BAC Information

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BAC

Clone NameB6Ng01-056N12
Chromosome15 (Build37)
Map Location 73,192,612 - 73,290,522
singlet/doubletdoublet
Overlap genePtk2, LOC666053, LOC100040929
Upstream geneKcnk9, 1810044A24Rik, LOC665621, Peg13, LOC100041120, Chrac1, Eif2c2
Downstream geneDennd3, Slc45a4, Gpr20, LOC100040946, pPtp4a3, Gm628, LOC100041273, EG625276, LOC100040966, EG666113, LOC100041307, LOC100040984
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056N12.bB6Ng01-056N12.g
ACCDH878882DH878883
length1,213899
definitionDH878882|Mus musculus domesticus DNA, BAC clone: B6Ng01-056N12, 5' end.DH878883|Mus musculus domesticus DNA, BAC clone: B6Ng01-056N12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,192,612 - 73,193,822)(73,289,624 - 73,290,522)
sequence
gaattctctctacaacctctcactaacttagtttattcactgtccaaata
tttccacctcctaatgtgtaagtttttaaggggtggaaaagccaggtatg
aaagatgactactttctacagttactcagaaagcaaatgactaaaggtat
gcctagtactcactgtaactgaggcagtaacaaaaacctgagaacccatt
ggcccgctgaggatcacggggtcagatgacagctggaaagagggggagag
gaggtacattaccagcaatcaaaaggattacaataactttttctaaaaat
tgtagttatagttaggcatagtgcataaacctttattcccaatactgaag
aggcagaggtaggaggatctgtaagttcaagaccagcctgatctacatag
aaatcctgtctcaacaaacaaaaacctatagttataatcaaaacaataca
ataccccttagtctatgacacaatcccagacaggattctgatgattcaga
gaggtcaagcattttaaaagaacagatgtagatcataatgaaacctaaaa
gaaaacattaagaagtcctctgttctctatcttgtgaaatatacagggcc
agcattcattaaaaattctgtgctgctccaattaatgtttactattagca
taatgaaatgcaactctggtaaattctcctttacaagtaaacccattata
ttaaaatttacaagaaagagacagtactgtttgtagaacaccaaaatcct
tcatccctagtcactgctgccttcttgcttcaaagggatctgtcagaaac
ctttatcaataccttcagaacacagccagtgtctatgcacttctcactga
ctactgcccacattctaattcaagctcctgctatagcctgcttcctcaga
ttctatcctaaaactagcagctgctgaaagagcaagcatatcattcattc
ctctatttggatcttggtcacacttctccagatacacaccaaaaatactt
agcagaatatgcaagcctacaccttcatctcacagtttatctatctgttg
gtttcatagcaccacactgttactgactttcctggcgtgctctttggcac
atctcagcacctcctgtatacctgcctcctccctcgcatgggaatggcct
tgcctcacgctttccaggcacatgccctttcctacttaactatacctact
caatatgttcttg
gaattctttgccttacaaaaacatccaatatgtaaagcagataagagctg
aactgcttccattgaagctggggtctaaggggacccagaaataggaccag
aaccctatttactccatagttgtacatactagagagacaggtggggtgag
tagcaaaatggagggagcttaggcagctggcaagggtttctgcagtggag
gaactgagtgctagggcaaggcccttagggcagtgctggccagcaagact
ggttgactcatctctcacagcaagatgtcagtgtgtacaaacaccaggac
acctccttacgaaagttctgatgacttcatcctgcccatgtctcgagctt
tctttcttggacttaaaaggatattttgggggaaactttcatatagaaga
agtactaagactggagaaatgactcagtaggtaagagaacttgctgctct
tgcagaggctctgagttttgaccccagtaacaacgggcagctcacaactg
aatgacacataaactcacacagacataaattaaaaataaacaggtaaaca
aaccttttttaagaaagaaagaaacaaagaaagaaaaaagagagagagag
aaagaaagaaggaaagaaagaaagaaagaaagaaagaaagaaagaaagaa
agaaagaaagagagaaagaaatatcttatggtaatccagccttcccatta
ctgatcttttctttccccctttgttacactcacataggtgccggctatgg
tggcaaatgcctttaattccagcactcagagatcaggcaggcagatctct
gagttcgaggccagcctgggtttacaaagtgagtccaggatatccaggac
tcttacacagagaaaccctgggtttgtttgtttgggtgggtgttttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_73192612_73193822
seq2: B6Ng01-056N12.b_48_1260

seq1  GAATTCTCTCTACAACCTCTCACTAACTTAGTTTATTCACTGTCCAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTACAACCTCTCACTAACTTAGTTTATTCACTGTCCAAATA  50

seq1  TTTCCACCTCCTAATGTGTAAGTTTTTAAGGGGTGGAAAAGCCAGGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACCTCCTAATGTGTAAGTTTTTAAGGGGTGGAAAAGCCAGGTATG  100

