BAC Information

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BAC

Clone NameB6Ng01-050B04
Chromosome15 (Build37)
Map Location 63,577,383 - 63,578,493
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040430, Tsg101-ps, EG239502, EG432959
Downstream geneLOC672194, Mlze, AI987692, Gsdmdc2, 9930109F21Rik, LOC665769, 9030605I04Rik, 4933426G20Rik, 0910001A06Rik, Ddef1, Adcy8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050B04.bB6Ng01-050B04.g
ACCDH874132DH874133
length1,1051,120
definitionDH874132|Mus musculus domesticus DNA, BAC clone: B6Ng01-050B04, 5' end.DH874133|Mus musculus domesticus DNA, BAC clone: B6Ng01-050B04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttccgacttatggcttccaaaactataagaaaatgtttaagt
tgttatagtccacaaagttagtaacagcttatcaaagccacaattgggaa
acaatcctaaacttgaataagaacataaatgtatctcctttgtacacatc
tcttttgaaaggcagcctgacagaagagagagaccaatgggtttgctgtg
agagatgtcagtttatatggtttctttctttgcgtaagtggccagacttc
tcacagtctttaagtgtttcatctctgaaatggaactaaacatggtcatt
aagtatccactgccaaaccacacagaaggtactcaagagctgtagaattc
tttccatggaagatgcacagagtcctatgtctttcccccctagagctagt
cattgcagacccagctcttgagctttggtcaatgtgcacaggccactttc
catttctaagatctgacttctagctgcttttccaggttctgtctgaaaga
tgagatcctgctatgaaccccaagagataatgctttggtttccattgcca
tcccttatggatacatctcaccttgtcactctccttctgccctcattcat
gagtcagaggtcccttttggtgatctgttattagcttaaagctacgttgc
caggagtacaccagctctccactccttcactctacttaaagagtgctaga
gatggccagaacctttctcttacccattgggaataacaccgtcataattg
ttacaaacagcaataatggtaggtaaatgctgggtacttagcactgtact
ggggactggggtttctttctcatccttcccatttttttttctggaaggat
gcctgcaaagtggacatactggaattatgcaataagagattcagccaatc
gatattccattgtggaaggggaatggtctcatgaggcccacctcttatga
ggcacataggcagttaatagtttcttggggtaaagtcactttcttcaatg
ttgtaaccacttgcttcaaatcaatacctccgacccatgttcatgcaaac
cctaattgaactcacctggggtcacgcatgttactaagacaacttgaggt
aggat
gaattcacccagtgggaggtaccatccctacacagagcatgaggcagtga
gagagccagtaagcagcatttctctatggttctcgcatccaggttcttcc
atgagtccctgactgacttccctcaaagacagttatgacctgggagtgta
agatgaactaaatccttccctcgacatgcttgtagccatggtggttatcc
cagcaacagaaagcaaactaggaaacgacattcaccttcaatatctgaaa
gccagcaacggtacagaccccaaacccttcttttttaaaatttatattta
atttttttgagcatttcacatgagtactttattttctctgtcttcaactt
cctctcttccttctccaacttttcctgtgttcagcgctccctgtaaagtt
catgaattcttctttaattattgttgtacacgtgcccacatatttataca
taaatgcagtctgctgagttccttttgtgttgcctctatgtgcatatgct
tggggttgagcacttgggattggatgacctatcagctgtttgaccctgta
gaagactgattctcctctcagcagtcactatttgtttatagatctccctg
tatgcttagggctttgtgatattttccacagcaggcaactacactgcagt
gccagcttgtgttgttactgggtaggtcttttttaggtgactctaatttt
gagattttatgaatacagctatcgtgtcatttcttggtgacagcaatctc
acagcagatttccagatcctctggctcttacagtcgttccattccctctt
ccatgatgttccctgagcctctggtgtaggggttattttatagatttgtc
atccataggtgggcaatgcatagttgattggtctctgcattttgatgagt
tgcacatttctgtaatgtgcctgtctcagtcattgtccttttgctgtgaa
gagacaccatgatcaagcaatttttatgaggattaactgggccttgccta
agttcaaagagtagtccattatcatggtgggaacatgtgtgtatgcggca
gctgatgtctcgaataactgagagttttctttggattcacaggcaggggc
caagggtgaaagggggtgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_63577383_63578493
seq2: B6Ng01-050B04.b_48_1152

seq1  GAATTCATTTCCGACTTATGGCTTCCAAAACTATAAGAAAATGTTTAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCCGACTTATGGCTTCCAAAACTATAAGAAAATGTTTAAGT  50

seq1  TGTTATAGTCCACAAAGTTAGTAACAGCTTATCAAAGCCACAATTGGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAGTCCACAAAGTTAGTAACAGCTTATCAAAGCCACAATTGGGAA  100

