BAC Information

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BAC

Clone NameB6Ng01-050F15
Chromosome15 (Build37)
Map Location 6,675,443 - 6,806,130
singlet/doubletdoublet
Overlap gene4921505C17Rik, Osmr
Upstream geneLOC666319, LOC100039358, LOC666323, Dab2, C9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511
Downstream geneLifr, Egflam, Gdnf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050F15.bB6Ng01-050F15.g
ACCDH874324DH874325
length1,1701,068
definitionDH874324|Mus musculus domesticus DNA, BAC clone: B6Ng01-050F15, 5' end.DH874325|Mus musculus domesticus DNA, BAC clone: B6Ng01-050F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,804,944 - 6,806,130)(6,675,443 - 6,676,518)
sequence
gaattccatccttttgtgtgggccttgtgtctgatcagagagctgttgtt
tcccactggctttgcctcttaatacttcaaccttctttggccacaccaga
accaagtttccaagaacctctgttggacactcggacagctatatagaaaa
tgttaagtcaaaacacatgacccaagttcgacaagggagtgagagtggag
ttgacaggattccagaagttcaactttctgttatttttttctttttatca
taatcatgtctcttgacactccttttgatgtaatagtcacataagattaa
ggttttttttacggttacggcgaaacaatcattatttcataatattgctg
gaaccatgctggtgggagtgaagatattctaattttgtgtgtgtttccca
agaagagatttcccagttctaaggacttgttaggccatcttgcaggaaga
ctggagctgagccagtgatgggcaggaccacaccttgagtggaattgctt
agtgacaatgacgcacaccgcttgccttctgttgaaacctacacctcatt
tcaagccggacctagagtgtttctcttgccaatgcggtcaaattgagtct
gcctgctttctctgctgtacttattactcatgtctttcgttggcttatta
gagatgaatagtggagccctgcttcttgatgctgccagggcacaggctac
ctaacaactccagagacacagcctctggcggctcaaaacattaataccta
ttaagcaaaggtttttggttcttctccctccaatgctggcaactaccaga
cctccctcttgctgtttctacaggtttaccttttctagatatttcacata
agtgaaaccatgtaatacgtaactctggattcttttacttatcatgtttt
gagttccatccaatcagtagcatgggtcacccactctctccttttactac
tgagcagtatagttgcactttatggagaatcacctgaagttttccaccct
ttgctgtttgtaaatggcgctatgcaacattcacaggcagatgttttttg
gattcggttcactgggagatgaaatggggggtagaacaaggaatctcatg
ctggtctacttttaattcctattgaacttcccaaaaaaaatatacgaggc
tccccagtgaatgggccatt

gaattccaggacagccagggctacacagagaaaccctgtctcgaaaaaca
aaaaaacaaacaaaaaaaaagaatatatggaaatagcagaatgtagcatg
gtactatttcctaggtttcaaaccacactcatctgagtatactgcagagc
tgagatgtctttgtgcctctgggctgttactagtttctgagtgtggtgtg
cctccctacattcatagatgacacgtgttagactcgggctgagctgcagc
ctcgtttatagagaaaaccaaacaggaaagtacgtgtgaatatgcaaggt
gtgcacacagctcctgagcagttgtagaggatttagaattaatctcacta
ggtgtagagttaatctcattattggggtatataacacagttaattgtttt
ttgcatttagacacagatgttctgttctttcatggggttcatttaaattg
tgagttattttaaaggcaaacaatttttctcttataataaagggctccta
attagaggactgtggatgcctaattaccttgcaattatcattgtaagata
tgaaggttgacatagaaatgatagcagcacatgcagtattgtagtcatta
agcaaaattgtaggtttttttcatattttctcaagaaaaaataccatgaa
aattattgttaccaacatttctttgaatgacagaaatttctgtagcctga
aaattggcctttgtaaattttttagtacatacttgtgcacaaagtaaaag
tgctttgtgtgtttgattcaatcctctgtgttttgttctaaaactgggtc
ttatgtagcccaagatggttggaacttcctgtgtccaaggttgagttttt
aacacctgccccttcatctcccaagtactgggattacaggcatgtgccac
catacctggacattacgttttttttctgggcatttatttgctacacatgt
gtactatattcccatatatgacaggaaagaggcaaaatttaggaaggact
tgatttcttttcatcttttcagtagccctttctaactagttcttaggaac
tttaacttgaaaggctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_6804944_6806130
seq2: B6Ng01-050F15.b_45_1214 (reverse)

