BAC Information

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BAC

Clone NameB6Ng01-053P24
Chromosome15 (Build37)
Map Location 18,893,544 - 18,894,673
singlet/doubletsinglet
Overlap geneCdh10
Upstream geneLOC666835, LOC666839
Downstream geneEG666857, EG666875, LOC621884, LOC100040265
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053P24.bB6Ng01-053P24.g
ACCDH876875DH876876
length1,0461,148
definitionDH876875|Mus musculus domesticus DNA, BAC clone: B6Ng01-053P24, 5' end.DH876876|Mus musculus domesticus DNA, BAC clone: B6Ng01-053P24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattgaatattagtccc
ctatctgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgactgtgttttttgctttgtagaagctttacaatttta
tgaggtcccatttatcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtaccatatcttcgaggcttttccctact
ttctcctctataagtttcagtgtcactggttttatgtggagttccttaat
ccacttagatttgaccttagtacaaggagatagaaatggatcaattcgca
ttcttgtacatgataatcgccagttgtgccagcatcatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtggatccatctctgggtcttcaattctgttccattggt
ctacttgtctatcactatactagtaccatgcagttttgatcacaattgct
ctgtagtacagtttaaggtccggcatggtgattccaccaaaggttctttt
atccttgagaagagtttttgctatcctaggtttttttttttttccatttt
ttattaggtatttcgctcatttacatttgcaatgctataccaaaagtccc
ccatagccacccaccccctctcccctacccacccactcccttttatggcc
ctggcgttcccctgtactggggcatataaagtttgcgtgtccaatgggcc
tctctttccagtgatggccgactaggccattttttgagcatatgcaccta
gagtcaaaagctccggggtactggttagtcataatgtggttccacctata
gggttgcagattcctttagcttctttgtacttttctctagctccttcatg
gggggccatgtggatccattcaataagccgactggggagctatcac
gaattcacaatgctatatgaagctacatgatcttgctggtccttgggtat
gataggagctactctgttctgattcacagccctgagattactgaccctgt
tatttgtgatgggacttgaagggccatctttgagtacttttaatcctgtg
catctttagtcatcatcatggatatgttcatttttatttcctccagcttc
attcagaccaagataaaggagatggatcgctcaaatatattttgtctgga
gacggagctggtactctttttattattgatgagaaaacaggtgatattca
tgccacaagaagaattgatagagaagaaaaggccttttatactctacgtg
cacaagctattaacagaagaactctgaggccagtagaaccagagtcagaa
tttgtgatcaaaatccatgatatcaatgacaatgagcctacattcccaga
agaaatttatacagccagtgttcctgaaatgtctgttgtaggtaagtgca
gttagaacatttgtgatgtatgaaaaccataaaagttatttcaaattatt
cttgcaatattgtgtttaattaacttaaatcactttttttattccccacc
caaaaaatgcatatatattttcgtaaggaagcaatgagtaaaaacagaaa
tattattgcattttacatgacttgtggatttgcagatttcacagcacatt
aagtagacttgtccagtaatccagaaaatacctctaaatttcagtagaaa
tgacaaaaatgaaacttattatattaacttttacaactaccctgtgtgac
cctaaagccaaatatcttataattataattgtcttctgctttccacgatg
gaccagatactgggtcccttacagaatctgaatattcagtaatataagta
gcatagtatatgcacatgactggtgcataccctcctatacttctttaaaa
attttgtttgaattcctccaatggaaaactgcaggtaggagattcttaag
agggcatcagttagaagcttatagattcattagactggttacagaagagt
accagggggtaaagaaaatggtttcccttgtgaatgctagtcaccaggtt
tatcagagagattttatttagaattataaacatatttccagtaaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_18893544_18894673
seq2: B6Ng01-053P24.g_70_1217

seq1  GAATTCACAATGCTATATGAAGCTACATGATCTTGCTGGTCCTTGGGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAATGCTATATGAAGCTACATGATCTTGCTGGTCCTTGGGTAT  50

seq1  GATAGGAGCTACTCTGTTCTGATTCACAGCCCTGAGATTACTGACCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGAGCTACTCTGTTCTGATTCACAGCCCTGAGATTACTGACCCTGT  100

seq1  TATTTGTGATGGGACTTGAAGGGCCATCTTTGAGTACTTTTAATCCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTGATGGGACTTGAAGGGCCATCTTTGAGTACTTTTAATCCTGTG  150

seq1  CATCTTTAGTCATCATCATGGATATGTTCATTTTTATTTCCTCCAGCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTAGTCATCATCATGGATATGTTCATTTTTATTTCCTCCAGCTTC  200

