BAC Information

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BAC

Clone NameB6Ng01-059D06
Chromosome15 (Build37)
Map Location 35,946,490 - 36,103,980
singlet/doubletdoublet
Overlap geneRgs22, Fbxo43, 1700074I03Rik, Polr2k
Upstream geneStk3, Osr2, Vps13b, EG666183, Cox6c
Downstream geneSpag1, Rnf19, LOC670773, EG268795, EG545101, Ankrd46, 4631426E05Rik, Pabpc1, LOC626746, Ywhaz, Zfp706, LOC670911
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059D06.bB6Ng01-059D06.g
ACCDH880551DH880552
length1,040906
definitionDH880551|Mus musculus domesticus DNA, BAC clone: B6Ng01-059D06, 5' end.DH880552|Mus musculus domesticus DNA, BAC clone: B6Ng01-059D06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,946,490 - 35,947,539)(36,103,070 - 36,103,980)
sequence
gaattctgtagcttccttggaagcatggatataaaatttggagagccatg
tcaaaggatgccttagtagacaaagcattaaacggattctaaatgacatc
attacacccatggctcattgcagctctcgcaactccacatcagagaggct
tctaattgcaacagatggtgctcaacacagagcctcacaactgtccaagg
tgcagagaggaagaaattatgaaatgctctatgaaactaaatggagcata
cataccacaccccctcctacaaaggctcgggaatcgtttgcagaagaggg
aggggaggggatgtaagagccacaggcactggattattgcaaggatactg
tcttccagacagagcagagcagtggtgacagcacgcacaatgtccgtgca
agcccaagccagacaaaattcaggcatggagatgggagtcggacacacag
tcccatccctaaaggtggagctactggcaactgttagcactgggagaggg
agggaggaagagcctaagaaggtagcccctgataggttggtcatacttcg
gcagaaagctacgcatctaagattatttgggtagcacaaatttggtcttg
atgggtgaaataaaaaaaaaaaaaaaggaaaaaagaagaaaaggcacaaa
gatgggtgggtaggctggatctgaaaagagttaagcgggcctgtgtacaa
gacaaaagcacattgtgtgaaactcttgaatatcaattgatagaggatta
gatattagatagatagataggtagatagatgacagatagatagatgatag
atacaatgtataccatagtctcttcaacttgaatgccgtcttctttagtt
ggcatctattaaccctatttctcagttatctctgtaaaactcgaggcatt
ctcagcttaaaaatgtgcatggcatacatcagccttcttctaaacgttac
tttatcaggacccatgtttccagggaaggtatgaaaatgttatatccccc
aagtacaattgagatttaagtcaaaataaataatatacat
gaattctcctacctctgcttccaagcgctcaaatggcaggagtgtgctac
ctctcccggctgcccacaaagattttaaagccaagtgtctctcctggttt
tgccacaaatttacttccaaaatcatcagccggagactccctacctccac
agctggaagaagcgtcccttctctgagcacgcaaaagctttttccggcgc
tgcctcgccaacttccggcgccgatttatgacgaaacgaagccccgcccc
ctctccctcgcagtgcggggggactggcgcttctgtttctgaggcaggtt
acagcgtttttctcctacctgcttcctgtggggttttgttttgtttttat
ttgcccttctctctggggtagcaaaacatctccacagctcggcattcgaa
ggtttgtgcttgtgtaatggcagatacaggaggaacccaagacaggcaat
gctggagtcttaaccgacccgatgcttaggcgaacaccagcaggctaccc
taccaatacttcacgatttgacacttcgcacatggcggttttcaaattgt
tcaatgcccgtgtgggttttttgtttgcttgtttgtttgttttcaatttc
cagttctctcctagtttcctgtcacctctcttttttatgttggggagtgg
aaagagagggaaaggggaagcccaggctgagactgctcttaaacccgtac
aatcctctgtcttctccgcctcaatgctgagattaatcgcgcaaatcaca
acgcctgccatctccttccctttttgaagccaagctttcttacggcagct
ccatcaattactccgacaagttggtggctttagcttttctcttagtactc
tctttctgtgttgacaatttagtgagtacaggtgtgtgttctcacacatc
aaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_35946490_35947539
seq2: B6Ng01-059D06.b_46_1085

seq1  GAATTCTGTAGCTTCCTTGGAAGCATGGATATAAAATTTGGAGAGCCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGCTTCCTTGGAAGCATGGATATAAAATTTGGAGAGCCATG  50

seq1  TCAAAGGATGCCTTAGTAGACAAAGCATTAAACGGATTCTAAATGACATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGATGCCTTAGTAGACAAAGCATTAAACGGATTCTAAATGACATC  100

