BAC Information

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BAC

Clone NameB6Ng01-055P13
Chromosome15 (Build37)
Map Location 54,710,042 - 54,860,661
singlet/doubletdoublet
Overlap geneEnpp2, LOC100039911, LOC100039822, Taf2
Upstream geneSamd12, EG665097, EG621631, Tnfrsf11b, LOC665280, EG383032, Colec10, Mal2, Nov, LOC665302, LOC100039816
Downstream gene2600005O03Rik, Depdc6, Col14a1, Mrpl13, Mtbp, Sntb1, LOC665348, LOC100039908
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055P13.bB6Ng01-055P13.g
ACCDH878274DH878275
length7991,118
definitionDH878274|Mus musculus domesticus DNA, BAC clone: B6Ng01-055P13, 5' end.DH878275|Mus musculus domesticus DNA, BAC clone: B6Ng01-055P13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(54,859,863 - 54,860,661)(54,710,042 - 54,711,204)
sequence
gaattctcttattaccttttggatagaagaattaagattgcaagatggtt
ttggaaaaaactgaatccgatcaggaagctggacctctggatagaatgaa
ccttacataagaagttgcttgatgtttaattttcaaagacttgtcagaat
cagaatcatatacgttacaaaataatgtacagttatcttctgtcagcagc
ctgctagtttacgtttgccctttacaatgcacgtgagtgaaagaaagaat
gacttttgcacgctgtcctctggcttccacactcaaagcacagcatctga
gcacaagcgcagtgttcaacacacacatgcacactcactcaatatttttt
taatttctgaagtagattttgtaagaatagtggtgtgagcacgcctttaa
tcccagcacttgggaggcagaggcaggtggatttctgagtttgaggccag
cctggtctacagagtgagttccaggacagccagggctatacagagaaacc
ctgtctaaaagaatagtggtgtgtggtaattaatgatgttggttttgtct
gcctcttaggcactgcacatgactggaggttacggtgtggtgctgtggac
ttgtacttcacgctgtttggcctcagcagaccgtcttgcttacccttgcc
agagctcggtgcttgttcttaacctaaaatagaagaaagctgtcttgaat
cctactattattccagaagctggtagtaggcaccaggagtctgcgagtta
cccaggctgccacgctcagctagctggattccaaaccctgtgagtgtcc
gaattcatacacatcaggacttttggcaggaaagaggactatgtgtttag
aaatcctcttgaaaagaccgcactcagactcttgctgtgggaagctggcc
ccctttctgaggcaacaacggttccataagtattgtctggaaatccggag
agtagcaacctctaaccgtcaagtgaaggagagaccccagtgctaggaaa
accagcccctgatttgctaatggtgcaaaggtgaattaaagcagcaggcc
ttgctgtctacctagctaccttatttcttggcaagactgttccaagagcc
actgggatgcaggcagggcaggaagaagaacggtgttagtgtaaccaagg
gggacatctgccatgctgttgctcttttcgcagggcaagcagctgcacga
gcatttctggttctatctcatcctctctctcctgcagagcgatcagaagt
cacagccctgtagactttggtttggtttgctttggttttaatgcttctag
tttaggcacgtctccatgagaagagcaggaaaaaggaagagggtttttcc
atgtcatggtcactgagtacattctgcgagcgctcgaatactgcccatca
aactctaagccatttgcaagaaactccaacattccaaagacgcccaaaga
gaaccgttccaattgcagcaggttagaagagcagaagaaagggagtgtaa
gcagatggagtttttatccaatcattacaaaggcatgtttctccttcttc
ggatgttaggggtagatggaaagctgttttcactgtccagccatacttca
gcctgaatttagaagttttagtctgaggttattcagagaatgggagaggg
gcggggtgcaaatttctctgcctttcagaggattctttaccatctgaagg
tagggaccagccagccaaagctctgctctaggcccagagagcagccgaca
catgtcacagagaaagcatagatcaaagagaccataaaaaaaaaaggatg
tgccatattccaagcagcatatttggaactcacattactatggaagcagg
acaattcccatttctcaacgttagccggtttggccattcagtaagcttgg
actccctgaaacagtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_54859863_54860661
seq2: B6Ng01-055P13.b_50_848 (reverse)

seq1  GGACACTCACAGGGTTCTGGAATCCAGCTAGCTGAGCGTGGCAGCCTGGG  50
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGACACTCACAGGGTT-TGGAATCCAGCTAGCTGAGCGTGGCAGCCTGGG  49

