BAC Information

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BAC

Clone NameB6Ng01-045G01
Chromosome15 (Build37)
Map Location 53,022,674 - 53,138,161
singlet/doubletdoublet
Overlap geneExt1
Upstream geneLOC665219, Slc30a8, LOC100039748, Thrap6, LOC100039745
Downstream geneSamd12, EG665097, EG621631, Tnfrsf11b, LOC665280
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045G01.bB6Ng01-045G01.g
ACCDH870850DH870851
length9761,065
definitionDH870850|Mus musculus domesticus DNA, BAC clone: B6Ng01-045G01, 5' end.DH870851|Mus musculus domesticus DNA, BAC clone: B6Ng01-045G01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,137,184 - 53,138,161)(53,022,674 - 53,023,761)
sequence
gaattctttctctgtgaatcagtttcagtttctcatagtgatttctctaa
attcttggttaaggcccaattaatttcaccttctgatgtatctaaaagta
gtcttgctttaatttatgctagcatgttcctttttgcaaactttattttt
attttatttcatttgaatgtatattttgctttacgtgtgtgtttgtgtag
acacaagcaggcagtgtctgaggaaaccaggagacagtgtctgctgccct
agaactggatgtgcaagttggtcctttggtgatagagaagctaatgttct
taattgctgagctgtatcttcagcccttaaaatactcttagaccaaagat
tagttttattttgaggatattgaaacataattgtactggaaagaatttct
cttattttcatagatacctttaaaaatagacatatccttctctctgtttg
tgtgtgtgtctatcctgtacacacacacatgtacacacacacatgtgtac
acacacatgtgtatacacacacgcgcgcgcgcgcacacacacacacacac
acacacacacagagaccactgaagttcagccacaaatctaaggtttcttc
tgtaagcactttaaacttggacataattagttacatctgccattgacttc
cctttacacatgaacacacttttgcctagaagcctcattttcatgggtaa
agggggtttgtgaatctaccctgcaggagtattgttgtaaattttctgta
tttgttctggggttatagctactctttacaaaatgatattggtattagtg
cattgttcttagaggcaggctttcggcctgtctcttcctgggatcaccct
gttgtatttggcatgctgagaacagtaagtagagacggatccttatacga
tgcttcagctaacttctgtggtggactcactcctgaggtgaaattggctg
ctcagaccttttttatttttctttct
gaattcaattctaagctggtacacactttccttctggtatacatcacatt
actcctttgatgagtataagttaggtatatatcagtcaagtccattttct
tcccttgattataaattccttaaatacaaagaaagccaaatcttattcat
gttgccccaaccagaagaaacaaaattgcatttagtacataaatacataa
ataactatttctatttgactagtgggttgtaactacaacattcagtccac
actaggaagcgctcatccttttcaggcccagaaatgattcttgagtctac
tgaccatgttcaagctttcctcaaaacaatttttataatcgtgataaatc
aaggcattcgctgatatagccggaactttccagatcctgagaggagccag
actattatggagaaaatgatgtttgctcattttccctaaggtgcagacca
tagaggtggcacaacagggcatctatctgccgagactcactggggagcta
cagtagggtagccccattctacagagtgggtggatgtaagttatagacag
agagcatctagggagtccattgtaaaaaaaattctgtcgaggaaagagaa
gcaggctgagcaggatgctagaacagataccccagaaagaaaaggcttgg
gctggggttttttaaaaaaaaaaaaaaaaacctagaaggatgttgtagct
catttcaagtcaaagaacctttcctaaacagctacaccggaacagccctg
gggtctggggagtagctgtttaaaggtgaattaaaacttgctatgccttc
agaaactcattagtatagcagggaatcagacattaagccaatctgtggtg
atggaaagtaggtcttgatcatcctataatgagacaccaagaagtagaga
tgatagcatcactaatcaaaagagctttctgtctgggataaagtctccag
ggagggctgttgggcctaaaggctcagcgggagttatcatggcatatgaa
agttatccttgccagatcccttgctggcaatgcaataaaccaagctgctg
taccaacgtgcgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_53137184_53138161
seq2: B6Ng01-045G01.b_44_1019 (reverse)

seq1  AGAAAGAAAAAAAAAAAAAGTCTGAGCAGCCAATTTCACCTCCAGAGTGA  50
      ||||||||||| |||||| |||||||||||||||||||||||  ||||| 
seq2  AGAAAGAAAAATAAAAAAGGTCTGAGCAGCCAATTTCACCTCAGGAGTG-  49

seq1  AGTCCACACCAG-AGCTAGCTGAAGCATCGTTTAAGGATCCGTTCTCTAC  99
      |||||||  ||| || ||||||||||||||| |||||||||| |||||||
seq2  AGTCCACCACAGAAGTTAGCTGAAGCATCGTATAAGGATCCG-TCTCTAC  98