seq1  AATGGCCCA-TCACTGGGGAAGACCTTCTGATAATTTTTTTTTTGGAAAG  49
      ||||||||| ||||||||||   |||  |    || |||||||||| |||
seq2  AATGGCCCATTCACTGGGGA--GCCTCGT----ATATTTTTTTTGGGAAG  44

seq1  TTACAATA-GAATTATAAAGTAAGACCCAGCAATGAGATTCCTAGGTCTA  98
      || ||||| |||||| ||||| ||| ||||| ||||||||||| | ||||
seq2  TT-CAATAGGAATTA-AAAGT-AGA-CCAGC-ATGAGATTCCTTGTTCTA  89

seq1  CACCCCA-TTCATCTCCCAAGTGAAACCGGATTCAATAAAACATCTGCCT  147
      | ||||| |||||||||| |||| ||||| || ||| |||||||||||||
seq2  CCCCCCATTTCATCTCCC-AGTG-AACCGAATCCAA-AAAACATCTGCCT  136

seq1  GTGAATGTTTGCATTAGCGCCATTTACAAACAGCAAAGGGTGGAAAAACT  197
      ||||||| ||||| ||||||||||||||||||||||||||||| ||||||
seq2  GTGAATG-TTGCA-TAGCGCCATTTACAAACAGCAAAGGGTGG-AAAACT  183

seq1  TCAGGTGATTTCTCCATAAAGTGCAACTATACTGCTCAGTAGTAAAAAGG  247
      |||||||| ||||||||||||||||||||||||||||||||||||||  |
seq2  TCAGGTGA-TTCTCCATAAAGTGCAACTATACTGCTCAGTAGTAAAA--G  230

seq1  GAGAGAGTGGGTGACCCATGCTACTGATTGGATGGAACTCAAAACATGAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGTGGGTGACCCATGCTACTGATTGGATGGAACTCAAAACATGAT  280

seq1  AAGTAAAAGAATCCAGAGTTACGTATTACATGGTTTCACTTATGTGAAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAGAATCCAGAGTTACGTATTACATGGTTTCACTTATGTGAAAT  330

seq1  ATCTAGAAAAGGTAAACCTGTAGAAACAGCAAGAGGGAGGTCTGGTAGTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAAAAGGTAAACCTGTAGAAACAGCAAGAGGGAGGTCTGGTAGTT  380

seq1  GCCAGCATTGGAGGGAGAAGAACCAAAAACCTTTGCTTAATAGGTATTAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCATTGGAGGGAGAAGAACCAAAAACCTTTGCTTAATAGGTATTAA  430

seq1  TGTTTTGAGCCGCCAGAGGCTGTGTCTCTGGAGTTGTTAGGTAGCCTGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGAGCCGCCAGAGGCTGTGTCTCTGGAGTTGTTAGGTAGCCTGTG  480

seq1  CCCTGGCAGCATCAAGAAGCAGGGCTCCACTATTCATCTCTAATAAGCCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCAGCATCAAGAAGCAGGGCTCCACTATTCATCTCTAATAAGCCA  530

seq1  ACGAAAGACATGAGTAATAAGTACAGCAGAGAAAGCAGGCAGACTCAATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAAGACATGAGTAATAAGTACAGCAGAGAAAGCAGGCAGACTCAATT  580

