BAC Information

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BAC

Clone NameB6Ng01-048P02
Chromosome15 (Build37)
Map Location 94,112,618 - 94,281,485
singlet/doubletdoublet
Overlap geneAdamts20
Upstream geneYaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631, D630010B17Rik
Downstream genePus7l, Irak4, Twf1, Tmem117, LOC100043315, Nell2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048P02.bB6Ng01-048P02.g
ACCDH873351DH873352
length1,156951
definitionDH873351|Mus musculus domesticus DNA, BAC clone: B6Ng01-048P02, 5' end.DH873352|Mus musculus domesticus DNA, BAC clone: B6Ng01-048P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,112,618 - 94,113,825)(94,280,525 - 94,281,485)
sequence
gaattctcactgggaaattcaaggactagctgtacaaaaaaaaaaaaatc
gagatacaactccctcttttgttactagaattaattgtatttctatgaaa
tagataaggtcttaaacttatcccttctgtattatcccacactcaccctc
tttgtgattacaggcaaacacatggctaaggtcctaatgtgtccactgcc
ttctcaatctcctgtccaatacgtgattccaaagctcaatgtctatgggc
cctaaaagtgcacagacaggataaagtgtctcatacctaaggccgtatat
ttctgaaaagttgtcttcacttttgaccagtggtaaatattctctagggt
tctccagctgcatgcctgagcaatggatctgagggggaatacacaaatat
ctagaaaacaatttccaatgacaagatcaaggtgaaaatcaattagaaac
ggtcgtcatagtaccttcaatattcttcccctgacgttaaggtcatagtc
accatccttggtaacattgtttgtaacttggagttccttgcaggtggtta
gtaatttaccttcaaagataaattaatgcggcaagtcaggagcgagcaag
ttccacacagcacgaactcgaccatcagaaccatcactgtactccgaagg
tctgacagtttgtgttgcagggtgtgacaactgcatagatctatgctgac
attttaactggaacttaggaacaccggatgctgggaagagtttggagtct
attacttacagtcattggcataacatttcttttgggcatctggctttaaa
cgctttaaacataagtcactgggccaaccgttctcagtcctgcatgctac
tctctctccattatcccaattccacaagttactgagcactgtcaacacag
taaagtttgagtaaaatagatacaaatatgagcagaccccacactgcctt
ctcagactacgtctttcaaacaagtgaggtcggtcatgttagactacgag
atgcaaaacccgctagactgcgtagtcactagagtgaagcatctcagtga
gcctcagctcttgttctcatactgggtctactaatggataacagtgcagg
ctagtcactcgcaccatattgtgagctataactctttatacataacacct
gcaaat
gaattctttatttactgaggtgttgttgtccattaagtagtcaggaactt
aagtaagataaacacatttccccagcctcattcttggggactatgtcaaa
gacaactgcgtatttcccaggatcaagagttgaatcagaagtccagcagc
tggttaaatgcgcaatgagatatcacagtttactttctaggacttgcaag
agctttcaaactggccattgtacgtcttagaaggtgatggaggaatgagg
attctttttcatccgaatcagttgtaaaatggcacctaacaacttaaatt
cccatcagtggcaagattttccctgtccaatctatttaattattagtgca
gcaggaggcctgtgattggccagggaaaagggaggtggagctaagagttg
cagggacagagagcaactcaggagggaggggggaaagaggcaagctggaa
ggtggtgaacaggatgtggctttaaatagccacaggtaaatatgttatcc
tatagagatagaataattagggtaccttgtctaatctaagtaggcagctt
gtaccatcattcaattggccctgaaattattgtgtgggcgtcttgtgaat
tgagaatttattgatatataaatctgtctaactataagcttctagagttt
tgtttctactgggttgctgggtgttgtggcagttgacagaggggtgggct
gtcgttgcgtggggctggcatggtagtgacctgccagggaacttagggaa
tccggtacagacatttcatgtgctctaggccggaaactactgagtgagaa
cacccgctggagcttattcctgcaacacccattagaattgaaggcagcac
atgttgtacatatcatgagcagtggttgctgagtagagagagacgtacat
taatgcatacattctcatgggggtgcagatctactggtcttatgggaaaa
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_94112618_94113825
seq2: B6Ng01-048P02.b_43_1198

seq1  GAATTCTCACTGGGAAATTCAAGGACTAGCTGTACAAAAAAAAAAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTGGGAAATTCAAGGACTAGCTGTACAAAAAAAAAAAAATC  50

seq1  GAGATACAACTCCCTCTTTTGTTACTAGAATTAATTGTATTTCTATGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACAACTCCCTCTTTTGTTACTAGAATTAATTGTATTTCTATGAAA  100

seq1  TAGATAAGGTCTTAAACTTATCCCTTCTGTATTATCCCACACTCACCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAGGTCTTAAACTTATCCCTTCTGTATTATCCCACACTCACCCTC  150

seq1  TTTGTGATTACAGGCAAACACATGGCTAAGGTCCTAATGTGTCCACTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGATTACAGGCAAACACATGGCTAAGGTCCTAATGTGTCCACTGCC  200

