BAC Information

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BAC

Clone NameB6Ng01-060D19
Chromosome15 (Build37)
Map Location 64,913,478 - 65,089,176
singlet/doubletdoublet
Overlap geneLOC100040790, LOC665836
Upstream geneDdef1, Adcy8, LOC268812
Downstream geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060D19.bB6Ng01-060D19.g
ACCDH881269DH881270
length1,057941
definitionDH881269|Mus musculus domesticus DNA, BAC clone: B6Ng01-060D19, 5' end.DH881270|Mus musculus domesticus DNA, BAC clone: B6Ng01-060D19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,913,478 - 64,914,548)(65,088,614 - 65,089,176)
sequence
gaattctgccagttatgctgtgccaatactatcaatgccctcctgtttcc
attttatcaaagatggaatcaaagttctcagagtcttaaaatgtacttga
gcctcagagttagtgaaatattgagtcaactggttacctgacttttaacc
acacactaagcagatcatagggaagactatgaacattttaaatgagtgct
aaactctagtttataattactccagtaatacatgttccacagatggatat
tagccacttagatagattaaaaacaaagtcaggaatcagccctagaatcc
tgagagttattacaaagacttgaaaaatccattgactggaatattggtcc
aatgaccagcgcctgtgtcattttgggtcatttatttaaacacaccacac
cacatcttctttactggtaagtgagatggtgatactcccttcctgcataa
gaggaagaacttaataaattaatggaaacaaagagactgacataggggcc
tgctaagtagatattctattaatgttattctgtgccctgttttaatgtgc
tctcatatatcagtggtaaagaagtgtctaggaacaaatccaaattacag
caactagtcatgggaaggaaaagagagaaaatgaaagtgattttttggaa
cgtaggtaagccaaaggtgacaggctttttcacttaagaagttaaaagtc
actgtaaacctatactaataggaaaagaaaatcatgctgagtttcctagg
aaataaaggtcacatggttttaattggccatttatttgtggctctgattt
ctggactctcactatgtggcctgctcctttatactacaagtctgagttat
gaaatatcatgattcagttaggaaaattgaatggtgatctttcattggaa
tagttttagagagcaggcatttttcttattttgttatgttgtgtgtttgg
tatggttgtgtggctgtgtggatatatctgccactatgtatgcacattgg
tctagagtggcattccttgtctcagggttcggagtgtgggatatatgtgt
tcatcat
gaattccagataaattgtgtttctagatattgggatctgatgcttagaaa
tggagaataagggattcacaagatgaaaaaagtcagatgttccacaagtt
ctgcttagcctcctggaaattggagcacagagcaaggggacctagcaggt
agtctgctgcatatttggggattaaactcaggggttggacttggagaaat
gaagtgagaggtgaagatttgcagcaaacttacctgcttctctggatgga
gtgatctgtggtttgccaatgaatgcctttttgagtggaacttggataaa
gcaaagagtagttaaagggaatttagaaggggaagacctgtgtgttccac
ttgagatgggatagcaacaggggttctttttcagagctagagataagact
gaaggattagatttggagaagaggagcggcagatgaagatctgcagttaa
ctggtttacctgtttccctgaccagagtgtcctgttggtttgcagggaat
gcctgctggagttgggagctgggataaagcaaggaatggttagaaaggaa
gtgagaaggagaagatctgtgtaattgactggaggtgaggacagagagga
atgacagaccacagaaagtggtccactatagagctggaggtgagactggg
agttgaacttacagtagctgaggaagagtttaatatctgtagtcagtcta
cctttgttctgggctagagtggtctgtgagttcccaggaaatgcctcctg
gatctgggggctccttttgtctgttttatcagaggataattatgatatga
tttatgatatgatacattgtcatataatgtataccatggcatgtaaatgt
ggcagtctcttcttagggaaaagtttctggtttggagtcatcaagtgcta
tgaggattctgttccacttcttaatacatctgacctttgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_64913478_64914548
seq2: B6Ng01-060D19.b_42_1098

