BAC Information

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BAC

Clone NameB6Ng01-059K14
Chromosome15 (Build37)
Map Location 20,112,909 - 20,114,025
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666875, LOC621884, LOC100040265
Downstream geneAcot10, LOC100040302, Cdh12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059K14.bB6Ng01-059K14.g
ACCDH880871DH880872
length1,1011,157
definitionDH880871|Mus musculus domesticus DNA, BAC clone: B6Ng01-059K14, 5' end.DH880872|Mus musculus domesticus DNA, BAC clone: B6Ng01-059K14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaaaggctatgatttgggtaatattctttaactggatattatt
ttacttactgagctcagtgttatgttaacaagtggaaccctctcaaatcc
taccctacccatctcttcatttggctattcctggtgagtatatttttcct
gctttaaacctggctgagagtatgagggctctcattgtgtctgatgagtc
attataatgaatcattgagtgggaaggagcccatggggaccaataaattg
gtatccaactagcctgaggtgaaggacacattaggaactcccaccaaaat
tatagctggcatctaacctgagaattgttttgtgggtaacatttttttca
ttctatgcagttattctagctcatttacaaatagatatttccagggtata
gaatttaataacctaccaagtgtctgggtgtagatgcaaactcgttgcca
ggttggatgaagtatgaagaaaatcagaagtagtttcccatagtaggaat
cataagaaattcctagactaacaaaattgactgaaaaaactttgagtgcc
acaacagatgctagaaatcagaaaatacaaatgtctgtagacattctaga
gtgggtgtctatgtgagtgttccaagactattaagtattttagttttatg
gtaagcccagcaagtacacaatttattaatgccattattagaattttgta
gtgttttatcgtaattattaagttcttcaatatcattaccaccaaaagaa
aaaccagatagtcatgcttttatatcccctttagaaacaattatgtgtag
gatctaggatgaatctcaaggatctttatgtaatatatttgttctttcaa
aatattttgctagtcccagcacttatgagggcaaatatggggagtctagg
tcatcatggctttagctccaacaaaaggaaaaaacactgatatttaccac
tactaatatagaaaccagttttctttggatagatctattaataagaccaa
atcatagcatttccagtctttttttaaatataccattcagtggtacccag
gcttttatggttattgtttattgctgtgacaagatccatgaccagaaact
t
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacacaagtcagaatggttaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggaggaagaggaacactcctctattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctgttggttcctca
gaaaattggacatagtactaccagaggatcctgcaatacctctcctgggc
atatacccagaacatatcaaaaccagtaagacagacacatgctccactat
gttcataacagccttatttatgatagccagaagctagaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtatatttacacactg
gattactactcagctatcaaaaagaatgaatttatgaaattcctaggcaa
atggatggacttggagggcatcatcctgaggcgggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttaggataaccaagatataagacagaatttgctaaacgcatgaaactcaa
gaagaatgaagaccatagtgtggacactttgccccttcttagaattggga
acaaaacacccatttaaggagttacacagataaagtttggagctgtgagg
aaaggatggaccatctagagactgccatatccagggaatcatcccataat
cagcttccaaaggctgacaccattgcatacactagcaagattttgctgaa
aggacccagatatagatgtctcttgtgagactttgccggggtctagcaac
acagaagtggatgctcacagtcagctattggatggatcacagggcctcca
atggaggagctagagaagtactcagagcttaagggatcttgcaccctata
ggtggaacacaatatgactaccagtccccggagctcttgtctctagctgc
atatgtacaaatgctagtccgcttaccttggaaagagccatggaccgcaa
cttaattgctcagtctggaacgctgggctaaaatggatgggtggtagaag
tgggcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_20112909_20114025
seq2: B6Ng01-059K14.b_50_1150

seq1  GAATTCCAAAAGGCTATGATTTGGGTAATATTCTTTAACTGGATATTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAAGGCTATGATTTGGGTAATATTCTTTAACTGGATATTATT  50

seq1  TTACTTACTGAGCTCAGTGTTATGTTAACAAGTGGAACCCTCTCAAATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTACTGAGCTCAGTGTTATGTTAACAAGTGGAACCCTCTCAAATCC  100

seq1  TACCCTACCCATCTCTTCATTTGGCTATTCCTGGTGAGTATATTTTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTACCCATCTCTTCATTTGGCTATTCCTGGTGAGTATATTTTTCCT  150

seq1  GCTTTAAACCTGGCTGAGAGTATGAGGGCTCTCATTGTGTCTGATGAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAACCTGGCTGAGAGTATGAGGGCTCTCATTGTGTCTGATGAGTC  200

