BAC Information

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BAC

Clone NameB6Ng01-056P14
Chromosome15 (Build37)
Map Location 87,667,797 - 87,824,085
singlet/doubletdoublet
Overlap geneLOC100042329
Upstream geneLOC100042309, AW049604
Downstream geneLOC100042340, Zdhhc25, Brd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056P14.bB6Ng01-056P14.g
ACCDH878977DH878978
length804582
definitionDH878977|Mus musculus domesticus DNA, BAC clone: B6Ng01-056P14, 5' end.DH878978|Mus musculus domesticus DNA, BAC clone: B6Ng01-056P14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,667,797 - 87,668,599)(87,823,504 - 87,824,085)
sequence
gaattctgttctctgggcatgacttggtcttttgttttctagaaaaatca
aagcaactatatcaactgcatgagaccctcaggagatcggacctataaat
gtaccttcccaagagttggatggtcctaatccccttacctgaaattccag
gcacaagctccctccagccatctctcctggagtgttagggtatacaggag
atggaagacaccaatgatgcagttttcctgagtcatcacccattctggag
tgtgactcttaggtgaagtcattaacttcaatgcccatgttcctggatgg
aacgcctgactcacattcctccacatcactccaataaactcactgtttca
catgctggacctggatggaatcatttacatagcatttttgttgttgttgt
tctctctggggtgaaacagactccccaggaaatgttaagcaacagatgtg
gtcaggcctctcatgaccagggcacttgagaaagacggatgcttcgggct
ctggagggactgcttgtcaccagaacacatgggggagggtttacagagga
tcagctctgtgacactaatgaaggccaagtgattaggacaccatccatct
caatgtaacagtcattagagccacgattaccataaccgctataagctcgt
gatttatggagattgtaatgattattttttgtaatactaagttagaggat
tttttggcagtagatcaatttggagaaaattgaaatacagtttttgagtg
aggaatgtcactgaatcacaaaaactgtcaggtgtgtgtgtgtgtgtgtg
tgtg
gaattcaaggtgtggtggggctaacacagaacccaagtttgctcagtgaa
attccatttctgacctggtgggaactatgtcgtctttgtaattgagttca
gaatacctgggagggtgcagaggtgtggacaaccaagctgtctcatctgt
ttcctaggttagaatgatgctcaaagtcctccaaactcatttacctcgtg
gtcccccatgctatagacattattgttaccccacagtcacattcctcctg
agtgctctaccagggcacccaggacacacctaccttcgctgtcacctgtt
tagggggcatcatctttccattttcagaccataggtccatccaggagaga
gaagaactggatgcgatgctcagccattctctctgcccctccctgcctca
gctgctgtgggaaatctcagtgctgaggccgcagaatagggtaggctcca
tcaatgtgatctttctgaaattccagtgatagcaatggaaagcaatgaat
tgtaaggccaaagaaggaaatgtcccagatgaggggtccaatcaataata
agaaaaatcctgaaaacatttggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_87667797_87668599
seq2: B6Ng01-056P14.b_45_848

seq1  GAATTCTGTTCTCTGGGCATGACTTGGTCTTTTGTTTTCTAGAAAAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCTCTGGGCATGACTTGGTCTTTTGTTTTCTAGAAAAATCA  50

seq1  AAGCAACTATATCAACTGCATGAGACCCTCAGGAGATCGGACCTATAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACTATATCAACTGCATGAGACCCTCAGGAGATCGGACCTATAAAT  100

seq1  GTACCTTCCCAAGAGTTGGATGGTCCTAATCCCCTTACCTGAAATTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTTCCCAAGAGTTGGATGGTCCTAATCCCCTTACCTGAAATTCCAG  150

seq1  GCACAAGCTCCCTCCAGCCATCTCTCCTGGAGTGTTAGGGTATACAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAGCTCCCTCCAGCCATCTCTCCTGGAGTGTTAGGGTATACAGGAG  200

seq1  ATGGAAGACACCAATGATGCAGTTTTCCTGAGTCATCACCCATTCTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGACACCAATGATGCAGTTTTCCTGAGTCATCACCCATTCTGGAG  250

seq1  TGTGACTCTTAGGTGAAGTCATTAACTTCAATGCCCATGTTCCTGGATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTCTTAGGTGAAGTCATTAACTTCAATGCCCATGTTCCTGGATGG  300

seq1  AACGCCTGACTCACATTCCTCCACATCACTCCAATAAACTCACTGTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCCTGACTCACATTCCTCCACATCACTCCAATAAACTCACTGTTTCA  350

seq1  CATGCTGGACCTGGATGGAATCATTTACATAGCATTTTTGTTGTTGTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGGACCTGGATGGAATCATTTACATAGCATTTTTGTTGTTGTTGT  400