seq1  ATTACACCCATGGCTCATTGCAGCTCTCGCAACTCCACATCAGAGAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACCCATGGCTCATTGCAGCTCTCGCAACTCCACATCAGAGAGGCT  150

seq1  TCTAATTGCAACAGATGGTGCTCAACACAGAGCCTCACAACTGTCCAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTGCAACAGATGGTGCTCAACACAGAGCCTCACAACTGTCCAAGG  200

seq1  TGCAGAGAGGAAGAAATTATGAAATGCTCTATGAAACTAAATGGAGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGAGGAAGAAATTATGAAATGCTCTATGAAACTAAATGGAGCATA  250

seq1  CATACCACACCCCCTCCTACAAAGGCTCGGGAATCGTTTGCAGAAGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCACACCCCCTCCTACAAAGGCTCGGGAATCGTTTGCAGAAGAGGG  300

seq1  AGGGGAGGGGATGTAAGAGCCACAGGCACTGGATTATTGCAAGGATACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGGGGATGTAAGAGCCACAGGCACTGGATTATTGCAAGGATACTG  350

seq1  TCTTCCAGACAGAGCAGAGCAGTGGTGACAGCACGCACAATGTCCGTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAGACAGAGCAGAGCAGTGGTGACAGCACGCACAATGTCCGTGCA  400

seq1  AGCCCAAGCCAGACAAAATTCAGGCATGGAGATGGGAGTCGGACACACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAAGCCAGACAAAATTCAGGCATGGAGATGGGAGTCGGACACACAG  450

seq1  TCCCATCCCTAAAGGTGGAGCTACTGGCAACTGTTAGCACTGGGAGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCCCTAAAGGTGGAGCTACTGGCAACTGTTAGCACTGGGAGAGGG  500

seq1  AGGGAGGAAGAGCCTAAGAAGGTAGCCCCTGATAGGTTGGTCATACTTCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGAAGAGCCTAAGAAGGTAGCCCCTGATAGGTTGGTCATACTTCG  550

seq1  GCAGAAAGCTACGCATCTAAGATTATTTGGGTAGCACAAATTTGGTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGCTACGCATCTAAGATTATTTGGGTAGCACAAATTTGGTCTTG  600

seq1  ATGGGTGAAATAAAAAAAAAAAAAAAGGAAAAAAGAAGAAAAGGCACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGAAATAAAAAAAAAAAAAAAGGAAAAAAGAAGAAAAGGCACAAA  650

seq1  GATGGGTGGGTAGGCTGGATCTGAAAAGAGTTAAGCGGGCCTGTGTACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTGGGTAGGCTGGATCTGAAAAGAGTTAAGCGGGCCTGTGTACAA  700

seq1  GACAAAAGCACATTGTGTGAAACTCTTGAATATCAATTGATAGAGGATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAGCACATTGTGTGAAACTCTTGAATATCAATTGATAGAGGATTA  750

seq1  GATATTAGATAGATAGATAGGTAGATAGATGACAGATAGATAGATGATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAGATAGATAGATAGGTAGATAGATGACAGATAGATAGATGATAG  800

seq1  ATACAATGTATACCATAAGTCTCTTCAACTTGAATGCCTGTCTTCTTTTA  850
      |||||||||||||||| ||||||||||||||||||||| |||||| ||||
seq2  ATACAATGTATACCAT-AGTCTCTTCAACTTGAATGCC-GTCTTC-TTTA  847

seq1  GTTGGCATCTATTAACCCTATTTCTCAGTTATCTCTGTAAAACTCGAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCATCTATTAACCCTATTTCTCAGTTATCTCTGTAAAACTCGAGGC  897

seq1  ATTCTCAGCTTAAAAATGTGCATGCCATACATCAGCCTTTCTTCTAAACG  950
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  ATTCTCAGCTTAAAAATGTGCATGGCATACATCAGCC-TTCTTCTAAACG  946

seq1  TTACCTTATCAGGACCCATGTTTTCAATGGAAGGTATGAAAATGTTATAA  1000
      |||| ||||||||||||||| |||| | |||||||||||||||||||| |
seq2  TTACTTTATCAGGACCCATG-TTTCCAGGGAAGGTATGAAAATGTTAT-A  994

seq1  TCCCCCAAGTAGCAATTGAGATTTGAGTCTAATATTAAATTAATATACAT  1050
      ||||||||||| |||||||||||| |||| || ||  || ||||||||||
seq2  TCCCCCAAGTA-CAATTGAGATTTAAGTC-AAAAT--AAATAATATACAT  1040

seq1: chr15_36103070_36103980
seq2: B6Ng01-059D06.g_70_975 (reverse)

