BAC Information

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BAC

Clone NameB6Ng01-049J05
Chromosome15 (Build37)
Map Location 46,189,896 - 46,268,618
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039389, EG432951
Downstream geneLOC100039438, LOC665130
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049J05.bB6Ng01-049J05.g
ACCDH873797DH873798
length1,048929
definitionDH873797|Mus musculus domesticus DNA, BAC clone: B6Ng01-049J05, 5' end.DH873798|Mus musculus domesticus DNA, BAC clone: B6Ng01-049J05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,267,570 - 46,268,618)(46,189,896 - 46,190,849)
sequence
gaattcttgcttgaatatccacatttcaagggatattgtattagttaatt
acctggccatagattacctacttaattttgaatggcatgtttgtgtatta
tagtacattttgctaagtgcatatagataaaactctgcaatatatagaaa
ataaagggcatgtaacaaaatggctgcaagggcatatttgattaaagtga
aataaactcaaattctcctcttttatgttatttcctggctttattttact
aaatgggcagaatgacttttgttagggtttaaaattcaagtttttgtctt
tattggaattgtatgtttaagggactttatagtggatctaagttacagca
tttataatattttaattgaaattagcaaaacacatcatgtaagagaatgt
attacatcaactataaattggcccctttattagtgttctgtcttagaagt
tggatatagtagctaatttaaaggcttaatttgaagtacaaactcaaaca
atacaaatataaggtttttaaaaggatagatagatataatcatcaaattc
atagacatttctagttcatatgattaaaacattgtgtaaggattctgtat
agagaaaacacaaatcctgaagaggaaaacataagctgatactgacattt
tgaataaaattgatgtgtctttgtgtcatttgtctttcagactgggatca
aagttggtaccatgggaatagttatttaatagaaagcagaatatttgtga
caactgccattcctattcaacaaattggcaagcaatgcatcaaaatcatg
taaactcagtaaaaaaaagcttaaataaaatacagaattggccaaaaata
aaactacttcaggtcagaaaattgttttgaatgtattgtagccacaacca
tgttttgaagaagaaactcagcacctggaagaaatatatcccataaccta
cagaaaggaggctttggtctggttatgaggcgtgatagtaccaggcaaat
cctcttcagtaaagattgcaacctcttacgaagagctgaactgttgca
gaattccatgcgtttggcaagttgtatcttatatcttgggtatcctaagt
ttctgggctaatatccacttatcagtgagtacatattgtgcgagttcctt
tgtgattgggttttattgattttaaggtataataaaaacttagacttgtt
taaatttaatttccttaattactaaagaagatgaacattttttgagttac
ttaaaatgtacttttatgtcttctcaaaagaacatttgtttagaagccaa
gcccaattttaattggaccacttgtttccttgacaaattatttgttcttt
gtacatcttgactattagtacaatttcacatgtatagctctataatattc
tcatttactctttttatttattttcacacagttgattaaaaaatgtttgt
tatataaaaggtttctattttgttgctgttgtttccaatcatcagttggc
cttaatcccttgaaaactgaaaactgattactgttttaaaactttttccc
tacactttccttttctttaaattctctctctctctctctctctctctctc
tctctctctctctcacacacacacacacacacacacacacacacacacac
acccttaaatatataaatataattgctcaatagattaattacttatatgg
gtttagagtatattataagaacttccttgcgctcttgattagggaagatc
gtttctcttgcttttagctgttatgaatgcagtacatctttctctaactg
aggtcggagagtttctgcttccgggctaccattctatttgtgtgtcttac
tccatcttgtttgggtaccatgttcatgaaaatttaaatgggtctagcta
ttttctgggtgatgcgtattgaaaacatatactaacatatcgaagtagca
ccattatatatgaggagaaattcccaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_46267570_46268618
seq2: B6Ng01-049J05.b_45_1092 (reverse)

seq1  TGCATACAGTTCAGCTCTCTGTAGGAGGGTTGCAATCTTTACTGAGGAGA  50
      |||| |||||||||||||  ||| || |||||||||||||||||| ||| 
seq2  TGCA-ACAGTTCAGCTCTTCGTAAGA-GGTTGCAATCTTTACTGAAGAG-  47

seq1  GTTCTGCCTTGTACTTTCACGCCTCATAACCAGA-CAAAGCCTCCTTTCT  99
      | | ||||| ||||| |||||||||||||||||| |||||||||||||||
seq2  GATTTGCCTGGTACTATCACGCCTCATAACCAGACCAAAGCCTCCTTTCT  97

