BAC Information

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BAC

Clone NameB6Ng01-057J14
Chromosome15 (Build37)
Map Location 5,382,245 - 5,383,222
singlet/doubletsinglet
Overlap genenone
Upstream genePlcxd3, C6, LOC100039214, 4930455B06Rik, C7, Card6, Rpl37, LOC100039281, Prkaa1, Ttc33, Ptger4, LOC100039322, LOC100039308
Downstream geneLOC666291, LOC666319, LOC100039358, LOC666323, Dab2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057J14.bB6Ng01-057J14.g
ACCDH879421DH879422
length9681,110
definitionDH879421|Mus musculus domesticus DNA, BAC clone: B6Ng01-057J14, 5' end.DH879422|Mus musculus domesticus DNA, BAC clone: B6Ng01-057J14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatagctgagtcaaatggttttctgagaattggcttatgactct
cagaacaccgaaataaggagtttaggacatttatataagaactcagattt
ctgccctacaggtactacacctctagacatagatgaatgctgctctcagc
tgctgtcagtgagggttatcttttgattagtgggcaactcgtccatacag
agactcacagctttttcaagtgaggaaagtaagtgtctgaagagtaattg
gtcttaaacaggacatctgtgtctactgctcagggccattgtgagagaag
agtgtgtgcaaagaatgcaagagtagaggatgtgaaggaaccatgcaaga
tagtgtcttggggacacagcacagctgttgtgctcataaactcatcacat
cttacttgcataaaatttgcacaacattgggtatccttatttcagcatgc
ctgaaggagcatatgagactccattttcactgaagaactatgaatagtta
gttattgctagtggagggttatcattttctttagtgatatagccaatttt
aagttgcctatgttccactaaataaccttccacccaagttcatgaaaata
attacagttaactcagtgggacacacacacacacacacacacacacacac
acacacacacacaccatcaattaaggcaagaggaagggtttaatttacag
agggagggaaataaggtgggtattgggggataaaaatgaccaaacattta
tttcgttcacttatatatacattgttaaagaataataataaaaatggaac
ttgtgttccttgattcttgcatgggttccctgtttatgacatgagtgtga
tgaccacatattcttttaaagatcattcttataaatgaatttactttatt
aaaattgtctccatgtgagtaaatggattttgcccattggtacaaaatac
tatgaatttatgcataca
gaattccttatatattttgaatgtggatatatggatgaatatggaatatg
aatgaatacatattggatgtgaaattggaacaaaatctttttccaattct
gcaggctgctgctttgtctgaataactgggtcctttgtcttgtagaagct
tttcagttttgtgaggtgccatatattaactgtgatcttagcacctccac
tactgctgttctgttcagaaaggcttctcctttgtgtacgagttcgaggc
tattctccagtttctcttctatcagtttcagtgtgactggttttatggtg
aggcctttgctccctttggagttcagttttgggcagggtgataattatat
ttacattcttctgcacacagactcccagtctgaccatcattatttgttga
agatgctgtcttttatacagtgtgtatttatgggttctttattaaaacat
aggtgtccacaagcttgtggatttatgtctaggtcttcagtttgagtcca
ttcatcaatatgcctgtttttatgccaatagcatgtgatttttattacta
tagctttaacatgaagattaagtatatagcatggtgaatgtcatgcagta
gatattatgcattatttgcaaatattataatgtgcacctaaaccactaag
ctatctaaaatccccacacacaaaagggtaactgaactgatcataaactc
taagatcatatagtatgactttagtaactagcttgggcaagcatctaaga
atattgctcaagtaatcagaaagccactccacatggaccacagttctgat
ttcaacttgtaactgagaatgggtggaataggtggaataggttacctttt
ccatcccatcattattacacaagaaagcaaagaaattgttaggaaattag
atctatcttagacttactctattgaccactgtgacaatcagtcaaattaa
tttaatatttcactaacttattaacttttttgcctttgtaaatatttaaa
tacacataggcatataaagaaaaactaatgcaaaaaccctggtttcttgg
aatacttccaggacctttatttgttaacccatttctcctacctctcccag
ccctcctcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_5382245_5383222
seq2: B6Ng01-057J14.b_39_1006

seq1  GAATTCTATAGCTGAGTCAAATGGTTTTCTGAGAATTGGCTTATGACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAGCTGAGTCAAATGGTTTTCTGAGAATTGGCTTATGACTCT  50