seq1  TCTCTCTGGGGTGAAACAGACTCCCCAGGAAATGTTAAGCAACAGATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGGGGTGAAACAGACTCCCCAGGAAATGTTAAGCAACAGATGTG  450

seq1  GTCAGGCCTCTCATGACCAGGGCACTTGAGAAAGACGGATGCTTCGGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCCTCTCATGACCAGGGCACTTGAGAAAGACGGATGCTTCGGGCT  500

seq1  CTGGAGGGACTGCTTGTCACCAGAACACATGGGGGAGGGTTTACAGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGGACTGCTTGTCACCAGAACACATGGGGGAGGGTTTACAGAGGA  550

seq1  TCAGCTCTGTGACACTAATGAAGGCCAAGTGATTAGGACACCATCCATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCTGTGACACTAATGAAGGCCAAGTGATTAGGACACCATCCATCT  600

seq1  CAATGTAACAGTCATTAGAGCCACGATTACCATAACCGCTATAAGCTCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTAACAGTCATTAGAGCCACGATTACCATAACCGCTATAAGCTCGT  650

seq1  GATTTATGGAGATTGTAATGATTA-TTTTTGTAATACTAAGTTAGAGGAT  699
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GATTTATGGAGATTGTAATGATTATTTTTTGTAATACTAAGTTAGAGGAT  700

seq1  TTTTTGGCAGTAGATCAATTTGGAGAAAATTGAAATACAGTTTTTGAGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGCAGTAGATCAATTTGGAGAAAATTGAAATACAGTTTTTGAGTG  750

seq1  AGGAATGTCACTGAATCAC-AAAACTGTCAGTGTGTGTGTGTGTGTGTGT  798
      ||||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  AGGAATGTCACTGAATCACAAAAACTGTCAG-GTGTGTGTGTGTGTGTGT  799

seq1  GTGTG  803
      |||||
seq2  GTGTG  804

seq1: chr15_87823504_87824085
seq2: B6Ng01-056P14.g_69_650 (reverse)

seq1  CCCCCCCCCCCAAATGTTTTCAGGATTTTTCTTATTATTGATTGGACCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCAAATGTTTTCAGGATTTTTCTTATTATTGATTGGACCCC  50

seq1  TCATCTGGGACATTTCCTTCTTTGGCCTTACAATTCATTGCTTTCCATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGGGACATTTCCTTCTTTGGCCTTACAATTCATTGCTTTCCATTG  100

seq1  CTATCACTGGAATTTCAGAAAGATCACATTGATGGAGCCTACCCTATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCACTGGAATTTCAGAAAGATCACATTGATGGAGCCTACCCTATTCT  150

seq1  GCGGCCTCAGCACTGAGATTTCCCACAGCAGCTGAGGCAGGGAGGGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCCTCAGCACTGAGATTTCCCACAGCAGCTGAGGCAGGGAGGGGCAG  200

seq1  AGAGAATGGCTGAGCATCGCATCCAGTTCTTCTCTCTCCTGGATGGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGGCTGAGCATCGCATCCAGTTCTTCTCTCTCCTGGATGGACCT  250

seq1  ATGGTCTGAAAATGGAAAGATGATGCCCCCTAAACAGGTGACAGCGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTGAAAATGGAAAGATGATGCCCCCTAAACAGGTGACAGCGAAGG  300

seq1  TAGGTGTGTCCTGGGTGCCCTGGTAGAGCACTCAGGAGGAATGTGACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGTGTCCTGGGTGCCCTGGTAGAGCACTCAGGAGGAATGTGACTGT  350

seq1  GGGGTAACAATAATGTCTATAGCATGGGGGACCACGAGGTAAATGAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAACAATAATGTCTATAGCATGGGGGACCACGAGGTAAATGAGTTT  400

seq1  GGAGGACTTTGAGCATCATTCTAACCTAGGAAACAGATGAGACAGCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGACTTTGAGCATCATTCTAACCTAGGAAACAGATGAGACAGCTTGG  450

seq1  TTGTCCACACCTCTGCACCCTCCCAGGTATTCTGAACTCAATTACAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCACACCTCTGCACCCTCCCAGGTATTCTGAACTCAATTACAAAGA  500

seq1  CGACATAGTTCCCACCAGGTCAGAAATGGAATTTCACTGAGCAAACTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACATAGTTCCCACCAGGTCAGAAATGGAATTTCACTGAGCAAACTTGG  550

seq1  GTTCTGTGTTAGCCCCACCACACCTTGAATTC  582
      ||||||||||||||||||||||||||||||||
seq2  GTTCTGTGTTAGCCCCACCACACCTTGAATTC  582