BAC Information

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BAC

Clone NameB6Ng01-061D02
Chromosome15 (Build37)
Map Location 7,406,275 - 7,424,720
singlet/doubletdoublet
Overlap genenone
Upstream geneC9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik, Osmr, Lifr, Egflam
Downstream geneGdnf, Wdr70, LOC665556, LOC621001, Nup155, 2410089E03Rik, LOC100039599, Nipbl, EG666437
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061D02.bB6Ng01-061D02.g
ACCDH881939DH881940
length1,0181,020
definitionDH881939|Mus musculus domesticus DNA, BAC clone: B6Ng01-061D02, 5' end.DH881940|Mus musculus domesticus DNA, BAC clone: B6Ng01-061D02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,406,275 - 7,406,956)(7,423,695 - 7,424,720)
sequence
gaattcagctatcgcattagccctggtaaaagacaaaaaaagcctaaacg
gggagaaagaaaatcactgaccatgaaccaggcatttgctatacattatc
tcattgatatgtatatggtaatgtatatattaatatacatcatctcattg
aggtcagaaccaactttacaagaaatacatattaaatcgatccataccta
tctccttgtactaaggtcaaatctaagtggatcaaggaacttcacataaa
accagagacactgaaccttatagaggagaaagtggggaaaagccttgaag
atatgggcacaggggaaaaattcctgaacagaacagcaatggcttgtgct
gtaagatcgagaattgacaaatgggacctcatgaaactccaaagcttctg
caaggcaaaagacaccgtcaataagacaaaaagaccaccaacagattggg
aaaggatctttacctatcctaaatcagataggggactaatatccaacaat
atctaataaagaactcaagaaggtggacttcagaaaatcaaataacccca
ttaaaaaatggggctcagaactgaacaaagaattctcacctgaggaatac
cgaatggcagagaagcacctgaaaaaatgttcaacatccttaatcatcag
ggaaatgcaaatcaaaacaaccctgagattccacctcacaccagtcagaa
tggctaagatcaaaaattcaggtgacagcagatgctggcgaggatatgga
gaaagaggaacacttctccattgttggtgggattgcaggcttgtacaacc
actctggaaatcagtctggcggttcctcagaaaattggacataatactac
aggaggatcctgcaatatctctcctgggcctatatccagaagatgtccca
accggtaagaagaacacatgctccactatgttcatagcagccttgtttat
aatagccagaagctggaaagaacccagatgcccctcaacagagaatggat
acagaaaatgtggtacat
gaattcacagacacaaccaaaagtctataaattactcaagtaaaaccccc
agcggaatgggcaacagctgtgactgtttaagcagaaggacaaactgtgt
tctttcttgcatccaaatgatttctgtatcacaatttgtttatggtagtc
ctgcgttgggtcagaaaatgactaagctctctattgaattttctcattct
actgccattctgcttagcttccagaagacatctctgatgtgaagaactcc
cacacagacttgcagcatctcattcaggaaggcaagaattgataaagatg
atagagtggtccttgtgttcctttcaagttctagttgggtctctgcactt
ggacagctaataccccatgtctggcctttccttatctagctcctaagttc
cctctagcttaagtttggcacacatatgcctggtttcacctgctgcccta
ttttttaaaataaatcctggtaagggtgagtttcaggagatctgcactca
tatgggaccgattggtgacactagcaggtttgtgtggcaaaccttcttct
tatgagcaaatgtcctatgatatcatatgtatttggttgcttaatgtaag
gaaacctaggctagaagctgaatgttgaatatgagcttttgtgtcatttc
cttagggagtgtctgaatcacctctagcctaaatcatgtctctgatgtgg
acctcatgagcccaccctcaaccactcatggggcagttgcaggctctagt
gacagatgaagcagactttgctctgaaaatttataaaacgttctgtggat
acggaaaagtattagtatcaatcatgtgtacataggcgattgttcttgtg
aacaaaccttagcttcccaagtagattttggagtctagaaaaagaagtaa
gttgttgtggtgtctaacagtgccactgaggatgactgtgtgaatgatag
aagagagtctttgctaggatcagggttggaggaagttaggattgcttgat
gatacagcatatgtcttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_7406275_7406956
seq2: B6Ng01-061D02.b_45_726

seq1  GAATTCAGCTATCGCATTAGCCCTGGTAAAAGACAAAAAAAGCCTAAACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTATCGCATTAGCCCTGGTAAAAGACAAAAAAAGCCTAAACG  50

seq1  GGGAGAAAGAAAATCACTGACCATGAACCAGGCATTTGCTATACATTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAAGAAAATCACTGACCATGAACCAGGCATTTGCTATACATTATC  100

seq1  TCATTGATATGTATATGGTAATGTATATATTAATATACATCATCTCATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGATATGTATATGGTAATGTATATATTAATATACATCATCTCATTG  150

seq1  AGGTCAGAACCAACTTTACAAGAAATACATATTAAATCGATCCATACCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGAACCAACTTTACAAGAAATACATATTAAATCGATCCATACCTA  200

seq1  TCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAA  250

seq1  ACCAGAGACACTGAACCTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGACACTGAACCTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAG  300

seq1  ATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCT  350

seq1  GTAAGATCGAGAATTGACAAATGGGACCTCATGAAACTCCAAAGCTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATCGAGAATTGACAAATGGGACCTCATGAAACTCCAAAGCTTCTG  400

