BAC Information

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BAC

Clone NameB6Ng01-058H23
Chromosome15 (Build37)
Map Location 89,028,601 - 89,182,482
singlet/doubletdoublet
Overlap geneSaps2, Sbf1, Adm2, Miox, Tmem112b
Upstream geneZdhhc25, Brd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik
Downstream geneNcaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3, Acr, Rabl2a, LOC676575, Syt10, Alg10b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058H23.bB6Ng01-058H23.g
ACCDH880059DH880060
length4381,088
definitionDH880059|Mus musculus domesticus DNA, BAC clone: B6Ng01-058H23, 5' end.DH880060|Mus musculus domesticus DNA, BAC clone: B6Ng01-058H23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,028,601 - 89,029,044)(89,181,384 - 89,182,482)
sequence
actctgtagaccaggacacattgactctcttaaccatagtgtttaaacct
gtattaaaatgttttcattaagccccaactttcattctgtcagaaggcag
atcacagtgctgacagaagtaatgagggtgagaagtacttagcccgagta
tgtcattgttcttagagccatctctttcttattgtcctggaagtgctgtg
ataatactaaactataaacaaagatatttccattaaaaaaacaaacaaac
aaaccaaactctgctttataagatggacagtcttttctatgtcaaagcca
caattctgagtctggtttgcggatccctaaaggtctagaactcgggctat
tgaggatggtagagcagtcatcctatccagcatactatgtgattttggtg
ttttcattttttttttaaagatttatttatttatgggg
gaattcttcccatctgtatccttgggggacccaacactggaaaccctgct
ccaacagtttggactaaaggtatgaaggagccagctgaactgtgagaggt
agcagggtgcttgcctgttgcaggagtgaaccccgtgggcttttcttggt
ttttgtctccgtaggataagagtccaccccgggcccgcagccccagcaat
ggcctagctcagacactgaactgggtgcggacacagctgtctcccctgga
gcctcccatcctgctctgggggctcttcggggcagtggtggctatccgag
ttgtgcagaccctactcgccccccgcccgctccagtcctcaaaacagact
agagaggaaaaacgtaagcaaacctccaagaaggattccagagccgcctc
tgagcaggctgccgccaacagcaacagcagggactcctgggcccctcggc
ggaaaaaatagcgtcgtgtgctaccatcagctggccacgtgtcctaatga
tgaagtcagagccccgggatcccagcacacaccgtgacacagcccagcca
ctgtgccttagccagtcctgccagggcagatgcagacgggaacgccaccc
ccgaggaatgctgggtgtcacctttgagagccctgctcatccccctacac
caaccacatccttcgctactcaccttctactgtcttggaatcaacccaga
agtgggcctgcggcctagctcaggacttctcctgaaacactgtaatcagt
gtaccatagatgcacaggcctgagtctggagttcctacccagccccactt
tggagagggggagctaaacctgctgaggacaggagccaggggaagtgggt
ccttgagactgtgcctgcctgcccctcagactgtaccaataaaggcccat
ttgtacataccatttactagtggtttttcttctgagaagcctgaggatag
ctggcacagcctaaactggttactgactgggctaaatgggctctcttctt
gtagctcaatgttctccataaaataaacaaaaagcctgttatgaaagctt
gcgtgtggcggggcttgaggtcgtggaggagagaaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_89028601_89029044
seq2: B6Ng01-058H23.b_45_488

seq1  GAATTCACTCTGTAGACCAGGACACATTGACTCTCTTAACCATAGTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGACACATTGACTCTCTTAACCATAGTGTTT  50

seq1  AAACCTGTATTAAAATGTTTTCATTAAGCCCCAACTTTCATTCTGTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGTATTAAAATGTTTTCATTAAGCCCCAACTTTCATTCTGTCAGA  100

seq1  AGGCAGATCACAGTGCTGACAGAAGTAATGAGGGTGAGAAGTACTTAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGATCACAGTGCTGACAGAAGTAATGAGGGTGAGAAGTACTTAGCC  150

seq1  CGAGTATGTCATTGTTCTTAGAGCCATCTCTTTCTTATTGTCCTGGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTATGTCATTGTTCTTAGAGCCATCTCTTTCTTATTGTCCTGGAAGT  200

seq1  GCTGTGATAATACTAAACTATAAACAAAGATATTTCCATTAAAAAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGATAATACTAAACTATAAACAAAGATATTTCCATTAAAAAAACAA  250

seq1  ACAAACAAACCAAACTCTGCTTTATAAGATGGACAGTCTTTTCTATGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACCAAACTCTGCTTTATAAGATGGACAGTCTTTTCTATGTCA  300

seq1  AAGCCACAATTCTGAGTCTGGTTTGCGGATCCCTAAAGGTCTAGAACTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACAATTCTGAGTCTGGTTTGCGGATCCCTAAAGGTCTAGAACTCG  350

seq1  GGCTATTGAGGATGGTAGAGCAGTCATCCTATCCAGCATACTATGTGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTGAGGATGGTAGAGCAGTCATCCTATCCAGCATACTATGTGATT  400

seq1  TTGGTGTTTTCATTTTTTTTTTAAAGATTTATTTATTTATGGGG  444
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTTTTCATTTTTTTTTTAAAGATTTATTTATTTATGGGG  444

