BAC Information

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BAC

Clone NameB6Ng01-057H23
Chromosome15 (Build37)
Map Location 93,599,655 - 93,747,845
singlet/doubletdoublet
Overlap genenone
Upstream genePdzrn4, LOC100042552, LOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631
Downstream geneD630010B17Rik, Adamts20, Pus7l, Irak4, Twf1, Tmem117
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057H23.bB6Ng01-057H23.g
ACCDH879349DH879350
length2551,123
definitionDH879349|Mus musculus domesticus DNA, BAC clone: B6Ng01-057H23, 5' end.DH879350|Mus musculus domesticus DNA, BAC clone: B6Ng01-057H23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,599,655 - 93,599,889)(93,746,698 - 93,747,845)
sequence
tctcttctctcatgaccccatagagaggttttagactcagaaacctattc
tgaagtgttcgtggatttctgaaaggccaagccaccgtaagatgttgagt
gaaggtttagaaaagacaactgcctaaggttggacatgggtccttcacta
cacagcatttgtaattacagaggtgttctctgcaggcaactcaggagtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgagggggggggtgggagtgtgt
gtgtg
gaattctgcagccatggtgccctgcagtgagccttggtgctgtgtattct
ccgggagcaatagaagctcttatatctattttgagtaaacagtctttgca
gcctccgatgcaatttattcaaggatgcacacagcaggatcctgcctcaa
ataactaaccctgttaccgggagtgtttcctgaacaaattcctctgtgag
ggacaaacatggggcttcttgtgccttttaaggaaatgagtttttttatt
gaaaaagaaagaaaaaaaaaaaaaccctgtgagttcaaactgaaactcac
aagtcagcagtctgaggaatgcggctccaggctatagatagtaagctagg
ctgtagccaaaatcagggctgaatcaaataattgcatttttttttttatc
ctcaaattctttccttctacatttccttctacattgtttgtaaactacat
ttggaaacagcgtctcctgggacattcttagtccctgtcttatgcaaagg
atgttagaatggtacagtaagtaactcctggctattggaacttacttagt
aacaggaactgtgacaactgaaaaatgataagctcagtggtccttgacgc
aacctgaaagtggcaatgtatctcccttggcataaagctcaggacaaaca
gaataaaagcactgtactgtcttggctagaaatacagaccagtggctctc
aaccttcctaatgctgcaaccctttaatacagttcccagtgctgtggtga
tccccttaaccataagattattttcattgctacttcataactgtattttg
ctagtgttatgaattgcaatctaaacacatgttttctgagggctttagtg
aactcccatgaaagggttgttcaaccctcttcagagggttgcacacatag
cttgagaaacaattatctagacagtagcaggacaggtagaggagaatctt
atcctccagtttagttctactatgggaaatgtgtttattctacttcagag
tagattctgaaattgccttaccagtgttgaaaaagtgggctcttggtctt
aacataacttattgatctgtatccattcattagtcggagctgaatggctt
tatcacacacattttttttctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_93599655_93599889
seq2: B6Ng01-057H23.b_52_286

seq1  TCTCTTCTCTCATGACCCCATAGAGAGGTTTTAGACTCAGAAACCTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTCTCATGACCCCATAGAGAGGTTTTAGACTCAGAAACCTATTC  50

seq1  TGAAGTGTTCGTGGATTTCTGAAAGGCCAAGCCACCGTAAGATGTTGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGTTCGTGGATTTCTGAAAGGCCAAGCCACCGTAAGATGTTGAGT  100

seq1  GAAGGTTTAGAAAAGACAACTGCCTAAGGTTGGACATGGGTCCTTCACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTTAGAAAAGACAACTGCCTAAGGTTGGACATGGGTCCTTCACTA  150

seq1  CACAGCATTTGTAATTACAGAGGTGTTCTCTGCAGGCAACTCAGGAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCATTTGTAATTACAGAGGTGTTCTCTGCAGGCAACTCAGGAGTGT  200

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGGGGG  235
      |||||||||||||||||||||||||||| ||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGGGG  235

seq1: chr15_93746698_93747845
seq2: B6Ng01-057H23.g_69_1191 (reverse)

seq1  CCAGAAAAAAAAAACATGGTCGCTGAATAAAAGCCATCAAAAGCCTCCTG  50
      ||||||||||||      ||   |||   ||||||||  |    |||| |
seq2  CCAGAAAAAAAA-----TGTGTGTGA--TAAAGCCATTCA---GCTCC-G  39

seq1  ACTAAATGCAAATTGTGTAACAGATCAATAAGTTATTTGTATGAGACCAA  100
      ||| ||||  |||   |  ||||||||||||||||| |   | |||||||
seq2  ACT-AATG--AAT--GGATACAGATCAATAAGTTATGT---TAAGACCAA  81

seq1  GAGACCCACTATCTTCAAACACTGGTAAGGCAATTTCAGAATCTACTCTG  150
      ||| |||||| | ||| |||||||||||||||||||||||||||||||| 
seq2  GAG-CCCACT-TTTTC-AACACTGGTAAGGCAATTTCAGAATCTACTCT-  127

