BAC Information

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BAC

Clone NameB6Ng01-052C04
Chromosome15 (Build37)
Map Location 64,474,297 - 64,630,412
singlet/doubletdoublet
Overlap geneAdcy8
Upstream geneLOC672194, Mlze, AI987692, Gsdmdc2, 9930109F21Rik, LOC665769, 9030605I04Rik, 4933426G20Rik, 0910001A06Rik, Ddef1
Downstream geneLOC268812, LOC100040790, LOC665836, C920006C10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052C04.bB6Ng01-052C04.g
ACCDH875578DH875579
length6711,173
definitionDH875578|Mus musculus domesticus DNA, BAC clone: B6Ng01-052C04, 5' end.DH875579|Mus musculus domesticus DNA, BAC clone: B6Ng01-052C04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,629,742 - 64,630,412)(64,474,297 - 64,475,517)
sequence
gaattcagtaccatctcactcacgtcttttcataaaagtaaattaattaa
aatgggtttcaataatagtttctattacatagattgaaaagtggccccag
gtggctccttctgacaaaccctgggtctattctggggagccttattagct
gaggagatgccagagttgacactggactcctcttgctgcaatacttttat
taacaacctataaagggtgtccttgatgaatcctaatgaaatttgcagag
cagagtcttttcagtgcaattgctaaaaagctgcaggaatgactccagaa
tgccaagtaggaacagcctttttccagaagttatgtagagcaaaggtcct
aatcttgtggtagggttgctttgccaagcaagatggtaggacaaggacta
taaaacaggaatcatcatgtttctcgtcacttaagcaagagttccaaagc
ctgcctctccataccctttcctttctctttctctctccttccttcctcct
ctttctgctcccacaccttctccatcctctgacgtgctctttctgttctc
tacatccctatttctctgcctcttgtctctgtatctctgtctctctctcc
ccctccctccctccctctctccctctctccctctctccctctctccctcc
ctccctctccctatctccctc
gaattcatcatctggagtcctgagttctgtaagcttgaggacaaatttgc
tctgcctgtagctggagagcgaggctgaagagagaagagccaggaacaca
ctgtgtggtgcaggtccatggaacacatggtattcttctctgagtgttag
ttacagtttctctttaactaagtgcagcctggcaatgggaggcgaacatt
ccacgggacattctactgtgaggctgtgttgggggaggtggtactcactg
ctctacctgtcaacactgggaagagaatgctgtgagggtcctgcatctaa
gctgtagactcactgggataacagatggcaggagagaaggtttgtgaaaa
tgtcagtccttggggcaaagtcttcttgtggacggcgactctgcttgacg
agatttttgaagacaacttggatgtttctacatgcctcagtgagttcctg
tttccagcttcttccttccttttggatcctgcatttagtgattcccttca
tctgagagtgatataggcagcactattgcaaattgtcctgttgctctggg
gaacgctctgggaaaaagctctcacctcttttgtcatttacagctcattt
agcttagtcacaccttgcaagagaagactggctgccatgatgaggaaacc
caggatgccttaagaaagtgtttctctgaagtataatggcacaaaagttc
aaagaagccaggcaaaacccaatactgtgtatgctaatgtaaagattaat
taaaaatagatgatgttatcgtagtccactctccccataacatttgcatt
atttttgccttgtatccacatgttctgttctgctcctcaccagtggtttg
cctttataccaacacactgtcagatctaacctttttcataagaattatat
atttaaaactctagctttgagatctggaatacatattcatatcccaccca
cccacccaaagtgcacagaaaataagtaacagcttatgattttattgaaa
aaccaaacatatttcagatttaataaagacaaaatatttagcacccagag
taaagtagttatagtgaatagcttttaatttaatccccagaagatcttga
ctgaaggatcagaggtttaaagagcgattaaaagaactgtcaaatatagt
atcatcagagcagacacaccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_64629742_64630412
seq2: B6Ng01-052C04.b_41_711 (reverse)

seq1  GAGGGAGAGAGGAAGAGGGAGGGAGGGAGAGAGGGAGAGAGGGAGAGAGG  50
      |||||||| ||| |||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGATAGGGAGAGGGAGGGAGGGAGAGAGGGAGAGAGGGAGAGAGG  50

seq1  GAGAGAGGGAGGGAGGGAGGGGGAGAGAGAGACAGAGATACAGAGACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGGGAGGGAGGGAGGGGGAGAGAGAGACAGAGATACAGAGACAAG  100

