGAGAGGCTGCTACGGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGGCAGAAGGTTCGGGCTATTTCCTCCGAGAGGCTGCTACGGTCT  550

seq1  ATTACTGCAATAGTTTAAAGAAGGCACTCAGAAACCAGAGGGGAGCTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGCAATAGTTTAAAGAAGGCACTCAGAAACCAGAGGGGAGCTGAA  600

seq1  TACCAATAAACAAATAGCTGGGGATTTTCAGCTTATTCTAAAACAAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATAAACAAATAGCTGGGGATTTTCAGCTTATTCTAAAACAAAGAT  650

seq1  ACTACTTTAAGATGTAATATTTTCTGAGAAGTATTACACATAACCTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTAAGATGTAATATTTTCTGAGAAGTATTACACATAACCTATTT  700

seq1  CAGAGGTGAAAACATTCCAACAAAAACTCAAAAACAATTAAAAGGCCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTGAAAACATTCCAACAAAAACTCAAAAACAATTAAAAGGCCCAA  750

seq1  CAAATGGATTTGCGGCTTTCTCCCAATTGAATTATATAGGATTTTCCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGATTTGCGGCTTTCTCCCAATTGAATTATATAGGATTTTCCTGT  800

seq1  ATCTGGCAATGAATTTAAGCAAGAAAGCATGTATAAGTGCTAAGAACCGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGCAATGAATTTAAGCAAGAAAGCATGTATAAGTGCTAAGAACCGG  850

seq1  GAGAGCATTTGAAATGTCTCACTTAGAAAGGAATTTATCGTAACCCACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCATTTGAAATGTCTCACTTAGAAAGGAATTTATCGTAACCCACAT  900

seq1  CTCATTTCATAAGTAATACTTAAAAGAAGAAACTACGATAGTCTGCCTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTCATAAGTAATACTTAAAAGAAGAAACTACGATAGTCTGCCTCT  950

seq1  CATTTCATAACTAATTACTTTTTAGTCACTCAGCAAATAGAAATACCATT  1000
      ||||||||||||||||||||||||||||||||||||||||||| | ||||
seq2  CATTTCATAACTAATTACTTTTTAGTCACTCAGCAAATAGAAA-AACATT  999

seq1  GCAAAAAAATAGCTGTATGAGAATTATTTCATTTAATTCAATGCAGAATG  1050
      || ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GC-AAAAAATAGCTGTATGAGAATTATTTCATTTAA-TCAATGCAGAATG  1047

seq1  TACCTAAATATAGACAATTTCTAACACTTCAGCAAAAAACTTA-GGCCAT  1099
      |||||||||||||| ||||||| |||||||||| ||||||||| ||||||
seq2  TACCTAAATATAGAAAATTTCTTACACTTCAGC-AAAAACTTAGGGCCAT  1096

seq1  ATTTACATTAGGAGTGAATTAAAAGTATTGTTTACATTTAAAACCAACAT  1149
      |||   | |||| ||| ||| |||||||||||||||||   || |||| |
seq2  ATT---ACTAGGGGTGGATT-AAAGTATTGTTTACATT---AAACAAC-T  1138

seq1  TTTACTGGAAATCAAGTGGGGTATAA-CTC-AAACAAAGCCC  1189
      |||||||||||||| ||  ||||||| ||| || ||||||||
seq2  TTTACTGGAAATCAGGT--GGTATAACCTCTAACCAAAGCCC  1178