BAC Information

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BAC

Clone NameB6Ng01-047L15
Chromosome15 (Build37)
Map Location 28,402,722 - 28,403,774
singlet/doubletsinglet
Overlap genenone
Upstream geneAnk, BC087945, LOC100040622, BC052328, Trio, LOC667126, Dnahc5
Downstream geneEG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047L15.bB6Ng01-047L15.g
ACCDH872509DH872510
length1,2001,040
definitionDH872509|Mus musculus domesticus DNA, BAC clone: B6Ng01-047L15, 5' end.DH872510|Mus musculus domesticus DNA, BAC clone: B6Ng01-047L15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcctgacacattataattagaaaaacaaatacactaaataaag
atagaatattaaaagcagtaagggaaaaaggtcaagtaacatataaaggc
aggccaatcagaattacaccagacttttcaccagagactatgaaagccag
aagatcctggacagatgttatacagacactaagagaccacaaatgccagc
ccaggctactatacccagccaaactttcaattgccatagatggagaaatg
aaagtattccaccacaaaaacaaattcacaaattatctttccacgaatcc
agcacttcaaagaataataatagaaaaaaaaatacaaggacggaaaccat
gccctagaaaaagcaagaaaataacccttcaacaaaccgaaaagaagaca
accacaagaacagaatgccaactctaacaacaaaaataataggaagcaac
aattacttttccttaatatctcttaatataaatggactcaattccccaat
aaaaagacatagactaacagactggctacacaaacaggacccaacatttt
tctgcttacaggaaacccatcccagcaaaaaagacaggcactaactcaga
atgaaaggctggaaaacaattttccaagcaaatggtctgaagaaacaaga
aggagtacccattctaatatcgaataaattcgacttccaacctaaggtta
tcaaaaaagacaagcagggacacttaatactcatcaaaggtaaaatcctc
caagagcaactctcaattctgattatctatgctccaaatgcaagggcagc
cacattcattaaagaaactttagtaaagctcaaaggtacacattgcaaat
cacgcaataatagtggagacttcaacacaccactttcatcaatggacaga
tcttgaaaacagaaactaaacaggagacagttaaactaacagaagtatga
gcagtgatttacagatatctacaaacaattatctaaaacaaagatatact
tcttctcagcactcatgtacttctcacaaaacagcccacagaacaaaaaa
tgaattgtccatgcatctgtccgatcacatgactagctgatctcattaca
cttaataatgagcacattcatgtgactgacaccctttccatgtactgtcg
aatgtaagagattagactttcagtagaatgagtcacattgcacttatgta

gaattctctactcccaaagagccacaacgaataaaagtctatgtggatgt
agttcaaggaggggatctgttcccatcccacgtgaaagctggtgtcatgt
gagaaagaaacacaggcaatgggagaaactccattatgtaagctgactcc
atcttgagcctgcctgttcccagtttgaactttggttaagagaaatacca
cgaacaattccaggaagaaactgtcctgggcccgggccaatcagggaata
gagagaaagtgcctaaggtcccaggggttatagatttgctcaagctgttt
gaagttatcactgatttatccctgtgcgccaagatacctctgaccaaata
aggcaactgccagactggagactcccattccctgctcaaactagtataaa
aatccctgcctaactgaggcccagggttctcagcacaaatccactgagtt
gttggaggagtctgggggtctgagcttaagcactgaataaagactctttg
cttttgcatatggattctgactcctggtggtttatagggaccctgtaatc
tgggcacaacacgtgaaggacaccggagtaaggtgttgtggactgtaaac
cccacataaactcttcggcaagttgtcctggtcatagtgctttatcacag
caataaaaatgtaactaagactgactgaatgatagggttgaggaggtaac
atctgaagtttgatctcaaggaaaagtggaagcagctcaaacccacaagt
gctgggattgccctcttgctgcccatgctggttgctctttgttgacctga
cacaagctaaacttatttctgtagatgaaaccttcattaagaaaatgcct
ctccatctgattggcctgcggacactcctatagaagcactttcttcagta
atgattaatgtgttagagctagaccattgtgggcagtccatgtctgtgtg
ctgcgtctgggctatatatgaacagagcagctgtgaaagcagcagtagca
tgggctctgtcagtaatgcctcccggttctagctgagctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28402722_28403774
seq2: B6Ng01-047L15.g_65_1104

seq1  GAATTCTCTACTCCCAAAGAGCCACAACGAATAAAAGTCTATGTGGATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACTCCCAAAGAGCCACAACGAATAAAAGTCTATGTGGATGT  50

seq1  AGTTCAAGGAGGGGATCTGTTCCCATCCCACGTGAAAGCTGGTGTCATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAGGAGGGGATCTGTTCCCATCCCACGTGAAAGCTGGTGTCATGT  100

