BAC Information

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BAC

Clone NameB6Ng01-053G20
Chromosome15 (Build37)
Map Location 61,239,501 - 61,283,346
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
Downstream geneMyc, Pvt1, LOC100040584, H2afy3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053G20.bB6Ng01-053G20.g
ACCDH876475DH876476
length1,1861,103
definitionDH876475|Mus musculus domesticus DNA, BAC clone: B6Ng01-053G20, 5' end.DH876476|Mus musculus domesticus DNA, BAC clone: B6Ng01-053G20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,282,143 - 61,283,346)(61,239,501 - 61,240,473)
sequence
gaattcagctgatgtacatgattcgctttgttctctggcacatgacaggg
aggtgttacattttcctgtctgagtatcccaactttctagaattagcctc
caaatctcaataatcctcaagaggaattattctttttttaagtgaattct
ttaatggcctatgtggtcatttgggatatttgagataactacccctataa
acaggattctcataatatctatgatgagatggcactttcagatttcaagg
aggaaggattagggcaccgctcccattgactggatggcttcgttttcaaa
attggtttattaacagataatctttatctcgactccttccgtagatgaga
atcttgggatcctgtgtattcatcattaaatatttgcacagataatttgg
cctgaagaacattttcactagagaactcaggttgtcttcttcaggctttc
tttatgtggttcctgggaattgctgattaacaaaatgagtttagtataga
cttaaaactgaatcccttgctttttaaatctatcacccaccccaatagaa
atactaaagaataaatacaatgtaggtctgttttttctagtacatggatg
attccttaattgaggtcttgcttgtagaaggaatcatttacatagtagat
tttctgtaataatttgttttcttttaggctggtgattttagtttcctcat
ctctgataagtaaaaaagtgagtccccattttgctcatgttacctggatg
agcgaaaggatatgtagactgatacatacattctacctgcaaaagaaaaa
aaaaacccattcaacataatttttagcctattttgtgagcagcttcatct
gttgtcatcagttgtgctggtaaacacttttacattcttgtaggggctaa
aaattcctgtatccaatggctcccatcacctagatatcttgtaacaataa
caccactgatttagtcataatcttaaattctagggaccactaaagcattg
taacccactagctaatagctgtgtaaatcccctctttatctggccccttt
tatgaccagcagcaaggcttgctttaatcattctcaactgaaacgacttt
agaaggctattcaattacattccccagatctttataggcggctcttcgtt
tacaaaggcagttctattgcccctctccagatagca
gaattcaagaagttagacttcagaaatccagaaaacactattaaaaatgg
ggtacagagataaacaaagaattctcaactgaggaatactgaatggctga
gaggcacctgaaaaaatgttcaacatccttagtcatcagggagatgcaaa
taaaaacaagtctgagattccacctctcaccagtcagaatgacagacctt
tttcagaagttctgtaattaaagggactcttttttcttctctcaccaaat
gcaaagcgaaagctccctcggaccttccctatcagaccttgttacagcta
caggacacagaactcacaaagtacacatcttacttttacttcatcttcta
aggtctttctctcaaacacgtctacagcccagcttctgtcacttcatcaa
ttctaaattcagcttcttctatgctggcaccagtttccatgggtgctgaa
gctcaaaggtctctgtttctgccatttgtgcctttctaccagttgtctcc
aatgtgagaagccataaccacattacggctttatcatgtggatttaaaaa
tgtgtgacaatattattttgttcatatcttgtgtaggtgggttgaagtgg
taacctctaagttgcatacatataaccagaaactacaagttcaccaatgt
tgtcttcaaaattctaataaaagaccttgtggcaagcacaactttcacag
gtatgaaaactgggattccaagaaatgtagcgataggcacttaattacta
aatacagatccacagttcaatcagtctaacttaaggcagtgctcttgaac
attagaaaaactgaccttcttttcacactttagaagtctaaagggcccat
aaatagggttgaagtaaagactattatttgatttttctagaaagaaggct
atgggaaggaatgcttagatagagattgtgaacttcatgaagaagtttaa
aaccactaccgagacatcaagagatgtatcatctcttcctggaaatagtt
catcatctctgagggcccaccctaaagacacaggtaactctctgtacagg
cttctttacagcaattgcacttcttgttctctgtaagccatatggagtcc
ttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_61282143_61283346
seq2: B6Ng01-053G20.b_44_1229 (reverse)

seq1  TGCTAATCTGGAAGGGGGCAAATTAGGAACTGCCTTTGTAAAACGGAGAG  50
      |||| |||||||  |||||||  || ||||||||||||| ||||| ||||
seq2  TGCT-ATCTGGAGAGGGGCAA--TA-GAACTGCCTTTGT-AAACGAAGAG  45

seq1  CAGGCCTTATAAAGAATCTGGGGTATGTGTATGTGATAGCACTTCTATAA  100
      | |  | ||||||| |||||||| ||||  ||   ||||| |||||| ||
seq2  CCG--CCTATAAAG-ATCTGGGGAATGT-AATTGAATAGC-CTTCTA-AA  89