seq1  AATTTTGATGTGTGAGAACACACACCTGTACTCTACTGAACTGGTCAAAC  50
      ||||||||||||||||||||||||||||||||| ||| || | ||| |||
seq2  AATTTTGATGTGTGAGAACACACACCTGTACTC-ACT-AAATTGTC-AAC  47

seq1  ACAGGAAGGAGAGTACTAAGAGAAAAGCTAAAGCCACCAACTAGTCGAAG  100
      ||| ||| |||||||||||||||||||||||||||||||||| |||| ||
seq2  ACA-GAAAGAGAGTACTAAGAGAAAAGCTAAAGCCACCAACTTGTCGGAG  96

seq1  TAATTGATGGAGCTGCCGTAAGAAAGCCTTGGCTTCAAAAAGGGAGGGAG  150
      |||||||||||||||||||||||||| |||||||||||||||||| ||||
seq2  TAATTGATGGAGCTGCCGTAAGAAAG-CTTGGCTTCAAAAAGGGAAGGAG  145

seq1  ATGGCAGGCGTTGTGATTTGCGCGATTAATCTCAGCATTGAGGCGGCGAA  200
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGGCAGGCGTTGTGATTTGCGCGATTAATCTCAGCATTGAGGCGGAGAA  195

seq1  GACAGAGGATTGTACGGGTTTAAGAGCAGTCTCAGCCTGGGCTTCCCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGATTGTACGGGTTTAAGAGCAGTCTCAGCCTGGGCTTCCCCTT  245

seq1  TCCCTCTCTTTCCACTCCCCAACATAAAAAAGAGAGGTGACAGGAAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCTTTCCACTCCCCAACATAAAAAAGAGAGGTGACAGGAAACTA  295

seq1  GGAGAGAACTGGAAATTGAAAACAAACAAACAAGCAAACAAAAAACCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAACTGGAAATTGAAAACAAACAAACAAGCAAACAAAAAACCCAC  345

seq1  ACGGGCATTGAACAATTTGAAAACCGCCATGTGCGAAGTGTCAAATCGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGCATTGAACAATTTGAAAACCGCCATGTGCGAAGTGTCAAATCGTG  395

seq1  AAGTATTGGTAGGGTAGCCTGCTGGTGTTCGCCTAAGCATCGGGTCGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTGGTAGGGTAGCCTGCTGGTGTTCGCCTAAGCATCGGGTCGGTT  445

seq1  AAGACTCCAGCATTGCCTGTCTTGGGTTCCTCCTGTATCTGCCATTACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCCAGCATTGCCTGTCTTGGGTTCCTCCTGTATCTGCCATTACAC  495

seq1  AAGCACAAACCTTCGAATGCCGAGCTGTGGAGATGTTTTGCTACCCCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAAACCTTCGAATGCCGAGCTGTGGAGATGTTTTGCTACCCCAGA  545

seq1  GAGAAGGGCAAATAAAAACAAAACAAAACCCCACAGGAAGCAGGTAGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGGCAAATAAAAACAAAACAAAACCCCACAGGAAGCAGGTAGGAG  595

seq1  AAAAACGCTGTAACCTGCCTCAGAAACAGAAGCGCCAGTCCCCCCGCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACGCTGTAACCTGCCTCAGAAACAGAAGCGCCAGTCCCCCCGCACT  645

seq1  GCGAGGGAGAGGGGGCGGGGCTTCGTTTCGTCATAAATCGGCGCCGGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGGGAGAGGGGGCGGGGCTTCGTTTCGTCATAAATCGGCGCCGGAAG  695

seq1  TTGGCGAGGCAGCGCCGGAAAAAGCTTTTGCGTGCTCAGAGAAGGGACGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCGAGGCAGCGCCGGAAAAAGCTTTTGCGTGCTCAGAGAAGGGACGC  745

seq1  TTCTTCCAGCTGTGGAGGTAGGGAGTCTCCGGCTGATGATTTTGGAAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCAGCTGTGGAGGTAGGGAGTCTCCGGCTGATGATTTTGGAAGTA  795

seq1  AATTTGTGGCAAAACCAGGAGAGACACTTGGCTTTAAAATCTTTGTGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTGGCAAAACCAGGAGAGACACTTGGCTTTAAAATCTTTGTGGGC  845

seq1  AGCCGGGAGAGGTAGCACACTCCTGCCATTTGAGCGCTTGGAAGCAGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGGAGAGGTAGCACACTCCTGCCATTTGAGCGCTTGGAAGCAGAGG  895

seq1  TAGGAGAATTC  911
      |||||||||||
seq2  TAGGAGAATTC  906