seq1  TTACTGTTCTACAGCATGCCAAATACAACAGGGTGATCCCAGGAAGAGAC  149
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTCT-CAGCATGCCAAATACAACAGGGTGATCCCAGGAAGAGAC  147

seq1  AGGCCGAAAGCCTGCCTCTAAGAACAATGCACTAATACCAATATCATTTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCGAAAGCCTGCCTCTAAGAACAATGCACTAATACCAATATCATTTT  197

seq1  GTAAAGAGTAGCTATAACCCCAGAACAAATACAGAAAATTTACAACAATA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAGTAGCTATAACCCCAGAACAAATACAGAAAATTTACAACAATA  247

seq1  CTCCTGCAGGGTAGATTCACAAACCCCCTTTACCCATGAAAATGAGGCTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCAGGGTAGATTCACAAACCCCCTTTACCCATGAAAATGAGGCTT  297

seq1  CTAGGCAAAAGTGTGTTCATGTGTAAAGGGAAGTCAATGGCAGATGTAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAAAAGTGTGTTCATGTGTAAAGGGAAGTCAATGGCAGATGTAAC  347

seq1  TAATTATGTCCAAGTTTAAAGTGCTTACAGAAGAAACCTTAGATTTGTGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGTCCAAGTTTAAAGTGCTTACAGAAGAAACCTTAGATTTGTGG  397

seq1  CTGAACTTCAGTGGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTTCAGTGGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCG  447

seq1  CGCGCGCGTGTGTGTATACACATGTGTGTGTACACATGTGTGTGTGTACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGCGCGTGTGTGTATACACATGTGTGTGTACACATGTGTGTGTGTACA  497

seq1  TGTGTGTGTGTACAGGATAGACACACACACAAACAGAGAGAAGGATATGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTACAGGATAGACACACACACAAACAGAGAGAAGGATATGT  547

seq1  CTATTTTTAAAGGTATCTATGAAAATAAGAGAAATTCTTTCCAGTACAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTAAAGGTATCTATGAAAATAAGAGAAATTCTTTCCAGTACAAT  597

seq1  TATGTTTCAATATCCTCAAAATAAAACTAATCTTTGGTCTAAGAGTATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTCAATATCCTCAAAATAAAACTAATCTTTGGTCTAAGAGTATTT  647

seq1  TAAGGGCTGAAGATACAGCTCAGCAATTAAGAACATTAGCTTCTCTATCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGCTGAAGATACAGCTCAGCAATTAAGAACATTAGCTTCTCTATCA  697

seq1  CCAAAGGACCAACTTGCACATCCAGTTCTAGGGCAGCAGACACTGTCTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGACCAACTTGCACATCCAGTTCTAGGGCAGCAGACACTGTCTCC  747

seq1  TGGTTTCCTCAGACACTGCCTGCTTGTGTCTACACAAACACACACGTAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCCTCAGACACTGCCTGCTTGTGTCTACACAAACACACACGTAAA  797

seq1  GCAAAATATACATTCAAATGAAATAAAATAAAAATAAAGTTTGCAAAAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATATACATTCAAATGAAATAAAATAAAAATAAAGTTTGCAAAAAG  847

seq1  GAACATGCTAGCATAAATTAAAGCAAGACTACTTTTAGATACATCAGAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGCTAGCATAAATTAAAGCAAGACTACTTTTAGATACATCAGAAG  897

seq1  GTGAAATTAATTGGGCCTTAACCAAGAATTTAGAGAAATCACTATGAGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATTAATTGGGCCTTAACCAAGAATTTAGAGAAATCACTATGAGAA  947

seq1  ACTGAAACTGATTCACAGAGAAAGAATTC  978
      |||||||||||||||||||||||||||||
seq2  ACTGAAACTGATTCACAGAGAAAGAATTC  976

seq1: chr15_53022674_53023761
seq2: B6Ng01-045G01.g_68_1132

seq1  GAATTCAATTCTAAGCTGGTACACACTTTCCTTCTGGTATACATCACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCTAAGCTGGTACACACTTTCCTTCTGGTATACATCACATT  50

seq1  ACTCCTTTGATGAGTATAAGTTAGGTATATATCAGTCAAGTCCATTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTTGATGAGTATAAGTTAGGTATATATCAGTCAAGTCCATTTTCT  100

seq1  TCCCTTGATTATAAATTCCTTAAATACAAAGAAAGCCAAATCTTATTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGATTATAAATTCCTTAAATACAAAGAAAGCCAAATCTTATTCAT  150

seq1  GTTGCCCCAACCAGAAGAAACAAAATTGCATTTAGTACATAAATACATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCCCAACCAGAAGAAACAAAATTGCATTTAGTACATAAATACATAA  200