seq1  ATTATAATGAATCATTGAGTGGGAAGGAGCCCATGGGGACCAATAAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATGAATCATTGAGTGGGAAGGAGCCCATGGGGACCAATAAATTG  250

seq1  GTATCCAACTAGCCTGAGGTGAAGGACACATTAGGAACTCCCACCAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCAACTAGCCTGAGGTGAAGGACACATTAGGAACTCCCACCAAAAT  300

seq1  TATAGCTGGCATCTAACCTGAGAATTGTTTTGTGGGTAACATTTTTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTGGCATCTAACCTGAGAATTGTTTTGTGGGTAACATTTTTTTCA  350

seq1  TTCTATGCAGTTATTCTAGCTCATTTACAAATAGATATTTCCAGGGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGCAGTTATTCTAGCTCATTTACAAATAGATATTTCCAGGGTATA  400

seq1  GAATTTAATAACCTACCAAGTGTCTGGGTGTAGATGCAAACTCGTTGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAATAACCTACCAAGTGTCTGGGTGTAGATGCAAACTCGTTGCCA  450

seq1  GGTTGGATGAAGTATGAAGAAAATCAGAAGTAGTTTCCCATAGTAGGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGATGAAGTATGAAGAAAATCAGAAGTAGTTTCCCATAGTAGGAAT  500

seq1  CATAAGAAATTCCTAGACTAACAAAATTGACTGAAAAAACTTTGAGTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGAAATTCCTAGACTAACAAAATTGACTGAAAAAACTTTGAGTGCC  550

seq1  ACAACAGATGCTAGAAATCAGAAAATACAAATGTCTGTAGACATTCTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGATGCTAGAAATCAGAAAATACAAATGTCTGTAGACATTCTAGA  600

seq1  GTGGGTGTCTATGTGAGTGTTCCAAGACTATTAAGTATTTTAGTTTTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGTCTATGTGAGTGTTCCAAGACTATTAAGTATTTTAGTTTTATG  650

seq1  GTAAGCCCAGCAAGTACACAATTTATTAATGCCATTATTAGAATTTTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCCCAGCAAGTACACAATTTATTAATGCCATTATTAGAATTTTGTA  700

seq1  GTGTTTTATCGTAATTATTAAGTTCTTCAATATCATTACCACCAAAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTATCGTAATTATTAAGTTCTTCAATATCATTACCACCAAAAGAA  750

seq1  AAACCAGATAGTCATGC-TTTATATCCCCTTTAGAAACAATTATGTGTAG  799
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAACCAGATAGTCATGCTTTTATATCCCCTTTAGAAACAATTATGTGTAG  800

seq1  GATCTAGGATGAATCTCAAGGATCTTTATGTAATATATTTGTTCTTTCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAGGATGAATCTCAAGGATCTTTATGTAATATATTTGTTCTTTCAA  850

seq1  AATATTTTGCTAGTCCCAGCACTTATGAGGGCAAAATAATGGGGAGTCTA  899
      |||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  AATATTTTGCTAGTCCCAGCACTTATGAGGGCAAA--TATGGGGAGTCTA  898

seq1  GGTCATCATGGCTTTTAGCTCCAAACAAAAGGAAAAAAACACTGAATATA  949
      |||||||||||| ||||||||| ||||||||| ||||||||||| |||| 
seq2  GGTCATCATGGC-TTTAGCTCC-AACAAAAGG-AAAAAACACTG-ATATT  944

seq1  TA-CACTAACTAATATAGAAACCAGTTTTCCTTTGGATAAGATCTA-TAA  997
      || |||| ||||||||||||||||||||| |||||||| ||||||| |||
seq2  TACCACT-ACTAATATAGAAACCAGTTTT-CTTTGGAT-AGATCTATTAA  991

seq1  TAAGACAAAATCATAGCATTTCCAGGTCTTTTTTTACATATACCAATTCA  1047
      |||||| ||||||||||||||||| ||||||||||| ||||||| |||||
seq2  TAAGACCAAATCATAGCATTTCCA-GTCTTTTTTTAAATATACC-ATTCA  1039

seq1  GTGGTACCCAGGGCTTTTTAATGTGTTATTGTTTTATTGCTGTGACAAGA  1097
      |||||||||| |||||||  ||| ||||||| ||||||||||||||||||
seq2  GTGGTACCCA-GGCTTTT--ATG-GTTATTG-TTTATTGCTGTGACAAGA  1084

seq1  TACCATGACCAAGGAAACTT  1117
      | |||||||||  |||||||
seq2  T-CCATGACCA--GAAACTT  1101