BAC Information

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BAC

Clone NameB6Ng01-055K07
Chromosome15 (Build37)
Map Location 46,056,311 - 46,057,323
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039389, EG432951
Downstream geneLOC100039438
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055K07.bB6Ng01-055K07.g
ACCDH878031DH878032
length9271,017
definitionDH878031|Mus musculus domesticus DNA, BAC clone: B6Ng01-055K07, 5' end.DH878032|Mus musculus domesticus DNA, BAC clone: B6Ng01-055K07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagaagatgatgatacagtattcccaaatttatgtgacacagt
gaaagcagtgataaaaggaaaattcatagcactaattgacatggtaaaga
agttggagagatcctacaatagcaacttaacagcacacctgagagctcta
gaacaaaaagaagcagatacaccaaagaggagtagactgcaggaaacagt
taaactcagggctgaaatcagccacatcgaaacacagaactatacaaaaa
caatcaataaaaccaaaaattggtttgtttgtttttgttttgttttgggg
tttttttttgagaaaataaataagataaataaacccctggagaaactaac
taaagggcacagaaacaatatccaaattaataaaatcagaattgaaaagg
gaaacacaacaaatgaaactgaggaaattaaaaaacaagtcttcatattc
tactactaaagtctatactcaacaaaatggtaaaatcaagttgaaagcaa
tgattctctagacagataccatgttccaagctagtaaaaagcaggtaatg
catctaacctggcctatatgtcctagtgaaatacaagaattcattaacct
caccctaccccccaaaaagcccacatccagatgactttattgcagaaatc
tacaacaccttcaaaaaagaactaatagcaacaattctcaaactattcca
taaatagagatagaagaaccactactgaattcattctagaagccacagtt
actttgatatctaaaccacaaaagggtgcaacaaaaaataacttcagacc
aattttgtttatgaatctctctctctctctctctctctctctctctctct
ctctctatatatatatatatattttatatatatacacatgtttatattgg
atatatatatgatgtataaatatgcac
gaattcataaaaacagaagagaggtagcaggagacaggctcatgtcataa
aaactaagaagtcacttctcaaaccaaaattggaagcagaggaaaaaaaa
aaaaaaaaaaaaaaaagagatcctgagaggcttttggaaacctcaaattt
acccttagtgaaacaccactcccacaatatcattcctactcatccttctt
aaacatttccatctacttgggatcaagtattcaaatgcccaatattcttg
acaaatatctcattgtaaacaacattgttggttcagatggaagcacactt
gaaatttttcaaaaaaattaaaatagaaaaaataaaacttagagtagaaa
acattttattgaaaaaggaaagaaaagaaaatattttattatacaagcaa
tctatatcaatatagagcaaaacatcttaagattaaaatatgctaaatat
tcactaaatgtttcattttaatgtctattaagttgtttcttctctcaagg
tccattgacgaagtgtgaggaaaattccttttattttttaattttttaaa
tctggaatatattacaaccttattacagttatgcctccctccacttttct
cagttccactgctcccagctctatcccaaaattccaccccttctcagttt
accttcaggaaagagtgggccaactgagttatcatatggacctgacataa
cagtaaaataagactaggcacaaatcctcatttaaaagttagatgaggaa
aaccggtaggaagaaagggatctcaaaagcatacaaaaatcatgcacaaa
cacatttatctctgtgaggagtcctttaaggataccaagttgacaacata
ttttttatgcagatgaactaactgaggacaaaaactgggcttcatgagtt
ttctttaggcaattgggaccttttaggtgtcctgaataattaattctgtg
gggatgagttctcatggtgtccattgctggagatggacctctggtcgggt
cctcgatccaaaggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_46056311_46057323
seq2: B6Ng01-055K07.g_64_1080

seq1  GAATTCATAAAAACAGAAGAGAGGTAGCAGGAGACAGGCTCATGTCATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAAAACAGAAGAGAGGTAGCAGGAGACAGGCTCATGTCATAA  50

seq1  AAACTAAGAAGTCACTTCTCAAACCAAAATTGGAAGCAGAGGAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAGAAGTCACTTCTCAAACCAAAATTGGAAGCAGAGGAAAAAAAA  100

seq1  AAAAAAAAAAAAAAAAGAGATCCTGAGAGGCTTTTGGAAACCTCAAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAGAGATCCTGAGAGGCTTTTGGAAACCTCAAATTT  150