seq1  CAGAACACCGAAATAAGGAGTTTAGGACATTTATATAAGAACTCAGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACACCGAAATAAGGAGTTTAGGACATTTATATAAGAACTCAGATTT  100

seq1  CTGCCCTACAGGTACTACACCTCTAGACATAGATGAATGCTGCTCTCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTACAGGTACTACACCTCTAGACATAGATGAATGCTGCTCTCAGC  150

seq1  TGCTGTCAGTGAGGGTTATCTTTTGATTAGTGGGCAACTCGTCCATACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCAGTGAGGGTTATCTTTTGATTAGTGGGCAACTCGTCCATACAG  200

seq1  AGACTCACAGCTTTTTCAAGTGAGGAAAGTAAGTGTCTGAAGAGTAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCACAGCTTTTTCAAGTGAGGAAAGTAAGTGTCTGAAGAGTAATTG  250

seq1  GTCTTAAACAGGACATCTGTGTCTACTGCTCAGGGCCATTGTGAGAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAAACAGGACATCTGTGTCTACTGCTCAGGGCCATTGTGAGAGAAG  300

seq1  AGTGTGTGCAAAGAATGCAAGAGTAGAGGATGTGAAGGAACCATGCAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTGCAAAGAATGCAAGAGTAGAGGATGTGAAGGAACCATGCAAGA  350

seq1  TAGTGTCTTGGGGACACAGCACAGCTGTTGTGCTCATAAACTCATCACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTCTTGGGGACACAGCACAGCTGTTGTGCTCATAAACTCATCACAT  400

seq1  CTTACTTGCATAAAATTTGCACAACATTGGGTATCCTTATTTCAGCATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTGCATAAAATTTGCACAACATTGGGTATCCTTATTTCAGCATGC  450

seq1  CTGAAGGAGCATATGAGACTCCATTTTCACTGAAGAACTATGAATAGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAGCATATGAGACTCCATTTTCACTGAAGAACTATGAATAGTTA  500

seq1  GTTATTGCTAGTGGAGGGTTATCATTTTCTTTAGTGATATAGCCAATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGCTAGTGGAGGGTTATCATTTTCTTTAGTGATATAGCCAATTTT  550

seq1  AAGTTGCCTATGTTCCACTAAATAACCTTCCACCCAAGTTCATGAAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCCTATGTTCCACTAAATAACCTTCCACCCAAGTTCATGAAAATA  600

seq1  ATTACAGTTAACTCAGTGGGACACACACACACACACACACACACACACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGTTAACTCAGTGGGACACACACACACACACACACACACACACAC  650

seq1  ACACACACACACACCATCAATTAAGGCAAGAGGAAGGGTTTAATTTACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACCATCAATTAAGGCAAGAGGAAGGGTTTAATTTACAG  700

seq1  AGGGAGGGAAATAAGGTGGGTATTGGGGGATAAAAATGACCAAACATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGAAATAAGGTGGGTATTGGGGGATAAAAATGACCAAACATTTA  750

seq1  TTTCGTTCACTTATATATACATTGTTAAAGAATAATAATAAAAATGGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTTCACTTATATATACATTGTTAAAGAATAATAATAAAAATGGAAC  800

seq1  TTGTGTTCCTTGATTTCTTGCATGGTGTTCCTTGTTTTATGACATGAGTG  850
      ||||||||||||| ||||||||||| ||||| || |||||||||||||||
seq2  TTGTGTTCCTTGA-TTCTTGCATGG-GTTCCCTG-TTTATGACATGAGTG  847

seq1  TGATGACCACATATTTCTTTTAAAGATCATTCTTATAAATGAATTTACTT  900
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGATGACCACATA-TTCTTTTAAAGATCATTCTTATAAATGAATTTACTT  896

seq1  TATTTAAAAATTGTCCTCCATGTGAGTAATATGGATTTTGCCCATTGGTA  950
      ||||  |||||||| |||||||||||||| ||||||||||||||||||||
seq2  TATT--AAAATTGT-CTCCATGTGAGTAA-ATGGATTTTGCCCATTGGTA  942

seq1  CAAAATACTATGAATTTTATTGCATACA  978
      |||||||||||||||||   ||||||||
seq2  CAAAATACTATGAATTT--ATGCATACA  968