seq1  ATTCAGACCAAGATAAAGGAGATGGATCGCTCAAATATATTTTGTCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGACCAAGATAAAGGAGATGGATCGCTCAAATATATTTTGTCTGGA  250

seq1  GACGGAGCTGGTACTCTTTTTATTATTGATGAGAAAACAGGTGATATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGAGCTGGTACTCTTTTTATTATTGATGAGAAAACAGGTGATATTCA  300

seq1  TGCCACAAGAAGAATTGATAGAGAAGAAAAGGCCTTTTATACTCTACGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAAGAAGAATTGATAGAGAAGAAAAGGCCTTTTATACTCTACGTG  350

seq1  CACAAGCTATTAACAGAAGAACTCTGAGGCCAGTAGAACCAGAGTCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCTATTAACAGAAGAACTCTGAGGCCAGTAGAACCAGAGTCAGAA  400

seq1  TTTGTGATCAAAATCCATGATATCAATGACAATGAGCCTACATTCCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGATCAAAATCCATGATATCAATGACAATGAGCCTACATTCCCAGA  450

seq1  AGAAATTTATACAGCCAGTGTTCCTGAAATGTCTGTTGTAGGTAAGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTATACAGCCAGTGTTCCTGAAATGTCTGTTGTAGGTAAGTGCA  500

seq1  GTTAGAACATTTGTGATGTATGAAAACCATAAAAGTTATTTCAAATTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAACATTTGTGATGTATGAAAACCATAAAAGTTATTTCAAATTATT  550

seq1  CTTGCAATATTGTGTTTAATTAACTTAAATCACTTTTTTTATTCCCCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAATATTGTGTTTAATTAACTTAAATCACTTTTTTTATTCCCCACC  600

seq1  CAAAAAATGCATATATATTTTCGTAAGGAAGCAATGAGTAAAAACAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATGCATATATATTTTCGTAAGGAAGCAATGAGTAAAAACAGAAA  650

seq1  TATTATTGCATTTTACATGACTTGTGGATTTGCAGATTTCACAGCACATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTGCATTTTACATGACTTGTGGATTTGCAGATTTCACAGCACATT  700

seq1  AAGTAGACTTGTCCAGTAATCCAGAAAATACCTCTAAATTTCAGTAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGACTTGTCCAGTAATCCAGAAAATACCTCTAAATTTCAGTAGAAA  750

seq1  TGACAAAAATGAAACTTATTATATTAACTTTTACAACTACCCTGTGTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAAATGAAACTTATTATATTAACTTTTACAACTACCCTGTGTGAC  800

seq1  CCTAAAGCCAAATATCTTATAATTATAATTGTCTTCTGCTTTCCACGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAGCCAAATATCTTATAATTATAATTGTCTTCTGCTTTCCACGATG  850

seq1  GACCAGATACTGGGTCCCTTACAGAATCTGAATATTCAGTAATATAAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGATACTGGGTCCCTTACAGAATCTGAATATTCAGTAATATAAGTA  900

seq1  GCATAGTATATGCACATGACTGGTGCATACCCTCCTATACTTCTTTAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGTATATGCACATGACTGGTGCATACCCTCCTATACTTCTTTAAAA  950

seq1  ATTTTGTTTGAATT-CTCCAATGGAAAACTGCAGGTA-GAGATCCTTAAG  998
      |||||||||||||| |||||||||||||||||||||| ||||| ||||||
seq2  ATTTTGTTTGAATTCCTCCAATGGAAAACTGCAGGTAGGAGATTCTTAAG  1000

seq1  A--GCATCAGTTAG-AGC-TATAGA-TCA-TAGACTGG-TACAG-AGAGT  1040
      |  ||||||||||| ||| |||||| ||| |||||||| ||||| |||||
seq2  AGGGCATCAGTTAGAAGCTTATAGATTCATTAGACTGGTTACAGAAGAGT  1050

seq1  ACCA-GGGGTAA--GAAATGGTTTCACTTGTGAATGCTAGTCAC--AGTT  1085
      |||| |||||||   |||||||||| ||||||||||||||||||   |||
seq2  ACCAGGGGGTAAAGAAAATGGTTTCCCTTGTGAATGCTAGTCACCAGGTT  1100

seq1  TATCAGA-AGATTTTATTTAG-ATTATTAACATA-TTCCAGTAAAAGT  1130
      ||||||| ||||||||||||| ||||| |||||| |||||||||||||
seq2  TATCAGAGAGATTTTATTTAGAATTATAAACATATTTCCAGTAAAAGT  1148