seq1  AAAGATGACTACTTTCTACAGTTACTCAGAAAGCAAATGACTAAAGGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGACTACTTTCTACAGTTACTCAGAAAGCAAATGACTAAAGGTAT  150

seq1  GCCTAGTACTCACTGTAACTGAGGCAGTAACAAAAACCTGAGAACCCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGTACTCACTGTAACTGAGGCAGTAACAAAAACCTGAGAACCCATT  200

seq1  GGCCCGCTGAGGATCACGGGGTCAGATGACAGCTGGAAAGAGGGGGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGCTGAGGATCACGGGGTCAGATGACAGCTGGAAAGAGGGGGAGAG  250

seq1  GAGGTACATTACCAGCAATCAAAAGGATTACAATAACTTTTTCTAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTACATTACCAGCAATCAAAAGGATTACAATAACTTTTTCTAAAAAT  300

seq1  TGTAGTTATAGTTAGGCATAGTGCATAAACCTTTATTCCCAATACTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTATAGTTAGGCATAGTGCATAAACCTTTATTCCCAATACTGAAG  350

seq1  AGGCAGAGGTAGGAGGATCTGTAAGTTCAAGACCAGCCTGATCTACATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGGTAGGAGGATCTGTAAGTTCAAGACCAGCCTGATCTACATAG  400

seq1  AAATCCTGTCTCAACAAACAAAAACCTATAGTTATAATCAAAACAATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGTCTCAACAAACAAAAACCTATAGTTATAATCAAAACAATACA  450

seq1  ATACCCCTTAGTCTATGACACAATCCCAGACAGGATTCTGATGATTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCCTTAGTCTATGACACAATCCCAGACAGGATTCTGATGATTCAGA  500

seq1  GAGGTCAAGCATTTTAAAAGAACAGATGTAGATCATAATGAAACCTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAAGCATTTTAAAAGAACAGATGTAGATCATAATGAAACCTAAAA  550

seq1  GAAAACATTAAGAAGTCCTCTGTTCTCTATCTTGTGAAATATACAGGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACATTAAGAAGTCCTCTGTTCTCTATCTTGTGAAATATACAGGGCC  600

seq1  AGCATTCATTAAAAATTCTGTGCTGCTCCAATTAATGTTTACTATTAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCATTAAAAATTCTGTGCTGCTCCAATTAATGTTTACTATTAGCA  650

seq1  TAATGAAATGCAACTCTGGTAAATTCTCCTTTACAAGTAAACCCATTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAATGCAACTCTGGTAAATTCTCCTTTACAAGTAAACCCATTATA  700

seq1  TTAAAATTTACAAGAAAGAGACAGTACTGTTTGTAGAACACCAAAATCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTTACAAGAAAGAGACAGTACTGTTTGTAGAACACCAAAATCCT  750

seq1  TCATCCCTAGTCACTGCTGCCTTCTTGCTTCAAAGGGATCTGTCAGAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCTAGTCACTGCTGCCTTCTTGCTTCAAAGGGATCTGTCAGAAAC  800

seq1  CTTTATCAATACCTTCAGAACACAGCCAGTGTCTATGCACTTCTCACTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCAATACCTTCAGAACACAGCCAGTGTCTATGCACTTCTCACTGA  850

seq1  CTACTGCCCACATTCTAATTCAAGCTCCTGCTATAGCCTGCTTCCTCAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCCCACATTCTAATTCAAGCTCCTGCTATAGCCTGCTTCCTCAGA  900

seq1  TTCTATCCTAAAACTAGCAGCTGCTGAAAGAGCAAGCATATCATTCATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCCTAAAACTAGCAGCTGCTGAAAGAGCAAGCATATCATTCATTC  950

seq1  CTCTATTTGAATCTTGGTCAACACTTCCCCAAGATACACACC-AAAATAC  999
      ||||||||| ||||||||| ||||||| || ||||||||||| |||||||
seq2  CTCTATTTGGATCTTGGTC-ACACTTCTCC-AGATACACACCAAAAATAC  998

seq1  TTAGCAGAATATGCAAAGCCTACACCTTCATCTCACAG-TTATCTATCTG  1048
      |||||||||||||| ||||||||||||||||||||||| |||||||||||
seq2  TTAGCAGAATATGC-AAGCCTACACCTTCATCTCACAGTTTATCTATCTG  1047

seq1  TTGGTTTCCATAGCACCAACCACTG-TACTGACTTCCCTG--CTGCTCTT  1095
      ||||||| ||||||||||  ||||| ||||||||| ||||   |||||||
seq2  TTGGTTT-CATAGCACCA--CACTGTTACTGACTTTCCTGGCGTGCTCTT  1094

seq1  T-GCACATCTCAGCACCT-CTGTACTACCTGCCT-CTCCTCCACAT-GGA  1141
      | |||||||||||||||| ||||| ||||||||| ||||  | ||| |||
seq2  TGGCACATCTCAGCACCTCCTGTA-TACCTGCCTCCTCCCTCGCATGGGA  1143