seq1  TTCTCAATCTCCTGTCCAATACGTGATTCCAAAGCTCAATGTCTATGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAATCTCCTGTCCAATACGTGATTCCAAAGCTCAATGTCTATGGGC  250

seq1  CCTAAAAGTGCACAGACAGGATAAAGTGTCTCATACCTAAGGCCGTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAAGTGCACAGACAGGATAAAGTGTCTCATACCTAAGGCCGTATAT  300

seq1  TTCTGAAAAGTTGTCTTCACTTTTGACCAGTGGTAAATATTCTCTAGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAAAGTTGTCTTCACTTTTGACCAGTGGTAAATATTCTCTAGGGT  350

seq1  TCTCCAGCTGCATGCCTGAGCAATGGATCTGAGGGGGAATACACAAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGCTGCATGCCTGAGCAATGGATCTGAGGGGGAATACACAAATAT  400

seq1  CTAGAAAACAATTTCCAATGACAAGATCAAGGTGAAAATCAATTAGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAACAATTTCCAATGACAAGATCAAGGTGAAAATCAATTAGAAAC  450

seq1  GGTCGTCATAGTACCTTCAATATTCTTCCCCTGACGTTAAGGTCATAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGTCATAGTACCTTCAATATTCTTCCCCTGACGTTAAGGTCATAGTC  500

seq1  ACCATCCTTGGTAACATTGTTTGTAACTTGGAGTTCCTTGCAGGTGGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCTTGGTAACATTGTTTGTAACTTGGAGTTCCTTGCAGGTGGTTA  550

seq1  GTAATTTACCTTCAAAGATAAATTAATGCGGCAAGTCAGGAGCGAGCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTACCTTCAAAGATAAATTAATGCGGCAAGTCAGGAGCGAGCAAG  600

seq1  TTCCACACAGCACGAACTCGACCATCAGAACCATCACTGTACTCCGAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACACAGCACGAACTCGACCATCAGAACCATCACTGTACTCCGAAGG  650

seq1  TCTGACAGTTTGTGTTGCAGGGTGTGACAACTGCATAGATCTATGCTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAGTTTGTGTTGCAGGGTGTGACAACTGCATAGATCTATGCTGAC  700

seq1  ATTTTAACTGGAACTTAGGAACACCGGATGCTGGGAAGAGTTTGGAGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAACTGGAACTTAGGAACACCGGATGCTGGGAAGAGTTTGGAGTCT  750

seq1  ATTACTTACAGTCATTGGCATAACATTTCTTTTGGGCATCTGGCTTTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTACAGTCATTGGCATAACATTTCTTTTGGGCATCTGGCTTTAAA  800

seq1  CGCTTTAAACATAAGTCACTGGGCCAACCGTTCTCAGTCCTGCATGCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTAAACATAAGTCACTGGGCCAACCGTTCTCAGTCCTGCATGCTAC  850

seq1  TCTTCTCTCCATTATCCCAATTCCACAAGTTACTGAGCACTGTCAACACA  900
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TC-TCTCTCCATTATCCCAATTCCACAAGTTACTGAGCACTGTCAACACA  899

seq1  GTAAAGTTTGAGGTAAAATAGATAACAAATAATGAGGCCAGGAACCCCAC  950
      ||||||||||| ||||||||||| |||||| |||||  |||  |||||||
seq2  GTAAAGTTTGA-GTAAAATAGAT-ACAAAT-ATGAG--CAG--ACCCCAC  942

seq1  ACTGCCTTCTCCAAGACTACGGTCTTTCAAAACAAAGTGAGGGTCGGTCA  1000
      |||||||||||  ||||||| ||||||||||   |||||| |||||||||
seq2  ACTGCCTTCTC--AGACTAC-GTCTTTCAAA--CAAGTGA-GGTCGGTCA  986

seq1  TGGTTAGAACTACCGAAGATGCAAAAACACGCTAGGACTGCGTAGTCACT  1050
      | ||||| |||||   |||||| ||||| ||||| |||||||||||||||
seq2  T-GTTAG-ACTAC--GAGATGC-AAAACCCGCTA-GACTGCGTAGTCACT  1030

seq1  AGAGTGAAAGCATCCTTCAGGGTGAGCCTTCAGCTCTTGTTTCTCAGTGA  1100
      |||||| |||||||  |||  ||||||| |||||||||| ||||||   |
seq2  AGAGTG-AAGCATC--TCA--GTGAGCC-TCAGCTCTTG-TTCTCA--TA  1071

seq1  CTGGGTTCTTACTTATTTTGTATTTATCAGTTGCATGCTATAGTCATCTG  1150
      ||||||   |||| |   || |  || ||| |||| ||  |||||| || 
seq2  CTGGGT--CTACTAA---TGGA--TAACAG-TGCAGGC--TAGTCA-CTC  1110

seq1  GTCAACATTAATTGATGAGGCTTATTAAAACTCCTTATATACATAACACA  1200
      | || |||  |||| ||||      || |||||  | |||||||||||| 
seq2  G-CACCAT--ATTG-TGAG-----CTATAACTC--TTTATACATAACAC-  1148

