BAC Information

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BAC

Clone NameB6Ng01-056K23
Chromosome15 (Build37)
Map Location 101,616,927 - 101,618,045
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc4a8, Scn8a, EG668225, Ankrd33, Acvrl1, Acvr1b, Grasp, Nr4a1, 9430023L20Rik, 6030408B16Rik, Krt80, Krt7, Krt85, Krt83, 1700011A15Rik, 5430421N21Rik, EG574415, Krt84, Krt82, 4732456N10Rik, Krt75, EG432985, EG432986, EG406223, EG432987, Krt6b, Krt6a, Krt5, Krt71, Krt74, Krt72
Downstream geneKrt73, Krt2, LOC100043001, Krt1, Krt77, Krt76, Krt4, Krt79, Krt78, Krt8, Krt18, LOC676882, Eif4b, Tenc1, Spryd3, Igfbp6, Soat2, Csad, Zfp740, Itgb7, Rarg, D15Mgi27, Espl1, Pfdn5, Myg1, Aaas, Sp7, Sp1, Amhr2, Prr13, Pcbp2, Map3k12, Tarbp2, Npff, Atf7, LOC100043600, Atp5g2, Calcoco1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056K23.bB6Ng01-056K23.g
ACCDH878766DH878767
length1,112305
definitionDH878766|Mus musculus domesticus DNA, BAC clone: B6Ng01-056K23, 5' end.DH878767|Mus musculus domesticus DNA, BAC clone: B6Ng01-056K23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgattcatccagcaatggagccctcagggggcgataagaaaag
atcattgttacctgttctctacctggggacgaggagacctggcccaagag
gacagagacgtctctgtgccttggtttttaggaaaaagtgactgcaaagg
ttacttttataagccaacgttccataaggattatcagctattaacagctt
tcttaattttcctgttcttaatggctagcatcaattaactcttgttcttg
ttgtgaggaaaacacgggttaaaaattgagtgggtgggactgaaataata
tattgctaaaagcacagcctggagtttcttaagggcctgttgaccccacc
cctacccccagcagcacagagagcccacttcttccccatagggacacctc
aggctcctctatctgttcatctcttcctggcgccgccatcttcgccactc
ccaatacccacatcacactgtccaatgtgggcaaacggcttagctgttat
tatgccctctgatgggctcactggaagccatgtcagtagcccccagggac
tgccccaaggtaaggactaagctccaatgtaaggaagagccctgtctgag
gcacttgtgtctttcaaagtcatccccaacataccaaggcttgttctgca
tgccgggagtacgggagagaagagttaatctgggctaggctgtcaatcat
atggggaatttctggagcagagccaacctagacatctcccctaggcccct
acaagccagacccactggaattttctactgatgatcttggtagtgatgac
ctacataattggagggaagcctatggagataaggttgtgaaattattata
atgcaggagacgagcacgggaaattcggggttctgggccattttatagaa
gttcgtgacaggtgaagtggagagacagaaatctttgcaagtgaacggta
atttcctaatgaaggaccgaagagatcgtccccccactccaccccaatga
cccaaaaggggttccaacatacaaattagctgactccatcctgcagccca
agccagactattaagggcgagcttcgccagaagtgcagctggtattccgg
gcccaggcctgc
attgaaggagctagagaaagtacccaaggatctgaaggtgtttgcatccc
cataggaggaaaaacaatatgaactaaccagtacccccagagttccctgg
cactaaaccatcagtcaaagaaaacaaatggtgggactcatggctctagc
tgcatctatagcagaggatagcctagtcagtcatcaatgagaggacaggc
ccttggtcctgtgaaagttctgtgccacagtataggggaatggcaggacc
aggaattgggagtggatgggtcgatgaacgggggaggggcaggggatagg
ggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_101616927_101618045
seq2: B6Ng01-056K23.b_48_1159 (reverse)

seq1  GCAGGCCTGGGGCACGGATA-CAGCTGCACTCCTGGCGCAGCTCGCCCCT  49
      ||||||||||| |  | ||| |||||||||| |||||| |||||||||  
seq2  GCAGGCCTGGGCCCGGAATACCAGCTGCACTTCTGGCGAAGCTCGCCC--  48

seq1  TAAATAGTCCTGCTTGGGCTGGCAGGATGGAGTCAGCTAATTTGTATGTT  99
      | |||||||  ||||||||| |||||||||||||||||||||||||||||
seq2  TTAATAGTCTGGCTTGGGCT-GCAGGATGGAGTCAGCTAATTTGTATGTT  97

seq1  GGAAACCCCTTTTGGGTCATTGGGGTGGAGTGGGGGGACGATCTCTTCGG  149
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GG-AACCCCTTTTGGGTCATTGGGGTGGAGTGGGGGGACGATCTCTTCGG  146