seq1  GAATTCTGCCAGTTATGCTGTGCCAATACTATCAATGCCCTCCTGTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCAGTTATGCTGTGCCAATACTATCAATGCCCTCCTGTTTCC  50

seq1  ATTTTATCAAAGATGGAATCAAAGTTCTCAGAGTCTTAAAATGTACTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATCAAAGATGGAATCAAAGTTCTCAGAGTCTTAAAATGTACTTGA  100

seq1  GCCTCAGAGTTAGTGAAATATTGAGTCAACTGGTTACCTGACTTTTAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGAGTTAGTGAAATATTGAGTCAACTGGTTACCTGACTTTTAACC  150

seq1  ACACACTAAGCAGATCATAGGGAAGACTATGAACATTTTAAATGAGTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTAAGCAGATCATAGGGAAGACTATGAACATTTTAAATGAGTGCT  200

seq1  AAACTCTAGTTTATAATTACTCCAGTAATACATGTTCCACAGATGGATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTAGTTTATAATTACTCCAGTAATACATGTTCCACAGATGGATAT  250

seq1  TAGCCACTTAGATAGATTAAAAACAAAGTCAGGAATCAGCCCTAGAATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACTTAGATAGATTAAAAACAAAGTCAGGAATCAGCCCTAGAATCC  300

seq1  TGAGAGTTATTACAAAGACTTGAAAAATCCATTGACTGGAATATTGGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTTATTACAAAGACTTGAAAAATCCATTGACTGGAATATTGGTCC  350

seq1  AATGACCAGCGCCTGTGTCATTTTGGGTCATTTATTTAAACACACCACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCAGCGCCTGTGTCATTTTGGGTCATTTATTTAAACACACCACAC  400

seq1  CACATCTTCTTTACTGGTAAGTGAGATGGTGATACTCCCTTCCTGCATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTTCTTTACTGGTAAGTGAGATGGTGATACTCCCTTCCTGCATAA  450

seq1  GAGGAAGAACTTAATAAATTAATGGAAACAAAGAGACTGACATAGGGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGAACTTAATAAATTAATGGAAACAAAGAGACTGACATAGGGGCC  500

seq1  TGCTAAGTAGATATTCTATTAATGTTATTCTGTGCCCTGTTTTAATGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGTAGATATTCTATTAATGTTATTCTGTGCCCTGTTTTAATGTGC  550

seq1  TCTCATATATCAGTGGTAAAGAAGTGTCTAGGAACAAATCCAAATTACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATATATCAGTGGTAAAGAAGTGTCTAGGAACAAATCCAAATTACAG  600

seq1  CAACTAGTCATGGGAAGGAAAAGAGAGAAAATGAAAGTGATTTTTTGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGTCATGGGAAGGAAAAGAGAGAAAATGAAAGTGATTTTTTGGAA  650

seq1  CGTAGGTAAGCCAAAGGTGACAGGCTTTTTCACTTAAGAAGTTAAAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGGTAAGCCAAAGGTGACAGGCTTTTTCACTTAAGAAGTTAAAAGTC  700

seq1  ACTGTAAACCTATACTAATAGGAAAAGAAAATCATGCTGAGTTTCCTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAACCTATACTAATAGGAAAAGAAAATCATGCTGAGTTTCCTAGG  750

seq1  AAATAAAGGTCACATGGTTTTAATTGGCCATTTATTTGTGGCTCTGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGGTCACATGGTTTTAATTGGCCATTTATTTGTGGCTCTGATTT  800

seq1  CTGGACCCTCACTATGTGGCCTGC-CCTTTATACCACAAGTCTGAGTTAT  849
      |||||| ||||||||||||||||| ||||||||| |||||||||||||||
seq2  CTGGACTCTCACTATGTGGCCTGCTCCTTTATACTACAAGTCTGAGTTAT  850

seq1  GAAATATCATGATTCAGTTAGGAAAACTGAATGGTGACCTTTCATTGGAA  899
      |||||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  GAAATATCATGATTCAGTTAGGAAAATTGAATGGTGATCTTTCATTGGAA  900

