BAC Information

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BAC

Clone NameB6Ng01-051A19
Chromosome15 (Build37)
Map Location 88,348,103 - 88,466,221
singlet/doubletdoublet
Overlap geneZdhhc25
Upstream geneAW049604, LOC100042329, LOC100042340
Downstream geneBrd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1, Adm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3, Acr, Rabl2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051A19.bB6Ng01-051A19.g
ACCDH874808DH874809
length3351,103
definitionDH874808|Mus musculus domesticus DNA, BAC clone: B6Ng01-051A19, 5' end.DH874809|Mus musculus domesticus DNA, BAC clone: B6Ng01-051A19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,465,887 - 88,466,221)(88,348,103 - 88,349,207)
sequence
tgccttctctttgggtgctgtaggaccagactcctggaggataatatgat
agaagaggcagatagggatgcccaccgttctcgcctaggattccctcagt
gagcaatcttctggctttacctgagtaaaccaactgagattagactctct
cagttggccccttgttcacgcgcagattccaggctcattttcagttgctg
ggtttgggatatttatcatgcaggaatagatggctggcagacaggactgg
aatggggctggcttgcagtttaccaggaacagggaggaggagccagagaa
gctgaagggaggggaggggagcgaaggggaggaga
gaattccaagagggaacaaggcagaatggagcagtaggctagggtttctt
attccattaagcatctattgtagagcaggaagcccagaaaatcccaactc
tgaccacaacagtgccttctttctctgagcacagatctgttctggctcct
gaagcagtttgaaacgtaactttgactgggcaatgggtatgtaacagtaa
gacattagggtgtcaatcacacatagcccctccccccactggcccttcct
atcctttgccagtcagaggctcatatttcataaaacctgcaaagagaaga
aagcactggaattaaaatgtgcttccatccgtaaatgagaagatgatgaa
agtccagaggacccctatccctgacagactccagactccatccagcctat
caccagcacacacatagtttgcacacctatttcatgattaacggatacag
actgtctcacactcaggggcttatcagagacagtcttggatctgagtcat
ttatcttttttacatcccccagatgggtgacagagacaggacaggatgag
aaggtgctttcaggggcattaaccctgcagggttatagggacagactgag
caataagtcttgggattcctggaggccctgagtcaggcagagatgaagtt
aagagtgtgttgatggagctctgtgggttgctgtgcagagaggactgatc
actggctaacttagataaggtgtgacccagacacggcaaaggagggaatg
aggacactgtcaaccatcaagactatgagcaaaaaaacagacagacagga
aggcagacagacaataactgccctctgcatcagctgccaaattccaattc
tgtccattcactgtgaaaggctctgaagcagtgaaagctgccacagtgcc
caagttagcaggcttgggtttagcctctatgtgtcctcctttctgtgact
gttgttcaagaccctgtctaaacagcatcctgtgctctctctgacttacc
cattagcatgcacaacctgtcagaagcacacgatcaactagctgctttcc
ttccgctaatgcagagatcaaatctagcacaataatgggggaggggagca
cct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_88465887_88466221
seq2: B6Ng01-051A19.b_50_384 (reverse)

seq1  TCTCCTCCCCTTCGCTCCCCTCCCCTCCCTTCAGCTTCTCTGGCTCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCCCTTCGCTCCCCTCCCCTCCCTTCAGCTTCTCTGGCTCCTCC  50

seq1  TCCCTGTTCCTGGTAAACTGCAAGCCAGCCCCATTCCAGTCCTGTCTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTTCCTGGTAAACTGCAAGCCAGCCCCATTCCAGTCCTGTCTGCC  100

seq1  AGCCATCTATTCCTGCATGATAAATATCCCAAACCCAGCAACTGAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTATTCCTGCATGATAAATATCCCAAACCCAGCAACTGAAAATG  150

seq1  AGCCTGGAATCTGCGCGTGAACAAGGGGCCAACTGAGAGAGTCTAATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGAATCTGCGCGTGAACAAGGGGCCAACTGAGAGAGTCTAATCTC  200

seq1  AGTTGGTTTACTCAGGTAAAGCCAGAAGATTGCTCACTGAGGGAATCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTTTACTCAGGTAAAGCCAGAAGATTGCTCACTGAGGGAATCCTA  250

seq1  GGCGAGAACGGTGGGCATCCCTATCTGCCTCTTCTATCATATTATCCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGAGAACGGTGGGCATCCCTATCTGCCTCTTCTATCATATTATCCTCC  300

seq1  AGGAGTCTGGTCCTACAGCACCCAAAGAGAAGGCA  335
      |||||||||||||||||||||||||||||||||||
seq2  AGGAGTCTGGTCCTACAGCACCCAAAGAGAAGGCA  335

seq1: chr15_88348103_88349207
seq2: B6Ng01-051A19.g_63_1165

seq1  GAATTCCAAGAGGGAACAAGGCAGAATGGAGCAGTAGGCTAGGGTTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAGGGAACAAGGCAGAATGGAGCAGTAGGCTAGGGTTTCTT  50