seq1  GTTATGCTATTGGATTATATTTCTTCCAAGTGCTGAGGTTTCTCTTCAAA  149
      | || | ||| ||| ||||||||||||| |||||||| ||  ||||||||
seq2  G-TAGGTTATGGGA-TATATTTCTTCCAGGTGCTGAGTTTCTTCTTCAAA  145

seq1  ACATGGTTGTGGCTACATTACATTCAAAAACATATTTCTGACCTG-AGTA  198
      ||||||||||||||||| ||||||| ||||||  ||||||||||| ||||
seq2  ACATGGTTGTGGCTACAATACATTC-AAAACAATTTTCTGACCTGAAGTA  194

seq1  GTTTTATTTTTGGCC-ATTCTGTATTTTA-TTCAGCTTTTTTTTACTGAG  246
      ||||||||||||||| ||||||||||||| || |||||||||||||||||
seq2  GTTTTATTTTTGGCCAATTCTGTATTTTATTTAAGCTTTTTTTTACTGAG  244

seq1  TTTACATGATTTTGATGCATTGCTTGCCAATTTGTTGAATAGGAATGGCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATGATTTTGATGCATTGCTTGCCAATTTGTTGAATAGGAATGGCA  294

seq1  GTTGTCACAAATATTCTGCTTTCTATTAAATAACTATTCCCATGGTACCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCACAAATATTCTGCTTTCTATTAAATAACTATTCCCATGGTACCA  344

seq1  ACTTTGATCCCAGTCTGAAAGACAAATGACAC-AAGACACATCAATTTTA  395
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTTTGATCCCAGTCTGAAAGACAAATGACACAAAGACACATCAATTTTA  394

seq1  TTCAAAATGTCAGTATCAGCTTATGTTTTCCTCTTCAGGATTTGTGTTTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATGTCAGTATCAGCTTATGTTTTCCTCTTCAGGATTTGTGTTTT  444

seq1  CTCTATACAGAATCCTTACACAATGTTTTAATCATATGAACTAGAAATGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATACAGAATCCTTACACAATGTTTTAATCATATGAACTAGAAATGT  494

seq1  CTATGAATTTGATGATTATATCTATCTATCCTTTTAAAAACCTTATATTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAATTTGATGATTATATCTATCTATCCTTTTAAAAACCTTATATTT  544

seq1  GTATTGTTTGAGTTTGTACTTCAAATTAAGCCTTTAAATTAGCTACTATA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTTTGAGTTTGTACTTCAAATTAAGCCTTTAAATTAGCTACTATA  594

seq1  TCCAACTTCTAAGACAGAACACTAATAAAGGGGCCAATTTATAGTTGATG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTTCTAAGACAGAACACTAATAAAGGGGCCAATTTATAGTTGATG  644

seq1  TAATACATTCTCTTACATGATGTGTTTTGCTAATTTCAATTAAAATATTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACATTCTCTTACATGATGTGTTTTGCTAATTTCAATTAAAATATTA  694

seq1  TAAATGCTGTAACTTAGATCCACTATAAAGTCCCTTAAACATACAATTCC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCTGTAACTTAGATCCACTATAAAGTCCCTTAAACATACAATTCC  744

seq1  AATAAAGACAAAAACTTGAATTTTAAACCCTAACAAAAGTCATTCTGCCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGACAAAAACTTGAATTTTAAACCCTAACAAAAGTCATTCTGCCC  794

seq1  ATTTAGTAAAATAAAGCCAGGAAATAACATAAAAGAGGAGAATTTGAGTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTAAAATAAAGCCAGGAAATAACATAAAAGAGGAGAATTTGAGTT  844

seq1  TATTTCACTTTAATCAAATATGCCCTTGCAGCCATTTTGTTACATGCCCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCACTTTAATCAAATATGCCCTTGCAGCCATTTTGTTACATGCCCT  894

seq1  TTATTTTCTATATATTGCAGAGTTTTATCTATATGCACTTAGCAAAATGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTATATATTGCAGAGTTTTATCTATATGCACTTAGCAAAATGT  944

seq1  ACTATAATACACAAACATGCCATTCAAAATTAAGTAGGTAATCTATGGCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAATACACAAACATGCCATTCAAAATTAAGTAGGTAATCTATGGCC  994

seq1  AGGTAATTAACTAATACAATATCCCTTGAAATGTGGATATTCAAGCAAGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATTAACTAATACAATATCCCTTGAAATGTGGATATTCAAGCAAGA  1044

seq1  ATTC  1049
      ||||
seq2  ATTC  1048

seq1: chr15_46189896_46190849
seq2: B6Ng01-049J05.g_67_995

seq1  GAATTCCATGCGTTTGGCAAGTTGTATCTTATATCTTGGGTATCCTAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCGTTTGGCAAGTTGTATCTTATATCTTGGGTATCCTAAGT  50

