BAC Information

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BAC

Clone NameB6Ng01-058M16
Chromosome15 (Build37)
Map Location 24,423,373 - 24,518,021
singlet/doubletdoublet
Overlap geneLOC666999
Upstream geneLOC666989
Downstream geneLOC100040492, LOC100040499, LOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058M16.bB6Ng01-058M16.g
ACCDH880273DH880274
length939965
definitionDH880273|Mus musculus domesticus DNA, BAC clone: B6Ng01-058M16, 5' end.DH880274|Mus musculus domesticus DNA, BAC clone: B6Ng01-058M16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,423,373 - 24,424,031)(24,517,040 - 24,518,021)
sequence
gaattccataagtagtctctgtgttctagccagcttctaaatacctggta
taatcaaatatgttactaccttgatgagccaagcttcagttgtttttgag
attgctgtgggacagtagcacaaatccacacatggagaaaaggtctattt
aaagttcaagacaagtgggattccttcaagtttctctctatttagtttaa
tgttggctactgatttgctgtagtttgcctttattatgtttaggtaaggg
ccttgatttcatggtctttccaagacttttatcatgaatgggtgttggat
tttgccaattgctttcatagcatctaaagaaatgagcatgtgtttttttt
tctttgaatttgtttataaagtggattacgttgatgtatttccatatatt
gaaccaaccctgcatcatagggatggcgtctatttgattgtgatggatga
ttgttttgatgtggtcttggattcagtttgtgaaaattttattgagtatt
tttgcatcgatattcataagggaaattagtctgaagttctctttctttgt
tgggtctttgtgtctacctcacaccagtcagaatggctaaggtaaaaagc
tcaagtgacagcaggtgatggtgaggatgtggagaaagaggaatactcct
ccattgctgttgggattgcaagctggtacaaccaccctggaaatcagttt
tgtgattcctcagaaaatctgatatcatactacctgagaacccaggtata
ccattcctgggcatatacccagaagatggtcccaacatgtaataaggaca
tatgctccactatgttcatagcaaccttatttataatagccagaagctgg
aagaacccagatgtccttcaacaaaggaatggatacagaaaatgtggtac
atttcacatgagtactactcagctttaagaatgatgaat
gaattctttggactttctatctgtctgtcatcattgatctgctgtgatct
actgtgtcatgcacatccactttcagtcatttgtaagaattccgaatctt
catcctaatccaggggggctttgtacaatatcgtcaacttccttctggta
cttcctgacaaaatatgtttgaagcaataggaatatttgtaatatttgtc
atattgttattttttaacttctgcatttatatgaccaaaatatgaattta
agtctacccacccccccacacacacatacacacaaacaaacacacacaca
catatatatacacacacacatctatctctatctctatctctatctctatc
tctatctctatctctatctctatctctatctctatctctatctctatctc
tatctctatctatctatatccatatctatatctatatctatatccatatc
tatatctatatccacacacccacacacatatttggagggtgagagggaag
gagggagggacaagggagatacagagcaacagattgcataatggacatgg
ataattatattttagttgaaatttacataatcagttgtaaattttggaaa
gtcaaaagaaaaaaaaagaaatcctgagattatgtggctgaatacaagtc
tgattatagatgtacacatattttattactgatggggaaattttgctttt
gtaaaataaaaaagattgtttttttattacatattttcctcaattacatt
tccaatgctatcccaaagtcccccataccctccccactacttccctacca
ctcattcccatttttttttggccctggcgttcccctgttctggggcatat
acagtttgcaagtccaatggctctctttgcagtgatggccactaggcatc
tctgataatatgcagctagagtcagagctcggggtactgttagttcatat
gtctcactatagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_24423373_24424031
seq2: B6Ng01-058M16.b_46_704

seq1  GAATTCCATAAGTAGTCTCTGTGTTCTAGCCAGCTTCTAAATACCTGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAGTAGTCTCTGTGTTCTAGCCAGCTTCTAAATACCTGGTA  50

seq1  TAATCAAATATGTTACTACCTTGATGAGCCAAGCTTCAGTTGTTTTTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAATATGTTACTACCTTGATGAGCCAAGCTTCAGTTGTTTTTGAG  100

seq1  ATTGCTGTGGGACAGTAGCACAAATCCACACATGGAGAAAAGGTCTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGTGGGACAGTAGCACAAATCCACACATGGAGAAAAGGTCTATTT  150

seq1  AAAGTTCAAGACAAGTGGGATTCCTTCAAGTTTCTCTCTATTTAGTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCAAGACAAGTGGGATTCCTTCAAGTTTCTCTCTATTTAGTTTAA  200

seq1  TGTTGGCTACTGATTTGCTGTAGTTTGCCTTTATTATGTTTAGGTAAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCTACTGATTTGCTGTAGTTTGCCTTTATTATGTTTAGGTAAGGG  250

seq1  CCTTGATTTCATGGTCTTTCCAAGACTTTTATCATGAATGGGTGTTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATTTCATGGTCTTTCCAAGACTTTTATCATGAATGGGTGTTGGAT  300

seq1  TTTGCCAATTGCTTTCATAGCATCTAAAGAAATGAGCATGTGTTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAATTGCTTTCATAGCATCTAAAGAAATGAGCATGTGTTTTTTTT  350

seq1  TCTTTGAATTTGTTTATAAAGTGGATTACGTTGATGTATTTCCATATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAATTTGTTTATAAAGTGGATTACGTTGATGTATTTCCATATATT  400

seq1  GAACCAACCCTGCATCATAGGGATGGCGTCTATTTGATTGTGATGGATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAACCCTGCATCATAGGGATGGCGTCTATTTGATTGTGATGGATGA  450