seq1  GAGGTAG-ATGAACACATTTCCCATAGTAGGAACTAAACTGGAGGTTAAG  199
      || |||| || |||||||||||||||||| ||||||||||||||| ||||
seq2  GAAGTAGAATAAACACATTTCCCATAGTA-GAACTAAACTGGAGGATAAG  176

seq1  ATTCTCCTCTACCTGTCCTGCTACTGTCTAGGTAATTGTTTCTCAAGCTA  249
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATTCTCCTCTACCTGTCCTGCTACTGTCTAGATAATTGTTTCTCAAGCTA  226

seq1  TGTGTTGCAACCCTCTTGAGGGGGTTGAACAACCCTTTCATGGG-GTTCA  298
      |||| |||||||||||  || ||||||||||||||||||||||| |||||
seq2  TGTG-TGCAACCCTCTGAAGAGGGTTGAACAACCCTTTCATGGGAGTTCA  275

seq1  CCTAAAGCCCTCAGAAAACATGTGTTTAGATTGCAATTCATAACACTAGC  348
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTAAAGCCCTCAGAAAACATGTGTTTAGATTGCAATTCATAACACTAGC  324

seq1  AAAATTACAGTTATGAAGTAGCAATGAAAATAATCTTATGGTTAAGGGGA  398
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAA-TACAGTTATGAAGTAGCAATGAAAATAATCTTATGGTTAAGGGGA  373

seq1  TCACCACAGCACTGGGAACTGTATTAAAGGGTTGCAGCATTAGGAAGGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACAGCACTGGGAACTGTATTAAAGGGTTGCAGCATTAGGAAGGTT  423

seq1  GAGAGCCACTGGTCTGTATTTCTAGCCAAGACAGTACAGTGCTTTTATTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCCACTGGTCTGTATTTCTAGCCAAGACAGTACAGTGCTTTTATTC  473

seq1  TGTTTGTCCTGAGCTTTATGCCAAGGGAGATACATTGCCACTTTCAGGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTCCTGAGCTTTATGCCAAGGGAGATACATTGCCACTTTCAGGTT  523

seq1  GCGTCAAGGACCACTGAGCTTATCATTTTTCAGTTGTCACAGTTCCTGTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTCAAGGACCACTGAGCTTATCATTTTTCAGTTGTCACAGTTCCTGTT  573

seq1  ACTAAGTAAGTTCCAATAGCCAGGAGTTACTTACTGTACCATTCTAACAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTAAGTTCCAATAGCCAGGAGTTACTTACTGTACCATTCTAACAT  623

seq1  CCTTTGCATAAGACAGGGACTAAGAATGTCCCAGGAGACGCTGTTTCCAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCATAAGACAGGGACTAAGAATGTCCCAGGAGACGCTGTTTCCAA  673

seq1  ATGTAGTTTACAAACAATGTAGAAGGAAATGTAGAAGGAAAGAATTTGAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTTTACAAACAATGTAGAAGGAAATGTAGAAGGAAAGAATTTGAG  723

seq1  GATAAAAAAAAAAATGCAATTATTTGATTCAGCCCTGATTTTGGCTACAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAAAAAAAATGCAATTATTTGATTCAGCCCTGATTTTGGCTACAG  773

seq1  CCTAGCTTACTATCTATAGCCTGGAGCCGCATTCCTCAGACTGCTGACTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTTACTATCTATAGCCTGGAGCCGCATTCCTCAGACTGCTGACTT  823

seq1  GTGAGTTTCAGTTTGAACTCACAGGGTTTTTTTTTTTTTCTTTCTTTTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTTCAGTTTGAACTCACAGGGTTTTTTTTTTTTTCTTTCTTTTTC  873

seq1  AATAAAAAAACTCATTTCCTTAAAAGGCACAAGAAGCCCCATGTTTGTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAAACTCATTTCCTTAAAAGGCACAAGAAGCCCCATGTTTGTCC  923

seq1  CTCACAGAGGAATTTGTTCAGGAAACACTCCCGGTAACAGGGTTAGTTAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGAGGAATTTGTTCAGGAAACACTCCCGGTAACAGGGTTAGTTAT  973

seq1  TTGAGGCAGGATCCTGCTGTGTGCATCCTTGAATAAATTGCATCGGAGGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCAGGATCCTGCTGTGTGCATCCTTGAATAAATTGCATCGGAGGC  1023

seq1  TGCAAAGACTGTTTACTCAAAATAGATATAAGAGCTTCTATTGCTCCCGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGACTGTTTACTCAAAATAGATATAAGAGCTTCTATTGCTCCCGG  1073

seq1  AGAATACACAGCACCAAGGCTCACTGCAGGGCACCATGGCTGCAGAATTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACACAGCACCAAGGCTCACTGCAGGGCACCATGGCTGCAGAATTC  1123