seq1  ACCCTTAGTGAAACACCACTCCCACAATATCATTCCTACTCATCCTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTAGTGAAACACCACTCCCACAATATCATTCCTACTCATCCTTCTT  200

seq1  AAACATTTCCATCTACTTGGGATCAAGTATTCAAATGCCCAATATTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTCCATCTACTTGGGATCAAGTATTCAAATGCCCAATATTCTTG  250

seq1  ACAAATATCTCATTGTAAACAACATTGTTGGTTCAGATGGAAGCACACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATCTCATTGTAAACAACATTGTTGGTTCAGATGGAAGCACACTT  300

seq1  GAAATTTTTCAAAAAAATTAAAATAGAAAAAATAAAACTTAGAGTAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTTTCAAAAAAATTAAAATAGAAAAAATAAAACTTAGAGTAGAAA  350

seq1  ACATTTTATTGAAAAAGGAAAGAAAAGAAAATATTTTATTATACAAGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTATTGAAAAAGGAAAGAAAAGAAAATATTTTATTATACAAGCAA  400

seq1  TCTATATCAATATAGAGCAAAACATCTTAAGATTAAAATATGCTAAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATCAATATAGAGCAAAACATCTTAAGATTAAAATATGCTAAATAT  450

seq1  TCACTAAATGTTTCATTTTAATGTCTATTAAGTTGTTTCTTCTCTCAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAAATGTTTCATTTTAATGTCTATTAAGTTGTTTCTTCTCTCAAGG  500

seq1  TCCATTGACGAAGTGTGAGGAAAATTCCTTTTATTTTTTAATTTTTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGACGAAGTGTGAGGAAAATTCCTTTTATTTTTTAATTTTTTAAA  550

seq1  TCTGGAATATATTACAACCTTATTACAGTTATGCCTCCCTCCACTTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATATATTACAACCTTATTACAGTTATGCCTCCCTCCACTTTTCT  600

seq1  CAGTTCCACTGCTCCCAGCTCTATCCCAAAATTCCACCCCTTCTCAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCACTGCTCCCAGCTCTATCCCAAAATTCCACCCCTTCTCAGTTT  650

seq1  ACCTTCAGGAAAGAGTGGGCCAACTGAGTTATCATATGGACCTGACATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAGGAAAGAGTGGGCCAACTGAGTTATCATATGGACCTGACATAA  700

seq1  CAGTAAAATAAGACTAGGCACAAATCCTCATTTAAAAGTTAGATGAGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAATAAGACTAGGCACAAATCCTCATTTAAAAGTTAGATGAGGAA  750

seq1  AACCGGTAGGAAGAAAGGGATCTCAAAAGCATACAAAAATCATGCACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGGTAGGAAGAAAGGGATCTCAAAAGCATACAAAAATCATGCACAAA  800

seq1  CACA-TTATCTCTGTGAGGAGTCCCTTAAGGATACCAAGTTGACAAACAT  849
      |||| ||||||||||||||||||| ||||||||||||||||||| |||||
seq2  CACATTTATCTCTGTGAGGAGTCCTTTAAGGATACCAAGTTGAC-AACAT  849

seq1  AATATTTATGCAGATGAACTAACTGA-GACAAAAACT-GGCTTCATGAGT  897
      | | |||||||||||||||||||||| |||||||||| ||||||||||||
seq2  ATTTTTTATGCAGATGAACTAACTGAGGACAAAAACTGGGCTTCATGAGT  899

seq1  ATTTCTTTAGGCAA-TGGGACCTTTTATGTGTCCTGATTAATTAATTCTG  946
       ||||||||||||| |||||||||||| ||||||||| ||||||||||||
seq2  -TTTCTTTAGGCAATTGGGACCTTTTAGGTGTCCTGAATAATTAATTCTG  948

seq1  T-GGGATGAGTTCTCATGGTGTCCATTGCTGCAGATGGACCTCT-GTCGG  994
      | ||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  TGGGGATGAGTTCTCATGGTGTCCATTGCTGGAGATGGACCTCTGGTCGG  998

seq1  GTCCTCGATCCACAGGAAA  1013
      |||||||||||| ||||||
seq2  GTCCTCGATCCAAAGGAAA  1017