seq1  GGTTCTGTTCAGTTGAG-ATGATTTAAAAGCAAGCCTTGGCTGGCTGGTC  149
      |  ||  |||||||||| ||||||  |||||||||||| ||| |||||||
seq2  G--TCGTTTCAGTTGAGAATGATT--AAAGCAAGCCTT-GCT-GCTGGTC  133

seq1  ATAAAAGGGGCCAGATTATAGAGGGGATTTACACAGCTATTAGCTAGTGG  199
      ||||||||||||||| || |||||||||||||||||||||||||||||||
seq2  ATAAAAGGGGCCAGA-TAAAGAGGGGATTTACACAGCTATTAGCTAGTGG  182

seq1  GTTACAATGCTTTAGTGGTCCCTAGATATTTAAGATTAATGACTAAATCA  249
      |||||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  GTTACAATGCTTTAGTGGTCCCTAGA-ATTTAAGATT-ATGACTAAATCA  230

seq1  GTGGTGTTATTGTTACAAGATATCTAGGTGATGGGAGCCATTGGATACAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTTATTGTTACAAGATATCTAGGTGATGGGAGCCATTGGATACAG  280

seq1  GAATTTTTAGCCCCTACAAGAATGTAAAAGTGTTTACCAGCAC-ACTGAT  348
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAATTTTTAGCCCCTACAAGAATGTAAAAGTGTTTACCAGCACAACTGAT  330

seq1  GACAACAGATTGAAGCTGCTCACAAAATAGGCTAAAAATTATGTTGAATG  398
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACAACAGA-TGAAGCTGCTCACAAAATAGGCTAAAAATTATGTTGAATG  379

seq1  GGTTTTTTTTTTCTTTTGCAGGTAGAATGTATGTATCAGTCTACATATCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTTTTCTTTTGCAGGTAGAATGTATGTATCAGTCTACATATCC  429

seq1  TTTCGCTCATCCAGGTAACATGAGCAAAATGGGGACTCACTTTTTTACTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGCTCATCCAGGTAACATGAGCAAAATGGGGACTCACTTTTTTACTT  479

seq1  ATCAGAGATGAGG-AACTAAAATCACCAGCCTAAAAGAAAACAAATTATT  547
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGATGAGGAAACTAAAATCACCAGCCTAAAAGAAAACAAATTATT  529

seq1  ACAGAAAATCTACTATGTAAATGATTCCTTCTACAAGCAAGACCTCAATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAATCTACTATGTAAATGATTCCTTCTACAAGCAAGACCTCAATT  579

seq1  AAGGAATCATCCATGTACTAGAAAAAACAGACCTACATTGTATTTATTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATCATCCATGTACTAGAAAAAACAGACCTACATTGTATTTATTCT  629

seq1  TTAGTATTTCTATTGGGGTGGGTGATAGATTTAAAAAGCAAGGGATTCAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATTTCTATTGGGGTGGGTGATAGATTTAAAAAGCAAGGGATTCAG  679

seq1  TTTTAAGTCTATACTAAACTCATTTTGTTAATCAGCAATTCCCAGGAACC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTCTATACTAAACTCATTTTGTTAATCAGCAATTCCCAGGAACC  729

seq1  ACATAAAGAAAGCCTGAAGAAGACAACCTGAGTTCTCTAGTGAAAATGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGAAAGCCTGAAGAAGACAACCTGAGTTCTCTAGTGAAAATGTT  779

seq1  CTTCAGGCCAAATTATCTGTGCAAATATTTAATGATGAATACACAGGATC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGCCAAATTATCTGTGCAAATATTTAATGATGAATACACAGGATC  829

seq1  CCAAGATTCTCATCTACGGAAGGAGTCGAGATAAAGATTATCTGTTAATA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATTCTCATCTACGGAAGGAGTCGAGATAAAGATTATCTGTTAATA  879

seq1  AACCAATTTTGAAAACGAAGCCATCCAGTCAATGGGAGCGGTGCCCTAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATTTTGAAAACGAAGCCATCCAGTCAATGGGAGCGGTGCCCTAAT  929

seq1  CCTTCCTCCTTGAAATCTGAAAGTGCCATCTCATCATAGATATTATGAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTCCTTGAAATCTGAAAGTGCCATCTCATCATAGATATTATGAGA  979

seq1  ATCCTGTTTATAGGGGTAGTTATCTCAAATATCCCAAATGACCACATAGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTTTATAGGGGTAGTTATCTCAAATATCCCAAATGACCACATAGG  1029

seq1  CCATTAAAGAATTCACTTAAAAAAAGAATAATTCCTCTTGAGGATTATTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAAAGAATTCACTTAAAAAAAGAATAATTCCTCTTGAGGATTATTG  1079

seq1  AGATTTGGAGGCTAATTCTAGAAAGTTGGGATACTCAGACAGGAAAATGT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGGAGGCTAATTCTAGAAAGTTGGGATACTCAGACAGGAAAATGT  1129

