BAC Information

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BAC

Clone NameB6Ng01-057O24
Chromosome15 (Build37)
Map Location 77,002,502 - 77,003,512
singlet/doubletsinglet
Overlap geneRbm9
Upstream genePlec1, LOC671535, Grina, Spatc1, LOC100041269, Oplah, Exosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5, Bop1, Scx, Hsf1, Dgat1, Scrt1, LOC666497, EG666504, Fbxl6, Gpr172b, Adck5, Cpsf1, Slc39a4, Vps28, Nfkbil2, Cyhr1, Kifc2, Foxh1, Ppp1r16a, Gpt1, Mfsd3, Recql4, Lrrc14, Lrrc24, C030006K11Rik, D15Wsu169e, Zfp251, Zfp7, Commd5, Rpl8, Zfp647, 1110038F14Rik, Mb, Apol6
Downstream geneLOC100042318, Apol3, BC020489, BC085284, LOC624454, EG666639, 9030421J09Rik, EG626615, 2210421G13Rik, 9130218O11Rik, LOC666661, A330102K04Rik, EG545115, LOC666348, LOC666679, 2310016F22Rik, Apol2, Myh9, Txn2, Foxred2, Eif3s7, Cacng2, Rabl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057O24.bB6Ng01-057O24.g
ACCDH879652DH879653
length1,006735
definitionDH879652|Mus musculus domesticus DNA, BAC clone: B6Ng01-057O24, 5' end.DH879653|Mus musculus domesticus DNA, BAC clone: B6Ng01-057O24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgaatggtctaagccagagtgtgtgctggagactggggctatg
aggccagactagatggagtcaaatactgaagggaggctctcagccttatg
ttttgggaggcactgtctctctgcctcgaattctttctctggaagaagaa
ggtaacaacaggaactcacagctgctgtgctctctaagtcagtgcacaga
caagtccaccacacagtgatgatccgcagcatcacctctcataattcagg
aaggagggaatattacctctacgtgagcttagaggaaaacatgagttttt
atacctctcattcatccttgtagtaccaaatacactagaagcacccccac
caagtccaatataaagagttaatggaaaaggggactgtagtgtgttggaa
gtatggctgcctcttcccagactgcatttatcactctgcatcctacagtg
catacgaacaatcagccatcagggcagctctcattcccactgagagaggg
gcagggctgacagcagcagtggggcggtgtgggaaccctcaggttggcac
cagccccttgctctattcagacctgtaatctcttctgactttgatttaat
gcagcaattactggtaatgtggttttgaaggagataaatgcccagtgtag
ctgtctgtcgcttactctgctcatgatgcaagaacatttttaaattaaaa
ttcccttttatgataaaggagctgcttcactgaatgttcctgtgcaggcc
tgatacggagcatccccaaagaggattagaaactaacaccctccctcctg
cacaattaccctaacctaaagtaggtcctttaaccctaaagtttttctca
tttatataataccagtcttctttctacttttcaagatcatgatgtcagtc
attagagattcactaaaagattcagctctcttttggtaagaaattatctt
aagttcctttaaataataagcaaggaaacattctggccccatgcctaatg
acctgt
gaattcattacgggggttcttatctgtggctatttaccagggtttggaaa
taaagccagctgagcctgaggctctcacttgtaatccctgcagtcaggag
gctgggggagtaagttaaagtgaatggagccttatcttaaaaataaataa
atagtgttttctgaaagccagtgagatgctcagcaagtaaaggcacttcc
ggccaagcccgacaacaagagcgacgctcctgggacccgcatggtgaaag
gagagaaccaactaagcacttccggccaagccggacaagaacttcgttcc
tgggactcacgtggtggaaggagagaaccaacttcctcaaatcgtcctct
gatttccatacacgctgtgacacacgtgtgcccaaagccataatgtatat
acatacacaaagtaaatgaatgtaacgaaaatcattagtaggagggctga
agagttgactccgcagttaaaagccctggctgctcttgcagaggacctga
gttcgtttctcagcacccacgtggtgactcctgacaatctgtaactccag
ttccagaggatctgatggcctcttctggcttctcagggtaccaggcatac
atgtggtgcagaaatacacgcagacaaacacatctatacacaagccaggc
agtggtggtggcgcacgtctttaattccagcatttgggaggcagaagcag
gcagacttctgagttcggggcccagcctagttctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_77002502_77003512
seq2: B6Ng01-057O24.b_45_1050

seq1  GAATTCCTGAATGGTCTAAGCCAGAGTGTGTGCTGGAGACTGGGGCTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAATGGTCTAAGCCAGAGTGTGTGCTGGAGACTGGGGCTATG  50