seq1  TGACCGCATTGGCAAGAGAAACACTCTAGGTCCGGCTTGAAATGAGGTGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCGCATTGGCAAGAGAAACACTCTAGGTCCGGCTTGAAATGAGGTGT  630

seq1  AGGTTTCAACAGAAGGCAAGCGGTGTGCGTCATTGTCACTAAGCAATTCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCAACAGAAGGCAAGCGGTGTGCGTCATTGTCACTAAGCAATTCC  680

seq1  ACTCAAGGTGTGGTCCTGCCCATCACTGGCTCAGCTCCAGTCTTCCTGCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGGTGTGGTCCTGCCCATCACTGGCTCAGCTCCAGTCTTCCTGCA  730

seq1  AGATGGCCTAACAAGTCCTTAGAACTGGGAAATCTCTTCTTGGGAAACAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCCTAACAAGTCCTTAGAACTGGGAAATCTCTTCTTGGGAAACAC  780

seq1  ACACAAAATTAGAATATCTTCACTCCCACCAGCATGGTTCCAGCAATATT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAATTAGAATATCTTCACTCCCACCAGCATGGTTCCAGCAATATT  830

seq1  ATGAAATAATGATTGTTTCGCCGTAACCGTAAAAAAAACCTTAATCTTAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATAATGATTGTTTCGCCGTAACCGTAAAAAAAACCTTAATCTTAT  880

seq1  GTGACTATTACATCAAAAGGAGTGTCAAGAGACATGATTATGATAAAAAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTATTACATCAAAAGGAGTGTCAAGAGACATGATTATGATAAAAAG  930

seq1  AAAAAAATAACAGAAAGTTGAACTTCTGGAATCCTGTCAACTCCACTCTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAACAGAAAGTTGAACTTCTGGAATCCTGTCAACTCCACTCTC  980

seq1  ACTCCCTTGTCGAACTTGGGTCATGTGTTTTGACTTAACATTTTCTATAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTTGTCGAACTTGGGTCATGTGTTTTGACTTAACATTTTCTATAT  1030

seq1  AGCTGTCCGAGTGTCCAACAGAGGTTCTTGGAAACTTGGTTCTGGTGTGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCCGAGTGTCCAACAGAGGTTCTTGGAAACTTGGTTCTGGTGTGG  1080

seq1  CCAAAGAAGGTTGAAGTATTAAGAGGCAAAGCCAGTGGGAAACAACAGCT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAAGGTTGAAGTATTAAGAGGCAAAGCCAGTGGGAAACAACAGCT  1130

seq1  CTCTGATCAGACACAAGGCCCACACAAAAGGATGGAATTC  1187
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATCAGACACAAGGCCCACACAAAAGGATGGAATTC  1170


seq1: chr15_6675443_6676518
seq2: B6Ng01-050F15.g_67_1134

seq1  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACA  50

seq1  AAAAAACAAACAAAAAAAAAGAATATATGGAAATAGCAGAATGTAGCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAACAAAAAAAAAGAATATATGGAAATAGCAGAATGTAGCATG  100

seq1  GTACTATTTCCTAGGTTTCAAACCACACTCATCTGAGTATACTGCAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATTTCCTAGGTTTCAAACCACACTCATCTGAGTATACTGCAGAGC  150

seq1  TGAGATGTCTTTGTGCCTCTGGGCTGTTACTAGTTTCTGAGTGTGGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGTCTTTGTGCCTCTGGGCTGTTACTAGTTTCTGAGTGTGGTGTG  200

seq1  CCTCCCTACATTCATAGATGACACGTGTTAGACTCGGGCTGAGCTGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTACATTCATAGATGACACGTGTTAGACTCGGGCTGAGCTGCAGC  250