seq1  TAGTTTTAGAGAGCAGGCATTTTTCTTATTTTTGTTATTGTTGTTGTGT-  948
      |||||||||||||||||||||||||||| ||||||||    |||||||| 
seq2  TAGTTTTAGAGAGCAGGCATTTTTCTTA-TTTTGTTA----TGTTGTGTG  945

seq1  TTTGTTATTGTTGTTGTGGCTGTGTGGACTATATCTGCCACTATGTAATG  998
      |||| ||| |||| |||||||||||||| ||||||||||||||||| |||
seq2  TTTGGTATGGTTG-TGTGGCTGTGTGGA-TATATCTGCCACTATGT-ATG  992

seq1  CACATTGGTCTAGAAGTGGCAATTCCCTTGTCTCAGGGTTCGGAGTGTTG  1048
      ||||||||||||| |||||||  | |||||||||||||||||||||| ||
seq2  CACATTGGTCTAG-AGTGGCA--TTCCTTGTCTCAGGGTTCGGAGTG-TG  1038

seq1  GGATTATATGTGTCCACCATCAT  1071
      ||| ||||||||| || |||   
seq2  GGA-TATATGTGTTCATCAT---  1057

seq1: chr15_65088614_65089176
seq2: B6Ng01-060D19.g_448_1006 (reverse)

seq1  TGCAAAGGTCAGATGATATAAGAAGTGGAACAGAATCCTCATAGCACTTG  50
      |||||||||||||||   ||||||||||||||||||||||||||||||||
seq2  TGCAAAGGTCAGATGTATTAAGAAGTGGAACAGAATCCTCATAGCACTTG  50

seq1  ATGACTCCAAACCCAGAAACCTTTCCCTTAGAAGAGACTGCCACCATTTT  100
      ||||||||||| |||||||| ||||||| |||||||||||||||   |||
seq2  ATGACTCCAAA-CCAGAAACTTTTCCCTAAGAAGAGACTGCCAC--ATTT  97

seq1  ACATGCCATGGTATACATTATATGACAATGTATCATATCATAAATCATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCATGGTATACATTATATGACAATGTATCATATCATAAATCATAT  147

seq1  CATAATTATCCTCTGATAAAAACAGACAAAAGGAGCCCCCAGATCCAGGA  200
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CATAATTATCCTCTGAT-AAAACAGACAAAAGGAGCCCCCAGATCCAGGA  196

seq1  GGCATTTCCTGGGAACTCACAGACCACTCTAGCCCAGAACAAAGGTAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTCCTGGGAACTCACAGACCACTCTAGCCCAGAACAAAGGTAGAC  246

seq1  TGACTACAGATATTAAACTCTTCCTCAGCTACTGTAAGTTCAACTCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTACAGATATTAAACTCTTCCTCAGCTACTGTAAGTTCAACTCCCAG  296

seq1  TCTCACCTCCAGCTCTATAGTGGACCACTTTCTGTGGTCTGTCATTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCTCCAGCTCTATAGTGGACCACTTTCTGTGGTCTGTCATTCCTC  346

seq1  TCTGTCCTCACCTCCAGTCAATTACACAGATCTTCTCCTTCTCACTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTCACCTCCAGTCAATTACACAGATCTTCTCCTTCTCACTTCCT  396

seq1  TTCTAACCATTCCTTGCTTTATCCCAGCTCCCAACTCCAGCAGGCATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACCATTCCTTGCTTTATCCCAGCTCCCAACTCCAGCAGGCATTCC  446

seq1  CTGCAAACCAACAGGACACTCTGGTCAGGGAAACAGGTAAACCAGTTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAACCAACAGGACACTCTGGTCAGGGAAACAGGTAAACCAGTTAAC  496

seq1  TGCAGATCTTCATCTGCCGCTCCTCTTCTCCAAATCTAATCCTTCAGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATCTTCATCTGCCGCTCCTCTTCTCCAAATCTAATCCTTCAGTCT  546

seq1  TATCTCTAGCTCT  563
      |||||||||||||
seq2  TATCTCTAGCTCT  559