seq1  TTCTGGGCTAATATCCACTTATCAGTGAGTACATATTGTGCGAGTTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGCTAATATCCACTTATCAGTGAGTACATATTGTGCGAGTTCCTT  100

seq1  TGTGATTGGGTTTTATTGATTTTAAGGTATAATAAAAACTTAGACTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGGGTTTTATTGATTTTAAGGTATAATAAAAACTTAGACTTGTT  150

seq1  TAAATTTAATTTCCTTAATTACTAAAGAAGATGAACATTTTTTGAGTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTAATTTCCTTAATTACTAAAGAAGATGAACATTTTTTGAGTTAC  200

seq1  TTAAAATGTACTTTTATGTCTTCTCAAAAGAACATTTGTTTAGAAGCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGTACTTTTATGTCTTCTCAAAAGAACATTTGTTTAGAAGCCAA  250

seq1  GCCCAATTTTAATTGGACCACTTGTTTCCTTGACAAATTATTTGTTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAATTTTAATTGGACCACTTGTTTCCTTGACAAATTATTTGTTCTTT  300

seq1  GTACATCTTGACTATTAGTACAATTTCACATGTATAGCTCTATAATATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATCTTGACTATTAGTACAATTTCACATGTATAGCTCTATAATATTC  350

seq1  TCATTTACTCTTTTTATTTATTTTCACACAGTTGATTAAAAAATGTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTACTCTTTTTATTTATTTTCACACAGTTGATTAAAAAATGTTTGT  400

seq1  TATATAAAAGGTTTCTATTTTGTTGCTGTTGTTTCCAATCATCAGTTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAAAGGTTTCTATTTTGTTGCTGTTGTTTCCAATCATCAGTTGGC  450

seq1  CTTAATCCCTTGAAAACTGAAAACTGATTACTGTTTTAAAACTTTTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCCCTTGAAAACTGAAAACTGATTACTGTTTTAAAACTTTTTCCC  500

seq1  TACACTTTCCTTTTCTTTAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTTCCTTTTCTTTAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTC  550

seq1  TCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACAC  600

seq1  ACCCTTAAATATATAAATATAAATTGCTCAATAGATAAATTACTTATATG  650
      |||||||||||||||||||| ||||||||||||||| |||||||||||||
seq2  ACCCTTAAATATATAAATAT-AATTGCTCAATAGATTAATTACTTATATG  649

seq1  GTTTCAGAGTATATTATTAAGAAACTTCCTTGGGCTCTTGATTAGGGAAG  700
      | || ||||||||||| |||| |||||||||| |||||||||||||||||
seq2  GGTTTAGAGTATATTA-TAAG-AACTTCCTTGCGCTCTTGATTAGGGAAG  697

seq1  ATCGTTTCTCTTGCTTTAAGCTGTTCATGAATGCCAGTACATCTTTCTCT  750
      ||||||||||||||||| ||||||| ||||||| ||||||||||||||||
seq2  ATCGTTTCTCTTGCTTTTAGCTGTT-ATGAATG-CAGTACATCTTTCTCT  745

seq1  AAACTTGAGGTTCTGAGAGTTTTCTGCTTTCCAGGCTAGCATTTCTATTT  800
      ||   ||||| || ||||| ||||||| |||| ||||| || ||||||||
seq2  AA--CTGAGG-TCGGAGAG-TTTCTGC-TTCCGGGCTACCA-TTCTATTT  789

seq1  GTGTTGTCTTTACTCCATTCTTGTTTGGGTACCCATGTTCATGAAAATTC  850
      ||| |||| |||||||| ||||||||||||| ||||||||||||||||| 
seq2  GTG-TGTC-TTACTCCA-TCTTGTTTGGGTA-CCATGTTCATGAAAATT-  834

seq1  TAAATGGGTCTAGCATATATGCTGGGTGATGCGAAATTTGAAAACATATT  900
      |||||||||||||| ||| | |||||||||||| |  ||||||||||| |
seq2  TAAATGGGTCTAGC-TATTTTCTGGGTGATGCGTA--TTGAAAACATA-T  880

seq1  ACAAACAAGATTGAAAGATGCACACATTATATATGAGTGAGAAATTCACC  950
      || ||| | || | |||  |||| ||||||||||||| ||||||||| ||
seq2  ACTAAC-ATATCG-AAGTAGCAC-CATTATATATGAG-GAGAAATTC-CC  925

seq1  AGGC  954
      ||||
seq2  AGGC  929