seq1  ATTCCATTAAGCATCTATTGTAGAGCAGGAAGCCCAGAAAATCCCAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTAAGCATCTATTGTAGAGCAGGAAGCCCAGAAAATCCCAACTC  100

seq1  TGACCACAACAGTGCCTTCTTTCTCTGAGCACAGATCTGTTCTGGCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACAACAGTGCCTTCTTTCTCTGAGCACAGATCTGTTCTGGCTCCT  150

seq1  GAAGCAGTTTGAAACGTAACTTTGACTGGGCAATGGGTATGTAACAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGTTTGAAACGTAACTTTGACTGGGCAATGGGTATGTAACAGTAA  200

seq1  GACATTAGGGTGTCAATCACACATAGCCCCTCCCCCCACTGGCCCTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTAGGGTGTCAATCACACATAGCCCCTCCCCCCACTGGCCCTTCCT  250

seq1  ATCCTTTGCCAGTCAGAGGCTCATATTTCATAAAACCTGCAAAGAGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTGCCAGTCAGAGGCTCATATTTCATAAAACCTGCAAAGAGAAGA  300

seq1  AAGCACTGGAATTAAAATGTGCTTCCATCCGTAAATGAGAAGATGATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTGGAATTAAAATGTGCTTCCATCCGTAAATGAGAAGATGATGAA  350

seq1  AGTCCAGAGGACCCCTATCCCTGACAGACTCCAGACTCCATCCAGCCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAGAGGACCCCTATCCCTGACAGACTCCAGACTCCATCCAGCCTAT  400

seq1  CACCAGCACACACATAGTTTGCACACCTATTTCATGATTAACGGATACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCACACACATAGTTTGCACACCTATTTCATGATTAACGGATACAG  450

seq1  ACTGTCTCACACTCAGGGGCTTATCAGAGACAGTCTTGGATCTGAGTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTCACACTCAGGGGCTTATCAGAGACAGTCTTGGATCTGAGTCAT  500

seq1  TTATCTTTTTTACATCCCCCAGATGGGTGACAGAGACAGGACAGGATGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTTTTACATCCCCCAGATGGGTGACAGAGACAGGACAGGATGAG  550

seq1  AAGGTGCTTTCAGGGGCATTAACCCTGCAGGGTTATAGGGACAGACTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGCTTTCAGGGGCATTAACCCTGCAGGGTTATAGGGACAGACTGAG  600

seq1  CAATAAGTCTTGGGATTCCTGGAGGCCCTGAGTCAGGCAGAGATGAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGTCTTGGGATTCCTGGAGGCCCTGAGTCAGGCAGAGATGAAGTT  650

seq1  AAGAGTGTGTTGATGGAGCTCTGTGGGTTGCTGTGCAGAGAGGACTGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGTGTTGATGGAGCTCTGTGGGTTGCTGTGCAGAGAGGACTGATC  700

seq1  ACTGGCTAACTTAGATAAGGTGTGACCCAGACACGGCAAAGGAGGGAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTAACTTAGATAAGGTGTGACCCAGACACGGCAAAGGAGGGAATG  750

seq1  AGGACACTGTCAACCATCAAGACTATGAGCAAAAAAACAGACAGACAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACTGTCAACCATCAAGACTATGAGCAAAAAAACAGACAGACAGGA  800

seq1  AGGCAGACAGACAATAACTGCCCTCTGCATCAGCTGCCAAATTCCAATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGACAGACAATAACTGCCCTCTGCATCAGCTGCCAAATTCCAATTC  850

seq1  TGTCCATTCACTGTGAAAGGCCCTGAAGCAGTGAAAGCTGCCACAGTGCC  900
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGTCCATTCACTGTGAAAGGCTCTGAAGCAGTGAAAGCTGCCACAGTGCC  900

seq1  CAAGGTTAGCAGGGCTTGGGTTTAGCCTCTATGTGTCCTCCTTTCTGTGA  950
      ||| ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAA-GTTAGCA-GGCTTGGGTTTAGCCTCTATGTGTCCTCCTTTCTGTGA  948

seq1  CTGGTGTTCAAGACCCTGTCTAAACAGCATCCTGTGCTCTCTCTGACTTA  1000
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTTCAAGACCCTGTCTAAACAGCATCCTGTGCTCTCTCTGACTTA  998

seq1  CCCATTAGCAATGCACAACCTGTCAGAAGCACACGATCAACTAGCTGCTT  1050
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTAGC-ATGCACAACCTGTCAGAAGCACACGATCAACTAGCTGCTT  1047

seq1  TCCCTCCGCTATTGCAGAGATCAAATCTAGCACAATAAT-GGGGAGCGAA  1099
      ||| ||||||| ||||||||||||||||||||||||||| |||||| | |
seq2  TCCTTCCGCTAATGCAGAGATCAAATCTAGCACAATAATGGGGGAGGGGA  1097

seq1  GCACCT  1105
      ||||||
seq2  GCACCT  1103