seq1  AACACCTCCCTGTCATGTGCCAGAGAACAAAGCGAATCATGTACATCAGC  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTCCCTGTCATGTGCCAGAGAACAAAGCGAATCATGTACATCAGC  1179

seq1  TGAATTC  1204
      |||||||
seq2  TGAATTC  1186

seq1: chr15_61239501_61240473
seq2: B6Ng01-053G20.g_213_1172

seq1  ATGCAAATAAAAACAAGTCTGAGATTCCACCTCTCACCAGTCAGAATGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATAAAAACAAGTCTGAGATTCCACCTCTCACCAGTCAGAATGAC  50

seq1  AGACCTTTTTCAGAAGTTCTGTAATTAAAGGGACTCTTTTTTCTTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTTTTCAGAAGTTCTGTAATTAAAGGGACTCTTTTTTCTTCTCTC  100

seq1  ACCAAATGCAAAGCGAAAGCTCCCTCGGACCTTCCCTATCAGACCTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATGCAAAGCGAAAGCTCCCTCGGACCTTCCCTATCAGACCTTGTT  150

seq1  ACAGCTACAGGACACAGAACTCACAAAGTACACATCTTACTTTTACTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTACAGGACACAGAACTCACAAAGTACACATCTTACTTTTACTTCA  200

seq1  TCTTCTAAGGTCTTTCTCTCAAACACGTCTACAGCCCAGCTTCTGTCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAAGGTCTTTCTCTCAAACACGTCTACAGCCCAGCTTCTGTCACT  250

seq1  TCATCAATTCTAAATTCAGCTTCTTCTATGCTGGCACCAGTTTCCATGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAATTCTAAATTCAGCTTCTTCTATGCTGGCACCAGTTTCCATGGG  300

seq1  TGCTGAAGCTCAAAGGTCTCTGTTTCTGCCATTTGTGCCTTTCTACCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAGCTCAAAGGTCTCTGTTTCTGCCATTTGTGCCTTTCTACCAGT  350

seq1  TGTCTCCAATGTGAGAAGCCATAACCACATTACGGCTTTATCATGTGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCAATGTGAGAAGCCATAACCACATTACGGCTTTATCATGTGGAT  400

seq1  TTAAAAATGTGTGACAATATTATTTTGTTCATATCTTGTGTAGGTGGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATGTGTGACAATATTATTTTGTTCATATCTTGTGTAGGTGGGTT  450

seq1  GAAGTGGTAACCTCTAAGTTGCATACATATAACCAGAAACTACAAGTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGTAACCTCTAAGTTGCATACATATAACCAGAAACTACAAGTTCA  500

seq1  CCAATGTTGTCTTCAAAATTCTAATAAAAGACCTTGTGGCAAGCACAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTTGTCTTCAAAATTCTAATAAAAGACCTTGTGGCAAGCACAACT  550

seq1  TTCACAGGTATGAAAACTGGGATTCCAAGAAATGTAGCGATAGGCACTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGGTATGAAAACTGGGATTCCAAGAAATGTAGCGATAGGCACTTA  600

seq1  ATTACTAAATACAGATCCACAGTTCAATCAGTCTAACTTAAGGCAGTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAAATACAGATCCACAGTTCAATCAGTCTAACTTAAGGCAGTGCT  650

seq1  CTTGAACATTAGAAAAACTGACCTTCTTTTCACACTTTAGAAGTCTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACATTAGAAAAACTGACCTTCTTTTCACACTTTAGAAGTCTAAAG  700

seq1  GGCCCATAAATAGGGTTGAAGTAAAGACTATTAATTGATTTTTCTAGAAG  750
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  GGCCCATAAATAGGGTTGAAGTAAAGACTATTATTTGATTTTTCTAGAAA  750

seq1  GAAGGCTATGGGAAGGAATGCTTAGATAGAAGATTGTGAACTTCATGAAG  800
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAAGGCTATGGGAAGGAATGCTTAGATAG-AGATTGTGAACTTCATGAAG  799

seq1  AAGTTTAAAACCACTACCGAGACATCAAAGAGATGTATCATCTCTTCCTG  850
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAGTTTAAAACCACTACCGAGACATC-AAGAGATGTATCATCTCTTCCTG  848

seq1  GAAATAGTTCATCATCTTCTGAGGGCCCCACCCTAAAGACCACAGGTAAC  900
      |||||||||||||||| |||||||| ||||||||||||| ||||||||||
seq2  GAAATAGTTCATCATC-TCTGAGGG-CCCACCCTAAAGA-CACAGGTAAC  895

seq1  TTCCTCCTGTACAGGCTTCTTTACAAGCAATTTGCCACTTCTTGTTCTCC  950
      |  || |||||||||||||||||| |||||||   ||||||||||||| |
seq2  T--CT-CTGTACAGGCTTCTTTAC-AGCAATT--GCACTTCTTGTTCT-C  938

seq1  TGTAGGCCATAATGGAGTTCTTT  973
      |||| ||||| ||||||| ||||
seq2  TGTAAGCCAT-ATGGAGTCCTTT  960