seq1  CTGCAAAT  1208
      ||||||||
seq2  CTGCAAAT  1156

seq1: chr15_94280525_94281485
seq2: B6Ng01-048P02.g_67_1017 (reverse)

seq1  TTTTTCCCATACAGCACAGTAGCTCTGCCACCCCCATGAGAATGTTTGCA  50
      ||||||||||| ||  |||||| |||| ||||||||||||||||| ||||
seq2  TTTTTCCCATA-AGACCAGTAGATCTG-CACCCCCATGAGAATGTATGCA  48

seq1  TTAATGTAACGTCTCTTCTCTACTCAGCAACCACCTGCTCATGACTATGT  100
      ||||||| ||||||| ||||||||||||||||| |||||||||| |||||
seq2  TTAATGT-ACGTCTC-TCTCTACTCAGCAACCA-CTGCTCATGA-TATGT  94

seq1  AACAACCTGTGCTGCCTTCTATTTCTGATGGGTGTTGCAGGAAT-AGCTC  149
       ||||| |||||||||||| | |||| ||||||||||||||||| |||||
seq2  -ACAACATGTGCTGCCTTC-AATTCTAATGGGTGTTGCAGGAATAAGCTC  142

seq1  CAGCCGGGTGTTCTCCACTCAGTGGTTTCCGGCCTAGAGCACCTGAAATG  199
      ||| |||||||||| |||||||| |||||||||||||||||| |||||||
seq2  CAG-CGGGTGTTCT-CACTCAGTAGTTTCCGGCCTAGAGCACATGAAATG  190

seq1  TCTGTACCGGATTCCCTAAGTTCCCTTGGCAGGTCACTACCATGCCAGCC  249
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCTGTACCGGATTCCCTAAGTTCCC-TGGCAGGTCACTACCATGCCAGCC  239

seq1  CCACGCAACGACAGCCCACCCCTCTGTCAACTGCCACAACACCCAGCAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGCAACGACAGCCCACCCCTCTGTCAACTGCCACAACACCCAGCAAC  289

seq1  CCAGTAGAAACAAAACTCTAGAAGCTTATAGTTAGACAGATTTATATATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAGAAACAAAACTCTAGAAGCTTATAGTTAGACAGATTTATATATC  339

seq1  AATAAATTCTCAATTCACAAGACGCCCACACAATAATTTCAGGGCCAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTCTCAATTCACAAGACGCCCACACAATAATTTCAGGGCCAATT  389

seq1  GAATGATGGTACAAGCTGCCTACTTAGATTAGACAAGGTACCCTAATTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATGGTACAAGCTGCCTACTTAGATTAGACAAGGTACCCTAATTAT  439

seq1  TCTATCTCTATAGGATAACATATTTACCTGTGGCTATTTAAAGCCACATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTCTATAGGATAACATATTTACCTGTGGCTATTTAAAGCCACATC  489

seq1  CTGTTCACCACCTTCCAGCTTGCCTCTTTCCCCCCTCCCTCCTGAGTTGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCACCACCTTCCAGCTTGCCTCTTTCCCCCCTCCCTCCTGAGTTGC  539

seq1  TCTCTGTCCCTGCAACTCTTAGCTCCACCTCCCTTTTCCCTGGCCAATCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCCCTGCAACTCTTAGCTCCACCTCCCTTTTCCCTGGCCAATCA  589

seq1  CAGGCCTCCTGCTGCACTAATAATTAAATAGATTGGACAGGGAAAATCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTCCTGCTGCACTAATAATTAAATAGATTGGACAGGGAAAATCTT  639

seq1  GCCACTGATGGGAATTTAAGTTGTTAGGTGCCATTTTACAACTGATTCGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGATGGGAATTTAAGTTGTTAGGTGCCATTTTACAACTGATTCGG  689

seq1  ATGAAAAAGAATCCTCATTCCTCCATCACCTTCTAAGACGTACAATGGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAAGAATCCTCATTCCTCCATCACCTTCTAAGACGTACAATGGCC  739

seq1  AGTTTGAAAGCTCTTGCAAGTCCTAGAAAGTAAACTGTGATATCTCATTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAAAGCTCTTGCAAGTCCTAGAAAGTAAACTGTGATATCTCATTG  789

seq1  CGCATTTAACCAGCTGCTGGACTTCTGATTCAACTCTTGATCCTGGGAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATTTAACCAGCTGCTGGACTTCTGATTCAACTCTTGATCCTGGGAAA  839

seq1  TACGCAGTTGTCTTTGACATAGTCCCCAAGAATGAGGCTGGGGAAATGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCAGTTGTCTTTGACATAGTCCCCAAGAATGAGGCTGGGGAAATGTG  889

seq1  TTTATCTTACTTAAGTTCCTGACTACTTAATGGACAACAACACCTCAGTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTACTTAAGTTCCTGACTACTTAATGGACAACAACACCTCAGTA  939

seq1  AATAAAGAATTC  961
      ||||||||||||
seq2  AATAAAGAATTC  951