seq1  AGGCAGAGAAATAGGGATGTAGAGAACAGAAAGAGCACGTCAGAGGATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGAAATAGGGATGTAGAGAACAGAAAGAGCACGTCAGAGGATGG  150

seq1  AGAAGGTGTGGGAGCAGAAAGAGGAGGAAGGAAGGAGAGAGAAAGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTGTGGGAGCAGAAAGAGGAGGAAGGAAGGAGAGAGAAAGAGAAA  200

seq1  GGAAAGGGTATGGAGAGGCAGGCTTTGGAACTCTTGCTTAAGTGACGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGGTATGGAGAGGCAGGCTTTGGAACTCTTGCTTAAGTGACGAGA  250

seq1  AACATGATGATTCCTGTTTTATAGTCCTTGTCCTACCATCTTGCTTGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATGATTCCTGTTTTATAGTCCTTGTCCTACCATCTTGCTTGGCA  300

seq1  AAGCAACCCTACCACAAGATTAGGACCTTTGCTCTACATAACTTCTGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACCCTACCACAAGATTAGGACCTTTGCTCTACATAACTTCTGGAA  350

seq1  AAAGGCTGTTCCTACTTGGCATTCTGGAGTCATTCCTGCAGCTTTTTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGTTCCTACTTGGCATTCTGGAGTCATTCCTGCAGCTTTTTAGC  400

seq1  AATTGCACTGAAAAGACTCTGCTCTGCAAATTTCATTAGGATTCATCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCACTGAAAAGACTCTGCTCTGCAAATTTCATTAGGATTCATCAAG  450

seq1  GACACCCTTTATAGGTTGTTAATAAAAGTATTGCAGCAAGAGGAGTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCCTTTATAGGTTGTTAATAAAAGTATTGCAGCAAGAGGAGTCCAG  500

seq1  TGTCAACTCTGGCATCTCCTCAGCTAATAAGGCTCCCCAGAATAGACCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAACTCTGGCATCTCCTCAGCTAATAAGGCTCCCCAGAATAGACCCA  550

seq1  GGGTTTGTCAGAAGGAGCCACCTGGGGCCACTTTTCAATCTATGTAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGTCAGAAGGAGCCACCTGGGGCCACTTTTCAATCTATGTAATAG  600

seq1  AAACTATTATTGAAACCCATTTTAATTAATTTACTTTTATGAAAAGACGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATTATTGAAACCCATTTTAATTAATTTACTTTTATGAAAAGACGT  650

seq1  GAGTGAGATGGTACTGAATTC  671
      |||||||||||||||||||||
seq2  GAGTGAGATGGTACTGAATTC  671

seq1: chr15_64474297_64475517
seq2: B6Ng01-052C04.g_67_1239

seq1  GAATTCATCATCTGGAGTCCTGAGTTCTGTAAGCTTGAGGACAAATTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATCTGGAGTCCTGAGTTCTGTAAGCTTGAGGACAAATTTGC  50

seq1  TCTGCCTGTAGCTGGAGAGCGAGGCTGAAGAGAGAAGAGCCAGGAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGTAGCTGGAGAGCGAGGCTGAAGAGAGAAGAGCCAGGAACACA  100

seq1  CTGTGTGGTGCAGGTCCATGGAACACATGGTATTCTTCTCTGAGTGTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGGTGCAGGTCCATGGAACACATGGTATTCTTCTCTGAGTGTTAG  150

seq1  TTACAGTTTCTCTTTAACTAAGTGCAGCCTGGCAATGGGAGGCGAACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTTCTCTTTAACTAAGTGCAGCCTGGCAATGGGAGGCGAACATT  200

seq1  CCACGGGACATTCTACTGTGAGGCTGTGTTGGGGGAGGTGGTACTCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGGGACATTCTACTGTGAGGCTGTGTTGGGGGAGGTGGTACTCACTG  250

seq1  CTCTACCTGTCAACACTGGGAAGAGAATGCTGTGAGGGTCCTGCATCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCTGTCAACACTGGGAAGAGAATGCTGTGAGGGTCCTGCATCTAA  300

seq1  GCTGTAGACTCACTGGGATAACAGATGGCAGGAGAGAAGGTTTGTGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGACTCACTGGGATAACAGATGGCAGGAGAGAAGGTTTGTGAAAA  350