seq1  TCCTTCATTTAGGAAATTACCGTTCACTTGCAAAGATTTCTGTCTCTTCC  199
      ||||||| |||||||||||||||||||||||||||||||||||||| |||
seq2  TCCTTCA-TTAGGAAATTACCGTTCACTTGCAAAGATTTCTGTCTC-TCC  194

seq1  ACTTCACCTGTCCACGAACCTTCTATAAAATGGCCCAGAACCCCGAATTT  249
      ||||||||||| |||||| |||||||||||||||||||||||||||||||
seq2  ACTTCACCTGT-CACGAA-CTTCTATAAAATGGCCCAGAACCCCGAATTT  242

seq1  CCCGTGCTCGTCTCCTGCATTATAATAATTTCACAACCTTATCTCCATAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGCTCGTCTCCTGCATTATAATAATTTCACAACCTTATCTCCATAG  292

seq1  GCTTCCCTCCAATTATGTAGGTCATCACTACCAAGATCATCAGTAGAAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCTCCAATTATGTAGGTCATCACTACCAAGATCATCAGTAGAAAA  342

seq1  TTCCAGTGGGTCTGGCTTGTAGGGGCCTAGGGGAGATGTCTAGGTTGGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTGGGTCTGGCTTGTAGGGGCCTAGGGGAGATGTCTAGGTTGGCT  392

seq1  CTGCTCCAGAAATTCCCCATATGATTGACAGCCTAGCCCAGATTAACTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCAGAAATTCCCCATATGATTGACAGCCTAGCCCAGATTAACTCT  442

seq1  TCTCTCCCGTACTCCCGGCATGCAGAACAAGCCTTGGTATGTTGGGGATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCGTACTCCCGGCATGCAGAACAAGCCTTGGTATGTTGGGGATG  492

seq1  ACTTTGAAAGACACAAGTGCCTCAGACAGGGCTCTTCCTTACATTGGAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAAAGACACAAGTGCCTCAGACAGGGCTCTTCCTTACATTGGAGC  542

seq1  TTAGTCCTTACCTTGGGGCAGTCCCTGGGGGCTACTGACATGGCTTCCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCTTACCTTGGGGCAGTCCCTGGGGGCTACTGACATGGCTTCCAG  592

seq1  TGAGCCCATCAGAGGGCATAATAACAGCTAAGCCGTTTGCCCACATTGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCATCAGAGGGCATAATAACAGCTAAGCCGTTTGCCCACATTGGA  642

seq1  CAGTGTGATGTGGGTATTGGGAGTGGCGAAGATGGCGGCGCCAGGAAGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGATGTGGGTATTGGGAGTGGCGAAGATGGCGGCGCCAGGAAGAG  692

seq1  ATGAACAGATAGAGGAGCCTGAGGTGTCCCTATGGGGAAGAAGTGGGCTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAGATAGAGGAGCCTGAGGTGTCCCTATGGGGAAGAAGTGGGCTC  742

seq1  TCTGTGCTGCTGGGGGTAGGGGTGGGGTCAACAGGCCCTTAAGAAACTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCTGCTGGGGGTAGGGGTGGGGTCAACAGGCCCTTAAGAAACTCC  792

seq1  AGGCTGTGCTTTTAGCAATATATTATTTCAGTCCCACCCACTCAATTTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTGCTTTTAGCAATATATTATTTCAGTCCCACCCACTCAATTTTT  842

seq1  AACCCGTGTTTTCCTCACAACAAGAACAAGAGTTAATTGATGCTAGCCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGTGTTTTCCTCACAACAAGAACAAGAGTTAATTGATGCTAGCCAT  892

seq1  TAAGAACAGGAAAATTAAGAAAGCTGTTAATAGCTGATAATCCTTATGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACAGGAAAATTAAGAAAGCTGTTAATAGCTGATAATCCTTATGGA  942

seq1  ACGTTGGCTTATAAAAGTAACCTTTGCAGTCACTTTTTCCTAAAAACCAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGGCTTATAAAAGTAACCTTTGCAGTCACTTTTTCCTAAAAACCAA  992

seq1  GGCACAGAGACGTCTCTGTCCTCTTGGGCCAGGTCTCCTCGTCCCCAGGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGAGACGTCTCTGTCCTCTTGGGCCAGGTCTCCTCGTCCCCAGGT  1042

seq1  AGAGAACAGGTAACAATGATCTTTTCTTATCGCCCCCTGAGGGCTCCATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACAGGTAACAATGATCTTTTCTTATCGCCCCCTGAGGGCTCCATT  1092

seq1  GCTGGATGAATCAGGAATTC  1119
      ||||||||||||||||||||
seq2  GCTGGATGAATCAGGAATTC  1112