seq1  CAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGG  450

seq1  AAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACAAT  500

seq1  ATCTAATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCA  550

seq1  TTAAAAAATGGGGCTCAGAACTGAACAAAGAATTCTCACCTGAGGAATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATGGGGCTCAGAACTGAACAAAGAATTCTCACCTGAGGAATAC  600

seq1  CGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAG  650

seq1  GGAAATGCAAATCAAAACAACCCTGAGATTCC  682
      ||||||||||||||||||||||||||||||||
seq2  GGAAATGCAAATCAAAACAACCCTGAGATTCC  682

seq1: chr15_7423695_7424720
seq2: B6Ng01-061D02.g_67_1086 (reverse)

seq1  TTCAAGACATATGCTGTATCATCAAGCCAATTCCTAACCTCCCTCCAACC  50
      |||||||||||||||||||||||||||  | |||||| || ||||||| |
seq2  TTCAAGACATATGCTGTATCATCAAGC--AATCCTAA-CTTCCTCCAA-C  46

seq1  CCTGATCCTAGCAAAGACTCTCCTTCTATCATTCACACAGTCATCCTCAG  100
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCTGATCCTAGCAAAGACTCT-CTTCTATCATTCACACAGTCATCCTCAG  95

seq1  TGGCACTGTTAGACACCACAACAACTTACCTTCTTTTTCTAGACTCCAAA  150
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGGCACTGTTAGACACCACAACAACTTA-CTTCTTTTTCTAGACTCCAAA  144

seq1  ATCTACTTGGGAAGCTAAGGTTTGTTCACAAGAACAATCGCCTATGTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTTGGGAAGCTAAGGTTTGTTCACAAGAACAATCGCCTATGTACA  194

seq1  CATGATTGATACTAATACTTTTCCGTATCCACAGAACGTTTTATAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTGATACTAATACTTTTCCGTATCCACAGAACGTTTTATAAATTT  244

seq1  TCAGAGCAAAGTCTGCTTCATCTGTCACTAGAGCCTGCAACTGCCCCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCAAAGTCTGCTTCATCTGTCACTAGAGCCTGCAACTGCCCCATG  294

seq1  AGTGGTTGAGGGTGGGCTCATGAGGTCCACATCAGAGACATGATTTAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTGAGGGTGGGCTCATGAGGTCCACATCAGAGACATGATTTAGGC  344

seq1  TAGAGGTGATTCAGACACTCCCTAAGGAAATGACACAAAAGCTCATATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTGATTCAGACACTCCCTAAGGAAATGACACAAAAGCTCATATTC  394

seq1  AACATTCAGCTTCTAGCCTAGGTTTCCTTACATTAAGCAACCAAATACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCAGCTTCTAGCCTAGGTTTCCTTACATTAAGCAACCAAATACAT  444

seq1  ATGATATCATAGGACATTTGCTCATAAGAAGAAGGTTTGCCACACAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATCATAGGACATTTGCTCATAAGAAGAAGGTTTGCCACACAAACC  494

seq1  TGCTAGTGTCACCAATCGGTCCCATATGAGTGCAGATCTCCTGAAACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTGTCACCAATCGGTCCCATATGAGTGCAGATCTCCTGAAACTCA  544

seq1  CCCTTACCAGGATTTATTTTAAAAAATAGGGCAGCAGGTGAAACCAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTACCAGGATTTATTTTAAAAAATAGGGCAGCAGGTGAAACCAGGCA  594

seq1  TATGTGTGCCAAACTTAAGCTAGAGGGAACTTAGGAGCTAGATAAGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGCCAAACTTAAGCTAGAGGGAACTTAGGAGCTAGATAAGGAAA  644

seq1  GGCCAGACATGGGGTATTAGCTGTCCAAGTGCAGAGACCCAACTAGAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGACATGGGGTATTAGCTGTCCAAGTGCAGAGACCCAACTAGAACT  694

seq1  TGAAAGGAACACAAGGACCACTCTATCATCTTTATCAATTCTTGCCTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGAACACAAGGACCACTCTATCATCTTTATCAATTCTTGCCTTCC  744

seq1  TGAATGAGATGCTGCAAGTCTGTGTGGGAGTTCTTCACATCAGAGATGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAGATGCTGCAAGTCTGTGTGGGAGTTCTTCACATCAGAGATGTC  794

seq1  TTCTGGAAGCTAAGCAGAATGGCAGTAGAATGAGAAAATTCAATAGAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAAGCTAAGCAGAATGGCAGTAGAATGAGAAAATTCAATAGAGAG  844

seq1  CTTAGTCATTTTCTGACCCAACGCAGGACTACCATAAACAAATTGTGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCATTTTCTGACCCAACGCAGGACTACCATAAACAAATTGTGATA  894

seq1  CAGAAATCATTTGGATGCAAGAAAGAACACAGTTTGTCCTTCTGCTTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATCATTTGGATGCAAGAAAGAACACAGTTTGTCCTTCTGCTTAAA  944

seq1  CAGTCACAGCTGTTGCCCATTCCGCTGGGGGTTTTACTTGAGTAATTTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACAGCTGTTGCCCATTCCGCTGGGGGTTTTACTTGAGTAATTTAT  994

seq1  AGACTTTTGGTTGTGTCTGTGAATTC  1026
      ||||||||||||||||||||||||||
seq2  AGACTTTTGGTTGTGTCTGTGAATTC  1020