seq1  TGTCAGTCCTTGGGGCAAAGTCTTCTTGTGGACGGCGACTCTGCTTGACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTCCTTGGGGCAAAGTCTTCTTGTGGACGGCGACTCTGCTTGACG  400

seq1  AGATTTTTGAAGACAACTTGGATGTTTCTACATGCCTCAGTGAGTTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTGAAGACAACTTGGATGTTTCTACATGCCTCAGTGAGTTCCTG  450

seq1  TTTCCAGCTTCTTCCTTCCTTTTGGATCCTGCATTTAGTGATTCCCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGCTTCTTCCTTCCTTTTGGATCCTGCATTTAGTGATTCCCTTCA  500

seq1  TCTGAGAGTGATATAGGCAGCACTATTGCAAATTGTCCTGTTGCTCTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAGTGATATAGGCAGCACTATTGCAAATTGTCCTGTTGCTCTGGG  550

seq1  GAACGCTCTGGGAAAAAGCTCTCACCTCTTTTGTCATTTACAGCTCATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGCTCTGGGAAAAAGCTCTCACCTCTTTTGTCATTTACAGCTCATTT  600

seq1  AGCTTAGTCACACCTTGCAAGAGAAGACTGGCTGCCATGATGAGGAAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGTCACACCTTGCAAGAGAAGACTGGCTGCCATGATGAGGAAACC  650

seq1  CAGGATGCCTTAAGAAAGTGTTTCTCTGAAGTATAATGGCACAAAAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGCCTTAAGAAAGTGTTTCTCTGAAGTATAATGGCACAAAAGTTC  700

seq1  AAAGAAGCCAGGCAAAACCCAATACTGTGTATGCTAATGTAAAGATTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGCCAGGCAAAACCCAATACTGTGTATGCTAATGTAAAGATTAAT  750

seq1  TAAAAATAGATGATGTTATCGTAGTCCACTCTCCCCATAACATTTGCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAGATGATGTTATCGTAGTCCACTCTCCCCATAACATTTGCATT  800

seq1  ATTTTTGCCTTGTATCCACATGTTCTGTTCTGCTCCTCACCAGTGGTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGCCTTGTATCCACATGTTCTGTTCTGCTCCTCACCAGTGGTTTG  850

seq1  CCTTTATACCAACACACTGTCAGATCTAACCTTTTTCATAAGAATTATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATACCAACACACTGTCAGATCTAACCTTTTTCATAAGAATTATAT  900

seq1  ATTTAAAACTCTAGCTTTGAAGATCTGGAAATACATATTCATATCCCACC  950
      ||||||||||||||||||| |||||||| |||||||||||||||||||||
seq2  ATTTAAAACTCTAGCTTTG-AGATCTGG-AATACATATTCATATCCCACC  948

seq1  CACCCACCCAAAGTGCACAGAAAAATAAGTAACAGCTTATGATTTTATTT  1000
      |||||||||||||||||||| |||||||||||||||||||||||||||| 
seq2  CACCCACCCAAAGTGCACAG-AAAATAAGTAACAGCTTATGATTTTATT-  996

seq1  AAAAAAACCAAACAATATTTCAGAATTTAATAAAGACAAAAATATTTTAG  1050
        ||||||||||| ||||||||| ||||||||||||| |||||| |||||
seq2  -GAAAAACCAAAC-ATATTTCAG-ATTTAATAAAGAC-AAAATA-TTTAG  1041

seq1  GCACACCCAGAGTAAAAGTAGTTATAAGTGAAATAGCTTTTAAAATTATA  1100
         |||||||||| ||||||||||| |||| ||||||||||||   | ||
seq2  ---CACCCAGAGT-AAAGTAGTTAT-AGTG-AATAGCTTTTAA---TTTA  1082

seq1  AAATTCACCAAGAAGAACCTATGAACATGAAGGGATCAAGGAAGGTTAAA  1150
      |   || || |||||| |   |||   |||| ||||||    ||||| ||
seq2  A---TC-CCCAGAAGATC--TTGA--CTGAA-GGATCA---GAGGTTTAA  1120

seq1  AAAAGAAGCTGATTAAAAAAGAGAAAACTGCAAAAATATATAGATATCAA  1200
      |     ||| |||||||      | |||||  ||   |||||| |||| |
seq2  A----GAGC-GATTAAA------AGAACTGTCAA---ATATAG-TATC-A  1154

seq1  TCAGAGCAAGACACACACACA  1221
      ||||||| |||||||| ||||
seq2  TCAGAGC-AGACACAC-CACA  1173