seq1  TTACTCGCAGACTCCTGGTTGCCTACT-CCAGCTTCTGGAATAATGGTAG  99
      | |||||||||||||||| |||||||| ||||||||||||||||| ||||
seq2  TAACTCGCAGACTCCTGG-TGCCTACTACCAGCTTCTGGAATAATAGTAG  98

seq1  GATTCAAGACAGCTTTCTTCTCTTTTAGGTTAAGAACAAGC-CCGAGCTC  148
      ||||||||||||||||||||| ||||||||||||||||||| ||||||||
seq2  GATTCAAGACAGCTTTCTTCTATTTTAGGTTAAGAACAAGCACCGAGCTC  148

seq1  TGGCAAGGGTAAGCAAGACGGTCTGCTGAGGCCAAACAGCGTGAAGTACA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGGGTAAGCAAGACGGTCTGCTGAGGCCAAACAGCGTGAAGTACA  198

seq1  AGTCCACAGCACCACACCGTAACCTCCAGTCATGTGCAGTGCCTAAGAGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCACAGCACCACACCGTAACCTCCAGTCATGTGCAGTGCCTAAGAGG  248

seq1  CAGACAAAACCAACATCATTAATTACCACACACCACTATTCTTTTAGACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAAACCAACATCATTAATTACCACACACCACTATTCTTTTAGACA  298

seq1  GGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAG  348

seq1  GCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGG  398

seq1  ATTAAAGGCGTGCTCACACCACTATTCTTACAAAATCTACTTCAGAAATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGCGTGCTCACACCACTATTCTTACAAAATCTACTTCAGAAATT  448

seq1  AAAAAAATATTGAGTGAGTGTGCATGTGTGTGTTGAACACTGCGCTTGTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATATTGAGTGAGTGTGCATGTGTGTGTTGAACACTGCGCTTGTG  498

seq1  CTCAGATGCTGTGCTTTGAGTGTGGAAGCCAGAGGACAGCGTGCAAAAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATGCTGTGCTTTGAGTGTGGAAGCCAGAGGACAGCGTGCAAAAGT  548

seq1  CATTCTTTCTTTCACTCACGTGCATTGTAAAGGGCAAACGTAAACTAGCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTCTTTCACTCACGTGCATTGTAAAGGGCAAACGTAAACTAGCA  598

seq1  GGCTGCTGACAGAAGATAACTGTACATTATTTTGTAACGTATATGATTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTGACAGAAGATAACTGTACATTATTTTGTAACGTATATGATTCT  648

seq1  GATTCTGACAAGTCTTTGAAAATTAAACATCAAGCAACTTCTTATGTAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGACAAGTCTTTGAAAATTAAACATCAAGCAACTTCTTATGTAAG  698

seq1  GTTCATTCTATCCAGAGGTCCAGCTTCCTGATCGGATTCAGTTTTTTCCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTCTATCCAGAGGTCCAGCTTCCTGATCGGATTCAGTTTTTTCCA  748

seq1  AAACCATCTTGCAATCTTAATTCTTCTATCCAAAAGGTAATAAGAGAATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATCTTGCAATCTTAATTCTTCTATCCAAAAGGTAATAAGAGAATT  798

seq1  C  799
      |
seq2  C  799

seq1: chr15_54710042_54711204
seq2: B6Ng01-055P13.g_68_1185

seq1  GAATTCATACACATCAGGACTTTTGGCAGGAAAGAGGACTATGTGTTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACACATCAGGACTTTTGGCAGGAAAGAGGACTATGTGTTTAG  50

seq1  AAATCCTCTTGAAAAGACCGCACTCAGACTCTTGCTGTGGGAAGCTGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTCTTGAAAAGACCGCACTCAGACTCTTGCTGTGGGAAGCTGGCC  100

seq1  CCCTTTCTGAGGCAACAACGGTTCCATAAGTATTGTCTGGAAATCCGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTGAGGCAACAACGGTTCCATAAGTATTGTCTGGAAATCCGGAG  150

seq1  AGTAGCAACCTCTAACCGTCAAGTGAAGGAGAGACCCCAGTGCTAGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCAACCTCTAACCGTCAAGTGAAGGAGAGACCCCAGTGCTAGGAAA  200

seq1  ACCAGCCCCTGATTTGCTAATGGTGCAAAGGTGAATTAAAGCAGCAGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCCCCTGATTTGCTAATGGTGCAAAGGTGAATTAAAGCAGCAGGCC  250

seq1  TTGCTGTCTACCTAGCTACCTTATTTCTTGGCAAGACTGTTCCAAGAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTCTACCTAGCTACCTTATTTCTTGGCAAGACTGTTCCAAGAGCC  300