seq1  ATGGCCTTGCCTCA-GCTTTCACAGC-CATGCCCTTTCCCTACTTAACTA  1189
      |||||||||||||| ||||||   || |||||||||| ||||||||||||
seq2  ATGGCCTTGCCTCACGCTTTCCAGGCACATGCCCTTT-CCTACTTAACTA  1192

seq1  TCACCTACTCAATATGTCCTTG  1211
      | ||||||||||||||| ||||
seq2  T-ACCTACTCAATATGTTCTTG  1213

seq1: chr15_73289624_73290522
seq2: B6Ng01-056N12.g_66_964 (reverse)

seq1  AACAAAACAACCAACCAAACAAACAAAACCCAGGGTTTCTCTGTGTAAGA  50
      ||||||||| ||| |||||||||| |||||||||||||||||||||||||
seq2  AACAAAACACCCACCCAAACAAAC-AAACCCAGGGTTTCTCTGTGTAAGA  49

seq1  GTCCTGGATATCCTGGACTCACTTTGTAAA-CCAGGCTGGCCTCGAACTC  99
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTCCTGGATATCCTGGACTCACTTTGTAAACCCAGGCTGGCCTCGAACTC  99

seq1  AGAGATCTGCCTGCCTGATCTCTGAGTGCTGGAATTAAAGGCATTTGCCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCTGCCTGCCTGATCTCTGAGTGCTGGAATTAAAGGCATTTGCCA  149

seq1  CCATAGCCGGCACCTTATGTGAGTGTAAC-AAGGGGGAAAGAAAAGATCA  198
      |||||||||||||| |||||||||||||| ||||||||||||||||||||
seq2  CCATAGCCGGCACC-TATGTGAGTGTAACAAAGGGGGAAAGAAAAGATCA  198

seq1  GTAATGGGAAGGCTGGATTACCATAAGATATTTCTTTCTCTCTTTCTTTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGGGAAGGCTGGATTACCATAAGATATTTCTTTCTCTCTTTCTTTC  248

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTT  298

seq1  TCTCTCTCTCTCTTTTTTCTTTCTTTGTTTCTTTCTTTCTTAAAAAAGGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTTTTTTCTTTCTTTGTTTCTTTCTTTCTTAAAAAAGGT  348

seq1  TTGTTTACCTGTTTATTTTTAATTTATGTCTGTGTGAGTTTATGTGTCAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTACCTGTTTATTTTTAATTTATGTCTGTGTGAGTTTATGTGTCAT  398

seq1  TCAGTTGTGAGCTGCCCGTTGTTACTGGGGTCAAAACTCAGAGCCTCTGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGTGAGCTGCCCGTTGTTACTGGGGTCAAAACTCAGAGCCTCTGC  448

seq1  AAGAGCAGCAAGTTCTCTTACCTACTGAGTCATTTCTCCAGTCTTAGTAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGCAAGTTCTCTTACCTACTGAGTCATTTCTCCAGTCTTAGTAC  498

seq1  TTCTTCTATATGAAAGTTTCCCCCAAAATATCCTTTTAAGTCCAAGAAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTATATGAAAGTTTCCCCCAAAATATCCTTTTAAGTCCAAGAAAG  548

seq1  AAAGCTCGAGACATGGGCAGGATGAAGTCATCAGAACTTTCGTAAGGAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCGAGACATGGGCAGGATGAAGTCATCAGAACTTTCGTAAGGAGG  598

seq1  TGTCCTGGTGTTTGTACACACTGACATCTTGCTGTGAGAGATGAGTCAAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGTGTTTGTACACACTGACATCTTGCTGTGAGAGATGAGTCAAC  648

seq1  CAGTCTTGCTGGCCAGCACTGCCCTAAGGGCCTTGCCCTAGCACTCAGTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTGCTGGCCAGCACTGCCCTAAGGGCCTTGCCCTAGCACTCAGTT  698

seq1  CCTCCACTGCAGAAACCCTTGCCAGCTGCCTAAGCTCCCTCCATTTTGCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACTGCAGAAACCCTTGCCAGCTGCCTAAGCTCCCTCCATTTTGCT  748

seq1  ACTCACCCCACCTGTCTCTCTAGTATGTACAACTATGGAGTAAATAGGGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCCCACCTGTCTCTCTAGTATGTACAACTATGGAGTAAATAGGGT  798

seq1  TCTGGTCCTATTTCTGGGTCCCCTTAGACCCCAGCTTCAATGGAAGCAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCCTATTTCTGGGTCCCCTTAGACCCCAGCTTCAATGGAAGCAGT  848

seq1  TCAGCTCTTATCTGCTTTACATATTGGATGTTTTTGTAAGGCAAAGAATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCTTATCTGCTTTACATATTGGATGTTTTTGTAAGGCAAAGAATT  898

seq1  C  899
      |
seq2  C  899