seq1  AGGCCAGACTAGATGGAGTCAAATACTGAAGGGAGGCTCTCAGCCTTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGACTAGATGGAGTCAAATACTGAAGGGAGGCTCTCAGCCTTATG  100

seq1  TTTTGGGAGGCACTGTCTCTCTGCCTCGAATTCTTTCTCTGGAAGAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGAGGCACTGTCTCTCTGCCTCGAATTCTTTCTCTGGAAGAAGAA  150

seq1  GGTAACAACAGGAACTCACAGCTGCTGTGCTCTCTAAGTCAGTGCACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACAACAGGAACTCACAGCTGCTGTGCTCTCTAAGTCAGTGCACAGA  200

seq1  CAAGTCCACCACACAGTGATGATCCGCAGCATCACCTCTCATAATTCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCACCACACAGTGATGATCCGCAGCATCACCTCTCATAATTCAGG  250

seq1  AAGGAGGGAATATTACCTCTACGTGAGCTTAGAGGAAAACATGAGTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGGAATATTACCTCTACGTGAGCTTAGAGGAAAACATGAGTTTTT  300

seq1  ATACCTCTCATTCATCCTTGTAGTACCAAATACACTAGAAGCACCCCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTCTCATTCATCCTTGTAGTACCAAATACACTAGAAGCACCCCCAC  350

seq1  CAAGTCCAATATAAAGAGTTAATGGAAAAGGGGACTGTAGTGTGTTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCAATATAAAGAGTTAATGGAAAAGGGGACTGTAGTGTGTTGGAA  400

seq1  GTATGGCTGCCTCTTCCCAGACTGCATTTATCACTCTGCATCCTACAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGCTGCCTCTTCCCAGACTGCATTTATCACTCTGCATCCTACAGTG  450

seq1  CATACGAACAATCAGCCATCAGGGCAGCTCTCATTCCCACTGAGAGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACGAACAATCAGCCATCAGGGCAGCTCTCATTCCCACTGAGAGAGGG  500

seq1  GCAGGGCTGACAGCAGCAGTGGGGCGGTGTGGGAACCCTCAGGTTGGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCTGACAGCAGCAGTGGGGCGGTGTGGGAACCCTCAGGTTGGCAC  550

seq1  CAGCCCCTTGCTCTATTCAGACCTGTAATCTCTTCTGACTTTGATTTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCTTGCTCTATTCAGACCTGTAATCTCTTCTGACTTTGATTTAAT  600

seq1  GCAGCAATTACTGGTAATGTGG-TTTGAAGGAGATAAATGCCCAGTGTAG  649
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCAGCAATTACTGGTAATGTGGTTTTGAAGGAGATAAATGCCCAGTGTAG  650

seq1  CTGTCTGTCGCTTACTCTGCTCATGATGCAAGAACATTTTTAAATTAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCGCTTACTCTGCTCATGATGCAAGAACATTTTTAAATTAAAA  700

seq1  TTCCC-TTTATGATAAAGGAGCTGCTTCACTGAATGTTCCTGTGCAGGCC  748
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTTATGATAAAGGAGCTGCTTCACTGAATGTTCCTGTGCAGGCC  750

seq1  TGATACGGAGCATCCCCAAAGAGGATTAGAAACTAACACCCTCCCTCCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACGGAGCATCCCCAAAGAGGATTAGAAACTAACACCCTCCCTCCTG  800

seq1  CACAATTACCCTAAACCTAAAGTAGGTCC-TTAACCCTAAAGTTTTTCTC  847
      |||||||||||| |||||||||||||||| ||||||||||||||||||||
seq2  CACAATTACCCT-AACCTAAAGTAGGTCCTTTAACCCTAAAGTTTTTCTC  849

seq1  ATTTATATAATTACAGTCTTCTTTCTACTTTTCAAGATCATGATGTCAG-  896
      |||||||||||  |||||||||||||||||||||||||||||||||||| 
seq2  ATTTATATAATACCAGTCTTCTTTCTACTTTTCAAGATCATGATGTCAGT  899

seq1  CATTAGAGAATCCACT-AAAGATTCAGCTCTCTTTTTGGTAAAGAAATTA  945
      |||||||| || |||| ||||||||||||||| ||||||| |||||||||
seq2  CATTAGAG-ATTCACTAAAAGATTCAGCTCTC-TTTTGGT-AAGAAATTA  946

seq1  TCTTAAGTTCCTTTAAAATAAATAAGCAAAGTAAACATTCATGCACACAT  995
      |||||||||||||||||   ||||||| ||| |||||||| ||  | |||
seq2  TCTTAAGTTCCTTTAAA--TAATAAGC-AAGGAAACATTC-TGGCCCCAT  992

seq1  GCCTAAATGACACTGT  1011
      |||| |||||| ||||
seq2  GCCT-AATGAC-CTGT  1006