seq1  ACTGGGATGCAGGCAGGGCAGGAAGAAGAACGGTGTTAGTGTAACCAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGATGCAGGCAGGGCAGGAAGAAGAACGGTGTTAGTGTAACCAAGG  350

seq1  GGGACATCTGCCATGCTGTTGCTCTTTTCGCAGGGCAAGCAGCTGCACGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATCTGCCATGCTGTTGCTCTTTTCGCAGGGCAAGCAGCTGCACGA  400

seq1  GCATTTCTGGTTCTATCTCATCCTCTCTCTCCTGCAGAGCGATCAGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCTGGTTCTATCTCATCCTCTCTCTCCTGCAGAGCGATCAGAAGT  450

seq1  CACAGCCCTGTAGACTTTGGTTTGGTTTGCTTTGGTTTTAATGCTTCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCCTGTAGACTTTGGTTTGGTTTGCTTTGGTTTTAATGCTTCTAG  500

seq1  TTTAGGCACGTCTCCATGAGAAGAGCAGGAAAAAGGAAGAGGGTTTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCACGTCTCCATGAGAAGAGCAGGAAAAAGGAAGAGGGTTTTTCC  550

seq1  ATGTCATGGTCACTGAGTACATTCTGCGAGCGCTCGAATACTGCCCATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATGGTCACTGAGTACATTCTGCGAGCGCTCGAATACTGCCCATCA  600

seq1  AACTCTAAGCCATTTGCAAGAAACTCCAACATTCCAAAGACGCCCAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAAGCCATTTGCAAGAAACTCCAACATTCCAAAGACGCCCAAAGA  650

seq1  GAACCGTTCCAATTGCAGCAGGTTAGAAGAGCAGAAGAAAGGGAGTGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCGTTCCAATTGCAGCAGGTTAGAAGAGCAGAAGAAAGGGAGTGTAA  700

seq1  GCAGATGGAGTTTTTATCCAATCATTACAAAGGCATGTTTCTCCTTCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGGAGTTTTTATCCAATCATTACAAAGGCATGTTTCTCCTTCTTC  750

seq1  GGATGTTAGGGGTAGATGGAAAGCTGTTTTCACTGTCCAGCCATACTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTAGGGGTAGATGGAAAGCTGTTTTCACTGTCCAGCCATACTTCA  800

seq1  GCCTGAATTTAGAAGTTTTAGCCTGAGGTTATTCAGAGAATGGGAGAGGG  850
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCCTGAATTTAGAAGTTTTAGTCTGAGGTTATTCAGAGAATGGGAGAGGG  850

seq1  GCGGGGTGCAAATTTCCCTGCCTTTCAGAAGGATTCTTTACCATCTGAAG  900
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  GCGGGGTGCAAATTTCTCTGCCTTTCAG-AGGATTCTTTACCATCTGAAG  899

seq1  GTAGGGACCAGCCAGCCAAAGCTCTGCCTCTAGGCCCAGAAGAGCAGCCG  950
      |||||||||||||||||||||||||| |||||||||||| ||||||||||
seq2  GTAGGGACCAGCCAGCCAAAGCTCTG-CTCTAGGCCCAG-AGAGCAGCCG  947

seq1  AACAACATGTCACAGAGAAAGCATAGATCAAAGAGACCAAAAAAAAAAAA  1000
      |   ||||||||||||||||||||||||||||||||||            
seq2  A--CACATGTCACAGAGAAAGCATAGATCAAAGAGACC------------  983

seq1  AAAAAAAAAAAAGATTGTGCCAATATTCCAAAGCAAGCATATTTTGAACA  1050
      | |||||||||||  |||||| ||||||| |||| ||||||||| |||| 
seq2  ATAAAAAAAAAAGGATGTGCC-ATATTCC-AAGC-AGCATATTTGGAAC-  1029

seq1  TTCACCATTACACTATGAAAGCAGGAGCAATACACCATTTCTCCAAACTG  1100
       ||| ||||  |||||| |||||||| |||| | |||||||||  ||| |
seq2  -TCA-CATT--ACTATGGAAGCAGGA-CAATTC-CCATTTCTC--AAC-G  1070

seq1  TTAGCCCCGTGTTTGGCCATCTCAGTAAATAGCTTTTGAGACTCACCCTG  1150
      ||||||    |||||||||| ||||||   |||||    ||||  |||||
seq2  TTAGCC---GGTTTGGCCAT-TCAGTA---AGCTT---GGACT--CCCTG  1108

seq1  AAAAACAAGTGTA  1163
      |||    ||||||
seq2  AAA---CAGTGTA  1118