seq1: chr15_89181384_89182482
seq2: B6Ng01-058H23.g_68_1155 (reverse)

seq1  AGTTTCATCTTCCTCCACCGGCCTCACAGCCCTCGCCACACCGCAGCTTC  50
      |||||| || ||||||| || ||||| ||||| ||||||||   ||||| 
seq2  AGTTTC-TC-TCCTCCA-CGACCTCA-AGCCC-CGCCACACGCAAGCTT-  44

seq1  TCATAACCAGGCCTTTTTGTTTATTTTATGGAGAACATTGAGCTACAAGG  100
      |||||| |||| ||||||||||||||||||||||||||||||||||||| 
seq2  TCATAA-CAGG-CTTTTTGTTTATTTTATGGAGAACATTGAGCTACAAGA  92

seq1  AGGGAGCCCATTTAGCCCAGTCAGTAACCAGTCTAGGCTGTGCCAGCTAT  150
      || ||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGAGAGCCCATTTAGCCCAGTCAGTAACCAGTTTAGGCTGTGCCAGCTAT  142

seq1  CCTCAGGCCTCCTCAGAAGGAAAAACCACTAGTAAATGGGTATGTACAAA  200
      ||||||| || ||||||| |||||||||||||||||| ||||||||||||
seq2  CCTCAGG-CTTCTCAGAA-GAAAAACCACTAGTAAAT-GGTATGTACAAA  189

seq1  TGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGA  239

seq1  CCCACTTCCCCTGGCTCCTGTCCTCAGCAGGTTTAGCTCCCCCTCTCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTCCCCTGGCTCCTGTCCTCAGCAGGTTTAGCTCCCCCTCTCCAA  289

seq1  AGTGGGGCTGGGTAGGAACTCCAGACTCAGGCCTGTGCATCTATGGTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGCTGGGTAGGAACTCCAGACTCAGGCCTGTGCATCTATGGTACA  339

seq1  CTGATTACAGTGTTTCAGGAGAAGTCCTGAGCTAGGCCGCAGGCCCACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTACAGTGTTTCAGGAGAAGTCCTGAGCTAGGCCGCAGGCCCACTT  389

seq1  CTGGGTTGATTCCAAGACAGTAGAAGGTGAGTAGCGAAGGATGTGGTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTGATTCCAAGACAGTAGAAGGTGAGTAGCGAAGGATGTGGTTGG  439

seq1  TGTAGGGGGATGAGCAGGGCTCTCAAAGGTGACACCCAGCATTCCTCGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGGGGATGAGCAGGGCTCTCAAAGGTGACACCCAGCATTCCTCGGG  489

seq1  GGTGGCGTTCCCGTCTGCATCTGCCCTGGCAGGACTGGCTAAGGCACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCGTTCCCGTCTGCATCTGCCCTGGCAGGACTGGCTAAGGCACAGT  539

seq1  GGCTGGGCTGTGTCACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGCTGTGTCACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCAT  589

seq1  CATTAGGACACGTGGCCAGCTGATGGTAGCACACGACGCTATTTTTTCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGACACGTGGCCAGCTGATGGTAGCACACGACGCTATTTTTTCCG  639

seq1  CCGAGGGGCCCAGGAGTCCCTGCTGTTGCTGTTGGCGGCAGCCTGCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGGGCCCAGGAGTCCCTGCTGTTGCTGTTGGCGGCAGCCTGCTCAG  689

seq1  AGGCGGCTCTGGAATCCTTCTTGGAGGTTTGCTTACGTTTTTCCTCTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGGCTCTGGAATCCTTCTTGGAGGTTTGCTTACGTTTTTCCTCTCTA  739

seq1  GTCTGTTTTGAGGACTGGAGCGGGCGGGGGGCGAGTAGGGTCTGCACAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTTTGAGGACTGGAGCGGGCGGGGGGCGAGTAGGGTCTGCACAAC  789

seq1  TCGGATAGCCACCACTGCCCCGAAGAGCCCCCAGAGCAGGATGGGAGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGATAGCCACCACTGCCCCGAAGAGCCCCCAGAGCAGGATGGGAGGCT  839

seq1  CCAGGGGAGACAGCTGTGTCCGCACCCAGTTCAGTGTCTGAGCTAGGCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGAGACAGCTGTGTCCGCACCCAGTTCAGTGTCTGAGCTAGGCCA  889

seq1  TTGCTGGGGCTGCGGGCCCGGGGTGGACTCTTATCCTACGGAGACAAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGGGCTGCGGGCCCGGGGTGGACTCTTATCCTACGGAGACAAAAA  939

seq1  CCAAGAAAAGCCCACGGGGTTCACTCCTGCAACAGGCAAGCACCCTGCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAAAGCCCACGGGGTTCACTCCTGCAACAGGCAAGCACCCTGCTA  989

seq1  CCTCTCACAGTTCAGCTGGCTCCTTCATACCTTTAGTCCAAACTGTTGGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCACAGTTCAGCTGGCTCCTTCATACCTTTAGTCCAAACTGTTGGA  1039

seq1  GCAGGGTTTCCAGTGTTGGGTCCCCCAAGGATACAGATGGGAAGAATTC  1099
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGTTTCCAGTGTTGGGTCCCCCAAGGATACAGATGGGAAGAATTC  1088