BAC Information

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BAC

Clone NameB6Ng01-046E10
Chromosome15 (Build37)
Map Location 73,127,972 - 73,129,009
singlet/doubletsinglet
Overlap genePtk2
Upstream geneKcnk9, 1810044A24Rik, LOC665621, Peg13, LOC100041120, Chrac1, Eif2c2
Downstream geneLOC666053, LOC100040929, Dennd3, Slc45a4, Gpr20, LOC100040946, pPtp4a3, Gm628, LOC100041273, EG625276, LOC100040966, EG666113, LOC100041307
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046E10.bB6Ng01-046E10.g
ACCDH871490DH871491
length635197
definitionDH871490|Mus musculus domesticus DNA, BAC clone: B6Ng01-046E10, 5' end.DH871491|Mus musculus domesticus DNA, BAC clone: B6Ng01-046E10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatcaggcttcttgaattagacaggtagtttatggcagtagttc
attctcctgtcttccttcattcctatctatggaagctgagttttctctta
ccctcttatttatctggttctcctaaagatgtcatcacagttgagcatgc
ctaaacctggaaggaagcccataaggctactgcatgatatccatcagaga
aaaatgtccctgactcttaaggctcttgagaataggctggtagttggggt
cagaaagaataacatcaatgctagcagatcccaggcactgaagacttctc
catggcctaagagctatatctttctttcctaaagcccacacacctagcag
actttaaccaagtgcagaccatccagtactcaaacagtgaagacaaagac
aggaaaggaatgctacaactcaaaatcgctggtgctcctgaggtaaggca
ctcttgctcttaaagaatttgatcaagaaaaaaggttgggtgagtagaga
ggtggataggatgtgggagaggttggaatgggggaaaaacatgattgaaa
tatattgattgaaaaatttaaatttttaaaaaattttttacgttaaaatc
tgatccttttgataatgtagaaatgactctctggg
ctgagtgtgcaaatgagtgggtctgattcttgtgccttctcttgggctgc
tggtttatcttctacaactcagatgtgatagtttttcgttttattttata
ttttattttgttatatcaaaggaagaagaagaaaaagaggaggaggggga
caaagagtaggcagggggagaaagaggaagaagaggaggggggagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_73127972_73129009
seq2: B6Ng01-046E10.b_44_678 (reverse)

seq1  CCCAGAGTCTTGTGTAGATCAACAGTTCTTTCTTCTACCACTTATTACTT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TCTTTCCTTTTTCTTTATTGGTGTTTAGAGATGAGATCTTGCTCTGTGGC  100
                                                        
seq2  --------------------------------------------------  0

seq1  CCATGCTGAGAGCTGACCTGGAATCCAGAAGGCTGGGATTATAGCAGTGG  150
                                                        
seq2  --------------------------------------------------  0

seq1  CTACTGTGCCCTGCCTTCCTATTTTTATCACTCTGTTGCAGGTACTATTA  200
                                                        
seq2  --------------------------------------------------  0

seq1  TCATAGTGACTGCCCAGGGACTCTTCCAACACAATTCTAACTGGCTTCCT  250
                                                        
seq2  --------------------------------------------------  0

seq1  TGATGCTTCAGAGTGGTCTCTGATTATACTTACAGCAATAGTTAGGTTTT  300
                                                        
seq2  --------------------------------------------------  0

seq1  TCAAATCTAGTCCTCTCCTATTCTGAAGACATTTAACCACTAATATTAAT  350
                                                        
seq2  --------------------------------------------------  0

seq1  CTTTATATATTAGGAAATTGTGAGATTAATTACCGATGAACACTTCATCT  400
                                                        
seq2  --------------------------------------------------  0

seq1  TTATCCCAGAGAAGTCATTTCTACATTATC-AAAGGATCAGATTTTAACG  449
          ||||||| |||||||||||||||||| |||||||||||||||||||
seq2  ----CCCAGAG-AGTCATTTCTACATTATCAAAAGGATCAGATTTTAACG  45

seq1  TAAAAAATTTTTT-AAAATTTTAATTTTTCAATCAATATATTTCAATCAT  498
      ||||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  TAAAAAATTTTTTAAAAATTTAAATTTTTCAATCAATATATTTCAATCAT  95

seq1  GTTTTTCCCCCATTCCAACCTCTCCCACATCCTATCCACCTCTCTACTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCCCCCATTCCAACCTCTCCCACATCCTATCCACCTCTCTACTCA  145

seq1  CCCAACCTTTTTTCTTGATCAAATTCTTTAAGAGCAAGAGTGCCTTACCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACCTTTTTTCTTGATCAAATTCTTTAAGAGCAAGAGTGCCTTACCT  195

seq1  CAGGAGCACCAGCGATTTTGAGTTGTAGCATTCCTTTCCTGTCTTTGTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCACCAGCGATTTTGAGTTGTAGCATTCCTTTCCTGTCTTTGTCT  245

seq1  TCACTGTTTGAGTACTGGATGGTCTGCACTTGGTTAAAGTCTGCTAGGTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTTTGAGTACTGGATGGTCTGCACTTGGTTAAAGTCTGCTAGGTG  295

seq1  TGTGGGCTTTAGGAAAGAAAGATATAGCTCTTAGGCCATGGAGAAGTCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCTTTAGGAAAGAAAGATATAGCTCTTAGGCCATGGAGAAGTCTT  345

seq1  CAGTGCCTGGGATCTGCTAGCATTGATGTTATTCTTTCTGACCCCAACTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCTGGGATCTGCTAGCATTGATGTTATTCTTTCTGACCCCAACTA  395

seq1  CCAGCCTATTCTCAAGAGCCTTAAGAGTCAGGGACATTTTTCTCTGATGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTATTCTCAAGAGCCTTAAGAGTCAGGGACATTTTTCTCTGATGG  445

seq1  ATATCATGCAGTAGCCTTATGGGCTTCCTTCCAGGTTTAGGCATGCTCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATGCAGTAGCCTTATGGGCTTCCTTCCAGGTTTAGGCATGCTCAA  495

seq1  CTGTGATGACATCTTTAGGAGAACCAGATAAATAAGAGGGTAAGAGAAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATGACATCTTTAGGAGAACCAGATAAATAAGAGGGTAAGAGAAAA  545

seq1  CTCAGCTTCCATAGATAGGAATGAAGGAAGACAGGAGAATGAACTACTGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTTCCATAGATAGGAATGAAGGAAGACAGGAGAATGAACTACTGC  595

seq1  CATAAACTACCTGTCTAATTCAAGAAGCCTGATTGAATTC  1038
      ||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACTACCTGTCTAATTCAAGAAGCCTGATTGAATTC  635