seq1  CTCGTTTATAGAGAAAACCAAACAGGAAAGTACGTGTGAATATGCAAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTTTATAGAGAAAACCAAACAGGAAAGTACGTGTGAATATGCAAGGT  300

seq1  GTGCACACAGCTCCTGAGCAGTTGTAGAGGATTTAGAATTAATCTCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACACAGCTCCTGAGCAGTTGTAGAGGATTTAGAATTAATCTCACTA  350

seq1  GGTGTAGAGTTAATCTCATTATTGGGGTATATAACACAGTTAATTGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGAGTTAATCTCATTATTGGGGTATATAACACAGTTAATTGTTTT  400

seq1  TTGCATTTAGACACAGATGTTCTGTTCTTTCATGGGGTTCATTTAAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTAGACACAGATGTTCTGTTCTTTCATGGGGTTCATTTAAATTG  450

seq1  TGAGTTATTTTAAAGGCAAACAATTTTTCTCTTATAATAAAGGGCTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTATTTTAAAGGCAAACAATTTTTCTCTTATAATAAAGGGCTCCTA  500

seq1  ATTAGAGGACTGTGGATGCCTAATTACCTTGCAATTATCATTGTAAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGGACTGTGGATGCCTAATTACCTTGCAATTATCATTGTAAGATA  550

seq1  TGAAGGTTGACATAGAAATGATAGCAGCACATGCAGTATTGTAGTCATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTTGACATAGAAATGATAGCAGCACATGCAGTATTGTAGTCATTA  600

seq1  AGCAAAATTGTAGGTTTTTTTCATATTTTCTCAAGAAAAAATACCATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATTGTAGGTTTTTTTCATATTTTCTCAAGAAAAAATACCATGAA  650

seq1  AATTATTGTTACCAACATTTCTTTGAATGACAGAAATTTCTGTAGCCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTGTTACCAACATTTCTTTGAATGACAGAAATTTCTGTAGCCTGA  700

seq1  AAATTGGCCTTTGTAAATTTTTTAGTACATACTTGTGCACAAAGTAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGCCTTTGTAAATTTTTTAGTACATACTTGTGCACAAAGTAAAAG  750

seq1  TGCTTTGTGTGTTTGATTCAATCCTCTGTGTTTTGTTCTAAAACTGGGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTGTGTTTGATTCAATCCTCTGTGTTTTGTTCTAAAACTGGGTC  800

seq1  TTATGTAGCCCAAGATGGTTGGAACTTCCTGTGTCCAAGGTTGAGTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAGCCCAAGATGGTTGGAACTTCCTGTGTCCAAGGTTGAGTTTTT  850

seq1  AACACCTGCCCCTTCATCTCCCAAGTACTGGGATTACAGGCATGTGCCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTGCCCCTTCATCTCCCAAGTACTGGGATTACAGGCATGTGCCAC  900

seq1  CATACCTGGACAATTACGTTTTTTTTCTGGGCATTTATTTGCTACACATG  950
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATACCTGGAC-ATTACGTTTTTTTTCTGGGCATTTATTTGCTACACATG  949

seq1  TGTACTATATTCCCCAATATTATGACAAGAAAGAGGCAAAATTTAAGAAA  1000
      ||||||||||||||  ||| ||||||| |||||||||||||||| || ||
seq2  TGTACTATATTCCC--ATA-TATGACAGGAAAGAGGCAAAATTT-AGGAA  995

seq1  GGACTTGATTTCTTTTTCATCTATTCAGTAGCTCTTTCTACCTAGTTCTT  1050
      |||||||||||| ||||||||| ||||||||| ||||||| |||||||||
seq2  GGACTTGATTTC-TTTTCATCTTTTCAGTAGCCCTTTCTAACTAGTTCTT  1044

seq1  AGGTAACTTTTAACTTGAGAGGCTGA  1076
      ||| ||| |||||||||| |||||||
seq2  AGG-AAC-TTTAACTTGAAAGGCTGA  1068


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