seq1  ATAACTATTTCTATTTGACTAGTGGGTTGTAACTACAACATTCAGTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTATTTCTATTTGACTAGTGGGTTGTAACTACAACATTCAGTCCAC  250

seq1  ACTAGGAAGCGCTCATCCTTTTCAGGCCCAGAAATGATTCTTGAGTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGAAGCGCTCATCCTTTTCAGGCCCAGAAATGATTCTTGAGTCTAC  300

seq1  TGACCATGTTCAAGCTTTCCTCAAAACAATTTTTATAATCGTGATAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATGTTCAAGCTTTCCTCAAAACAATTTTTATAATCGTGATAAATC  350

seq1  AAGGCATTCGCTGATATAGCCGGAACTTTCCAGATCCTGAGAGGAGCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTCGCTGATATAGCCGGAACTTTCCAGATCCTGAGAGGAGCCAG  400

seq1  ACTATTATGGAGAAAATGATGTTTGCTCATTTTCCCTAAGGTGCAGACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTATGGAGAAAATGATGTTTGCTCATTTTCCCTAAGGTGCAGACCA  450

seq1  TAGAGGTGGCACAACAGGGCATCTATCTGCCGAGACTCACTGGGGAGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTGGCACAACAGGGCATCTATCTGCCGAGACTCACTGGGGAGCTA  500

seq1  CAGTAGGGTAGCCCCATTCTACAGAGTGGGTGGATGTAAGTTATAGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGGGTAGCCCCATTCTACAGAGTGGGTGGATGTAAGTTATAGACAG  550

seq1  AGAGCATCTAGGGAGTCCATTGTAAAAAAAATTCTGTCGAGGAAAGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATCTAGGGAGTCCATTGTAAAAAAAATTCTGTCGAGGAAAGAGAA  600

seq1  GCAGGCTGAGCAGGATGCTAGAACAGATACCCCAGAAAGAAAAGGCTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTGAGCAGGATGCTAGAACAGATACCCCAGAAAGAAAAGGCTTGG  650

seq1  GCAGTAATCTCTAAGAGCAAAGCATTAGGAGCCTAGAAGGATGTTGTAGC  700
      || |   | | | | |  |||  |  |  | |||||||||||||||||||
seq2  GCTGGGGTTTTTTA-AAAAAAAAAAAAAAAACCTAGAAGGATGTTGTAGC  699

seq1  TCATTTCAAGTCAAAGAACCTTTCCTAAACAGCTACACCGGAACAGCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCAAGTCAAAGAACCTTTCCTAAACAGCTACACCGGAACAGCCCT  749

seq1  GGGGTCTGGGGAGTAGCTGTTTAAAGGTGAATTAAAACTTGCTATGCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTGGGGAGTAGCTGTTTAAAGGTGAATTAAAACTTGCTATGCCTT  799

seq1  CAAGAAACTCATTAGTATAGCAGGGAATCAGACATTAAGCCAATCTGTGG  850
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-AGAAACTCATTAGTATAGCAGGGAATCAGACATTAAGCCAATCTGTGG  848

seq1  TGATGGAAAGTAGGTCTTGATCAACCCTATAATGAGACACCAAGAAGTAG  900
      |||||||||||||||||||||| | |||||||||||||||||||||||||
seq2  TGATGGAAAGTAGGTCTTGATC-ATCCTATAATGAGACACCAAGAAGTAG  897

seq1  AGATTGATAGCATCACTAATTCAAAAAGAAGCTTTCTTGTCTGGGGATAA  950
      ||| ||||||||||||||| ||||||   ||||||| ||||| |||||||
seq2  AGA-TGATAGCATCACTAA-TCAAAA--GAGCTTTC-TGTCT-GGGATAA  941

seq1  AGTCTCCAGGGTAGGGCCTGTTTGGGCCTTAAAGGCTCAGTGGGAGTTTA  1000
      ||||||||||| |||| ||| ||||||| ||||||||||| |||||||  
seq2  AGTCTCCAGGG-AGGG-CTG-TTGGGCC-TAAAGGCTCAGCGGGAGTT--  985

seq1  ATCAGTGGGCATAATGAAAGTATACACTGCCCAGATCCCTTTTGCTGGGC  1050
      ||||   ||||| |||||||| ||  ||  |||||||||  ||||| |||
seq2  ATCA--TGGCAT-ATGAAAGT-TATCCTTGCCAGATCCC--TTGCT-GGC  1028

seq1  AATGCAATAGACCCAAGCTGCTGTGACTGAC-TGCGGGT  1088
      ||||||||| | |||||||||||| ||  || |||||||
seq2  AATGCAATA-AACCAAGCTGCTGT-ACCAACGTGCGGGT  1065