seq1  GAGAAAGAAACACAGGCAATGGGAGAAACTCCATTATGTAAGCTGACTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAAACACAGGCAATGGGAGAAACTCCATTATGTAAGCTGACTCC  150

seq1  ATCTTGAGCCTGCCTGTTCCCAGTTTGAACTTTGGTTAAGAGAAATACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAGCCTGCCTGTTCCCAGTTTGAACTTTGGTTAAGAGAAATACCA  200

seq1  CGAACAATTCCAGGAAGAAACTGTCCTGGGCCCGGGCCAATCAGGGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACAATTCCAGGAAGAAACTGTCCTGGGCCCGGGCCAATCAGGGAATA  250

seq1  GAGAGAAAGTGCCTAAGGTCCCAGGGGTTATAGATTTGCTCAAGCTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAGTGCCTAAGGTCCCAGGGGTTATAGATTTGCTCAAGCTGTTT  300

seq1  GAAGTTATCACTGATTTATCCCTGTGCGCCAAGATACCTCTGACCAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTATCACTGATTTATCCCTGTGCGCCAAGATACCTCTGACCAAATA  350

seq1  AGGCAACTGCCAGACTGGAGACTCCCATTCCCTGCTCAAACTAGTATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTGCCAGACTGGAGACTCCCATTCCCTGCTCAAACTAGTATAAA  400

seq1  AATCCCTGCCTAACTGAGGCCCAGGGTTCTCAGCACAAATCCACTGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTGCCTAACTGAGGCCCAGGGTTCTCAGCACAAATCCACTGAGTT  450

seq1  GTTGGAGGAGTCTGGGGGTCTGAGCTTAAGCACTGAATAAAGACTCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGGAGTCTGGGGGTCTGAGCTTAAGCACTGAATAAAGACTCTTTG  500

seq1  CTTTTGCATATGGATTCTGACTCCTGGTGGTTTATAGGGACCCTGTAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCATATGGATTCTGACTCCTGGTGGTTTATAGGGACCCTGTAATC  550

seq1  TGGGCACAACACGTGAAGGACACCGGAGTAAGGTGTTGTGGACTGTAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACAACACGTGAAGGACACCGGAGTAAGGTGTTGTGGACTGTAAAC  600

seq1  CCCACATAAACTCTTCGGCAAGTTGTCCTGGTCATAGTGCTTTATCACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATAAACTCTTCGGCAAGTTGTCCTGGTCATAGTGCTTTATCACAG  650

seq1  CAATAAAAATGTAACTAAGACTGACTGAATGATAGGGTTGAGGAGGTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAAATGTAACTAAGACTGACTGAATGATAGGGTTGAGGAGGTAAC  700

seq1  ATCTGAAGTTTGATCTCAAGGAAAAGTGGAAGCAGCTCAAACCCACAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAGTTTGATCTCAAGGAAAAGTGGAAGCAGCTCAAACCCACAAGT  750

seq1  GCTGGGATTGCCCTCTTGCTGCCCATGCTGGTTGCTCTTTGTTGACCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATTGCCCTCTTGCTGCCCATGCTGGTTGCTCTTTGTTGACCTGA  800

seq1  CACAAGCTAAACTTATTTCTGTAGATGAAACCTTCATTAAGAAAATGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCTAAACTTATTTCTGTAGATGAAACCTTCATTAAGAAAATGCCT  850

seq1  CTCCATCTGATTGGCCTGCGGACACTCCTATAGAAGCACTTTCTTCAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCTGATTGGCCTGCGGACACTCCTATAGAAGCACTTTCTTCAGTA  900

seq1  ATGATTAATGTGTTAGAGCCTAGACCATTGTGGGCAGTTCCATGTCTGTG  950
      |||||||||||||||||| |||||||||||||||||| ||||||||||||
seq2  ATGATTAATGTGTTAGAG-CTAGACCATTGTGGGCAG-TCCATGTCTGTG  948

seq1  TTGCTGCGTCTGGGCTATATATGAAACAGAGCCAGCTGTGAAAAGCAAGC  1000
       |||||||||||||||||||||| ||||||| |||||||| ||||||   
seq2  -TGCTGCGTCTGGGCTATATATG-AACAGAG-CAGCTGTG-AAAGCA--G  992

seq1  CAGTAAGCATGGGCTCTGTTCAGTTATTGCCTCCCCGTTTCTAGCCTGAG  1050
      |||| ||||||||||||| |||| || ||||| |||| |||||| |||||
seq2  CAGT-AGCATGGGCTCTG-TCAG-TAATGCCT-CCCGGTTCTAG-CTGAG  1037

seq1  CTC  1053
      |||
seq2  CTC  1040