BAC Information

Click to search

BAC

Clone NameB6Ng01-062C05
Chromosome15 (Build37)
Map Location 5,703,528 - 5,704,049
singlet/doubletsinglet
Overlap genenone
Upstream geneC6, LOC100039214, 4930455B06Rik, C7, Card6, Rpl37, LOC100039281, Prkaa1, Ttc33, Ptger4, LOC100039322, LOC100039308, LOC666291
Downstream geneLOC666319, LOC100039358, LOC666323, Dab2, C9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062C05.bB6Ng01-062C05.g
ACCDH882624DH882625
length1,292520
definitionDH882624|Mus musculus domesticus DNA, BAC clone: B6Ng01-062C05, 5' end.DH882625|Mus musculus domesticus DNA, BAC clone: B6Ng01-062C05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgtaaaaccagagacactgaaacttatagaggagaaagtggg
caatagcctcaaagatatgggcacagggaacaaattcctgaatagaacaa
caatggattgtggtgtaggatcaaaaatcgacaaatgggacctcataaaa
ttgcaaagcttctgtaaggcaaaagacaccgtcagtaagacaaaaaggcc
accaacagattgggaaaggatctttaccaatcctaaatcagataagggac
taatatccaatatatataaagaactcaagaaggtagactccagaaaatga
aataaccccattaaaaaatggggctcagagctaaacaaagaattctcacc
tgaggaatacctaatggttgagaagcacctgaaaaaatgttcagcatcct
taatcatcagggaaatgcaaatcaaaacaaccctgagattccacctcaca
ccactcagaatggctaagatcaaaaattcaggcgacagcagatgctggtg
agaatgtggaaaaagaggaacactcctccatttttggtgggattgcaagc
ttgtacaaccactctggaaatcagtctggcggttcctttgaaaattggac
atagtactaccgaaggatccagcaatacctctcctgggcatatatccaga
agatgttccaactggtaagaaggacacatgctccactatgttcatagcag
ccttatttataatagccagaagctggagagaacccagatgtccctcaaca
gaagaatgaatacagaaaatgtggtacatttacacaatggagtactactc
agctattaaaaacaatgaatttatgaaattcgtaggcaaatggaagggcc
tggaaggtatcatcctgagtgaggtaacacattcacgaaagaactcactt
gatatgtactcactgatgagtggatattagcccagaaacagaatacccag
atacaagttgcaaaacacatgaaactcagaagacgagaccaaagtgtggt
cactttgcccttcttagatggggaacaaatagtcatggaaggagttacag
agacattgtttgggactgaaatgaagatggaccatctaaagactgcctgt
attcgcatcatcccacaatcagcctccaactcagataccactgcatatgc
agcaatatttttctgaaaggacctgagttaccagtcctttaaatatgcga
gtctgcaaacgatgagtctcagctcatgatgtacaaggccaatggagagc
taggaagatctcaggactaaggggtcgctaacccacatagtg
gaattcaattcacctttccacccaccataggggagcaaaaataggcttca
gggattgctaaccccctagaagacactggatctgtgaatacctaatcttc
aacgttccagcatgcaaaacttacagaaatacatttggttgcttgtaaga
taccttatatatatatatatatatatatgtacagcatttaattatgggag
catgaaaagactgaataagacctctagaatattatttcagttgagatttt
agttgagatgcaaaatctgtattttatatctcttaatttttattctacat
taacaaagagcattcatgtgagcttgtgggttcccatccctgactaagga
tttatacagaggtaatgcagactgggaaggaagagacttttcttcagtga
tgtagccatggattgtaaacaaagtctcaccaatgatccaaaaaagttct
agttaaaaactcattgaacctctgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_5703528_5704049
seq2: B6Ng01-062C05.g_68_587 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACACACACACACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACACACACAGA  50

seq1  GGTTCAATGAGTTTTTAACTAGAACTTTTTTGGATCATTGGTGAGACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAATGAGTTTTTAACTAGAACTTTTTTGGATCATTGGTGAGACTTT  100

seq1  GTTTACAATCCATGGCTACATCACTGAAGAAAAGTCTCTTCCTTCCCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAATCCATGGCTACATCACTGAAGAAAAGTCTCTTCCTTCCCAGT  150

seq1  CTGCATTACCTCTGTATAAATCCTTAGTCAGGGATGGGAACCCACAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTACCTCTGTATAAATCCTTAGTCAGGGATGGGAACCCACAAGCT  200

seq1  CACATGAATGCTCTTTGTTAATGTAGAATAAAAATTAAGAGATATAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAATGCTCTTTGTTAATGTAGAATAAAAATTAAGAGATATAAAAT  250

seq1  ACAGATTTTGCATCTCAACTAAAATCTCAACTGAAATAATATTCTAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTTTGCATCTCAACTAAAATCTCAACTGAAATAATATTCTAGAGG  300

seq1  TCTTATTCAGTCTTTTCATGCTCCCATAATTAAATGCTGTACATATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||  ||||||
seq2  TCTTATTCAGTCTTTTCATGCTCCCATAATTAAATGCTGTAC--ATATAT  348

seq1  ATATATATATATATATAAGGTATCTTACAAGCAACCAAATGTATTTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATAAGGTATCTTACAAGCAACCAAATGTATTTCTGT  398

seq1  AAGTTTTGCATGCTGGAACGTTGAAGATTAGGTATTCACAGATCCAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTGCATGCTGGAACGTTGAAGATTAGGTATTCACAGATCCAGTGT  448

seq1  CTTCTAGGGGGTTAGCAATCCCTGAAGCCTATTTTTGCTCCCCTATGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGGGGGTTAGCAATCCCTGAAGCCTATTTTTGCTCCCCTATGGTG  498

seq1  GGTGGAAAGGTGAATTGAATTC  522
      ||||||||||||||||||||||
seq2  GGTGGAAAGGTGAATTGAATTC  520