seq1  TTGTTTTGATGTGGTCTTGGATTCAGTTTGTGAAAATTTTATTGAGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGATGTGGTCTTGGATTCAGTTTGTGAAAATTTTATTGAGTATT  500

seq1  TTTGCATCGATATTCATAAGGGAAATTAGTCTGAAGTTCTCTTTCTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATCGATATTCATAAGGGAAATTAGTCTGAAGTTCTCTTTCTTTGT  550

seq1  TGGGTCTTTGTGTCTACCTCACACCAGTCAGAATGGCTAAGGTAAAAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTTTGTGTCTACCTCACACCAGTCAGAATGGCTAAGGTAAAAAGC  600

seq1  TCAAGTGACAGCAGGTGATGGTGAGGATGTGGAGAAAGAGGAATACTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGACAGCAGGTGATGGTGAGGATGTGGAGAAAGAGGAATACTCCT  650

seq1  CCATTGCTG  659
      |||||||||
seq2  CCATTGCTG  659

seq1: chr15_24517040_24518021
seq2: B6Ng01-058M16.g_68_1032 (reverse)

seq1  ACCCTATAGGTGGAAGAACATTATGAACTAACCAGTACCCCGGAGCTCTT  50
      |||||||| |||  || ||| |||||||||| ||||||||| |||||| |
seq2  ACCCTATA-GTG--AG-ACA-TATGAACTAA-CAGTACCCC-GAGCTC-T  42

seq1  GACTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCACTGCA  100
      |||||||||||||||| |||||| |||| |||||| ||||||||||||||
seq2  GACTCTAGCTGCATAT-TATCAG-AGAT-GCCTAG-TGGCCATCACTGCA  88

seq1  AAGAGAGGCCCATTGGACTTGCAAACTGTATATGCCCCAGAACAGGGGAA  150
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAG--CCATTGGACTTGCAAACTGTATATGCCCCAGAACAGGGGAA  136

seq1  CGCCAGGGCCAAAAAAAAAATGGGAATGAGTGGGTAGGGAAGTAGTGGGG  200
      |||||||||| |||||||||||||||||||| ||||||||||||||||||
seq2  CGCCAGGGCC-AAAAAAAAATGGGAATGAGT-GGTAGGGAAGTAGTGGGG  184

seq1  AGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGAGGAAAAT  250
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGGGTATGGGGGAC-TTTGGGATAGCATTGGAAATGTAATTGAGGAAAAT  233

seq1  ATGTAATAAAAAAACAATCTTTTTTATTTTACAAAAGCAAAATTTCCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATAAAAAAACAATCTTTTTTATTTTACAAAAGCAAAATTTCCCCA  283

seq1  TCAGTAATAAAATATGTGTACATCTATAATCAGACTTGTATTCAGCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAATAAAATATGTGTACATCTATAATCAGACTTGTATTCAGCCACA  333

seq1  TAATCTCAGGATTTCTTTTTTTTTCTTTTGACTTTCCAAAATTTACAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTCAGGATTTCTTTTTTTTTCTTTTGACTTTCCAAAATTTACAACT  383

seq1  GATTATGTAAATTTCAACTAAAATATAATTATCCATGTCCATTATGCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGTAAATTTCAACTAAAATATAATTATCCATGTCCATTATGCAAT  433

seq1  CTGTTGCTCTGTATCTCCCTTGTCCCTCCCTCCTTCCCTCTCACCCTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCTCTGTATCTCCCTTGTCCCTCCCTCCTTCCCTCTCACCCTCCA  483

seq1  AATATGTGTGTGGGTGTGTGGATATAGATATAGATATGGATATAGATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTGTGTGGGTGTGTGGATATAGATATAGATATGGATATAGATATA  533

seq1  GATATAGATATGGATATAGATAGATAGAGATAGAGATAGAGATAGAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGATATGGATATAGATAGATAGAGATAGAGATAGAGATAGAGATA  583

seq1  GAGATAGAGATAGAGATAGAGATAGAGATAGAGATAGAGATAGAGATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGAGATAGAGATAGAGATAGAGATAGAGATAGAGATAGAGATAGA  633

seq1  GATAGAGATAGATGTGTGTGTGTATATATATGTGTGTGTGTGTTTGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAGATAGATGTGTGTGTGTATATATATGTGTGTGTGTGTTTGTTTG  683

seq1  TGTGTATGTGTGTGTGGGGGGGTGGGTAGACTTAAATTCATATTTTGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGTGTGTGTGGGGGGGTGGGTAGACTTAAATTCATATTTTGGTC  733

seq1  ATATAAATGCAGAAGTTAAAAAATAACAATATGACAAATATTACAAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATGCAGAAGTTAAAAAATAACAATATGACAAATATTACAAATAT  783

seq1  TCCTATTGCTTCAAACATATTTTGTCAGGAAGTACCAGAAGGAAGTTGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTGCTTCAAACATATTTTGTCAGGAAGTACCAGAAGGAAGTTGAC  833

seq1  GATATTGTACAAAGCCCCCCTGGATTAGGATGAAGATTCGGAATTCTTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGTACAAAGCCCCCCTGGATTAGGATGAAGATTCGGAATTCTTAC  883

seq1  AAATGACTGAAAGTGGATGTGCATGACACAGTAGATCACAGCAGATCAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACTGAAAGTGGATGTGCATGACACAGTAGATCACAGCAGATCAAT  933

seq1  GATGACAGACAGATAGAAAGTCCAAAGAATTC  982
      ||||||||||||||||||||||||||||||||
seq2  GATGACAGACAGATAGAAAGTCCAAAGAATTC  965