seq1  ACAATCCTAAACTTGAATAAGAACATAAATGTATCTCCTTTGTACACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCTAAACTTGAATAAGAACATAAATGTATCTCCTTTGTACACATC  150

seq1  TCTTTTGAAAGGCAGCCTGACAGAAGAGAGAGACCAATGGGTTTGCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGAAAGGCAGCCTGACAGAAGAGAGAGACCAATGGGTTTGCTGTG  200

seq1  AGAGATGTCAGTTTATATGGTTTCTTTCTTTGCGTAAGTGGCCAGACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGTCAGTTTATATGGTTTCTTTCTTTGCGTAAGTGGCCAGACTTC  250

seq1  TCACAGTCTTTAAGTGTTTCATCTCTGAAATGGAACTAAACATGGTCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTCTTTAAGTGTTTCATCTCTGAAATGGAACTAAACATGGTCATT  300

seq1  AAGTATCCACTGCCAAACCACACAGAAGGTACTCAAGAGCTGTAGAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCCACTGCCAAACCACACAGAAGGTACTCAAGAGCTGTAGAATTC  350

seq1  TTTCCATGGAAGATGCACAGAGTCCTATGTCTTTCCCCCCTAGAGCTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGGAAGATGCACAGAGTCCTATGTCTTTCCCCCCTAGAGCTAGT  400

seq1  CATTGCAGACCCAGCTCTTGAGCTTTGGTCAATGTGCACAGGCCACTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAGACCCAGCTCTTGAGCTTTGGTCAATGTGCACAGGCCACTTTC  450

seq1  CATTTCTAAGATCTGACTTCTAGCTGCTTTTCCAGGTTCTGTCTGAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTAAGATCTGACTTCTAGCTGCTTTTCCAGGTTCTGTCTGAAAGA  500

seq1  TGAGATCCTGCTATGAACCCCAAGAGATAATGCTTTGGTTTCCATTGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCCTGCTATGAACCCCAAGAGATAATGCTTTGGTTTCCATTGCCA  550

seq1  TCCCTTATGGATACATCTCACCTTGTCACTCTCCTTCTGCCCTCATTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTATGGATACATCTCACCTTGTCACTCTCCTTCTGCCCTCATTCAT  600

seq1  GAGTCAGAGGTCCCTTTTGGTGATCTGTTATTAGCTTAAAGCTACGTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGAGGTCCCTTTTGGTGATCTGTTATTAGCTTAAAGCTACGTTGC  650

seq1  CAGGAGTACACCAGCTCTCCACTCCTTCACTCTACTTAAAGAGTGCTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTACACCAGCTCTCCACTCCTTCACTCTACTTAAAGAGTGCTAGA  700

seq1  GATGGCCAGAACCTTTCTCTTACCCATTGGGAATAACACCGTCATAATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCAGAACCTTTCTCTTACCCATTGGGAATAACACCGTCATAATTG  750

seq1  TTACAAACAGCAATAATGGTAGGTAAATGCTGGGTACTTAGCACTGTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAACAGCAATAATGGTAGGTAAATGCTGGGTACTTAGCACTGTACT  800

seq1  GGGGACTGGGGTTTCTTTCTCATCCTTCCCATTTTTTTTTCTGGAAGGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTGGGGTTTCTTTCTCATCCTTCCCATTTTTTTTTCTGGAAGGAT  850

seq1  GCCTGCAAAGTGGACATACTGGAATTATGCAATAAGAGATTCAGCCAATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCAAAGTGGACATACTGGAATTATGCAATAAGAGATTCAGCCAATC  900

seq1  GATATTCCATTGTGGAAGGGGAATGGTCTCATGAGGCCCCACCTCTTATG  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GATATTCCATTGTGGAAGGGGAATGGTCTCATGAGG-CCCACCTCTTATG  949

seq1  AGGCACAATAGGCAGTTAATAGTTTCTTGGGGTAAAGTCACTTTCTTCAA  1000
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAC-ATAGGCAGTTAATAGTTTCTTGGGGTAAAGTCACTTTCTTCAA  998

seq1  TGTTGTAACCACTTGCTTCAAATCAATAACCTCCGACCCATGTTCATGCA  1050
      ||||||||||||||||||||||||||| ||||||||||||||||||||| 
seq2  TGTTGTAACCACTTGCTTCAAATCAAT-ACCTCCGACCCATGTTCATGC-  1046

seq1  AAAAACCCTAATTGAACTCAC--TGGGTCACGCATGTACATAAGACAGAC  1098
        |||||||||||||||||||   |||||||||||||   ||||||| ||
seq2  --AAACCCTAATTGAACTCACCTGGGGTCACGCATGTTACTAAGACA-AC  1093

seq1  ATGAGGGTAGGAT  1111
       ||| ||||||||
seq2  TTGA-GGTAGGAT  1105