BAC Information

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BAC

Clone NameB6Ng01-062C19
Chromosome15 (Build37)
Map Location 22,231,157 - 22,232,367
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh12, LOC100040351
Downstream geneEG545091, Cdh18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062C19.bB6Ng01-062C19.g
ACCDH882652DH882653
length2351,203
definitionDH882652|Mus musculus domesticus DNA, BAC clone: B6Ng01-062C19, 5' end.DH882653|Mus musculus domesticus DNA, BAC clone: B6Ng01-062C19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttcccaacctcatctggactcaattgtagaggatatgcctat
ccctgcagatacttgatgccccagggtgctgggatacccagggaaggtcc
atcctctcagaggagaagggggggggggtggcgatatagtttgggaactc
tgtgaaggggagttttggatgggaagaacgaatcgggtgtgaaatgactt
cttttttttttgaatggtggacggtcactgacatt

gaattcagcatcactacttgtccttgatataaatccttatgcagcatgat
tactaaattagtgaataatccactacagacagtagatatggaagaacttc
aaggtcaatggaatgtacatagaatagctgcaagtagtttaaatgactta
ctactgagacacatttctgattctataaatatattggtaaatatttatta
catattaaatttatattagaagatagatctaataaaatttattttaaaac
agaatcttctactgaactcattcataaattgtgtatattgttagcatttt
cagtcatcaacttgacatgcatttttgcctccatggatctagtgttgtaa
atcgacacaaatcttttctatgtccatatattcatgctatgctctattag
aattatctgatgttcctatgatagcgcaggtccagtgaacttgaatcaga
catgttagtgtgtttctcatatcttactttaaggaaacattttaatttac
atacagatttccgactgaaaagaaatgatagtgtcattatcagaaccaca
ataattacaataaactttaaaatctgatgtcttctaccaaaactagcatt
gatataaagagaagaaattttcaaagcaattttagtaattatgtcaataa
acttaagtagctaaattactttttaatataactaattgtgaagttataga
gaattgagtctttagtttatctttccattatgaagcagtacattagagta
tatatgaatttcattttctcttttggtggcaacaggtagacttggagaaa
ttaaggtgacccaaaaatgtaaacaaattcattgcatccttacattttgt
tgccaagcctaacattaattagtccattagcaaaagctgtattatacaaa
actataatgagatataattatgtagctatatagttttcaaaactacccag
tgttgacatttctactgtcagattaaggctagtatctgaggccatgttta
taagggagctatattcagccagcaactggaactcagaaagagagatcgta
agatgttattttaaataaaaacattatagaacatttccgcttatcaacta
cattttaagacagaattaaaaaatggaagggagttgcagccttcgaaccc
tcattacttaggggaaatagttaccttggcattagttcagtttctcagga
aaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_22231157_22232367
seq2: B6Ng01-062C19.g_66_1268

seq1  GAATTCAGCATCACTACTTGTCCTTGATATAAATCCTTATGCAGCATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATCACTACTTGTCCTTGATATAAATCCTTATGCAGCATGAT  50

seq1  TACTAAATTAGTGAATAATCCACTACAGACAGTAGATATGGAAGAACTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAATTAGTGAATAATCCACTACAGACAGTAGATATGGAAGAACTTC  100

seq1  AAGGTCAATGGAATGTACATAGAATAGCTGCAAGTAGTTTAAATGACTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCAATGGAATGTACATAGAATAGCTGCAAGTAGTTTAAATGACTTA  150

seq1  CTACTGAGACACATTTCTGATTCTATAAATATATTGGTAAATATTTATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGAGACACATTTCTGATTCTATAAATATATTGGTAAATATTTATTA  200

seq1  CATATTAAATTTATATTAGAAGATAGATCTAATAAAATTTATTTTAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTAAATTTATATTAGAAGATAGATCTAATAAAATTTATTTTAAAAC  250

seq1  AGAATCTTCTACTGAACTCATTCATAAATTGTGTATATTGTTAGCATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTTCTACTGAACTCATTCATAAATTGTGTATATTGTTAGCATTTT  300

seq1  CAGTCATCAACTTGACATGCATTTTTGCCTCCATGGATCTAGTGTTGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATCAACTTGACATGCATTTTTGCCTCCATGGATCTAGTGTTGTAA  350

seq1  ATCGACACAAATCTTTTCTATGTCCATATATTCATGCTATGCTCTATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGACACAAATCTTTTCTATGTCCATATATTCATGCTATGCTCTATTAG  400

seq1  AATTATCTGATGTTCCTATGATAGCGCAGGTCCAGTGAACTTGAATCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTGATGTTCCTATGATAGCGCAGGTCCAGTGAACTTGAATCAGA  450

seq1  CATGTTAGTGTGTTTCTCATATCTTACTTTAAGGAAACATTTTAATTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTAGTGTGTTTCTCATATCTTACTTTAAGGAAACATTTTAATTTAC  500

seq1  ATACAGATTTCCGACTGAAAAGAAATGATAGTGTCATTATCAGAACCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGATTTCCGACTGAAAAGAAATGATAGTGTCATTATCAGAACCACA  550

seq1  ATAATTACAATAAACTTTAAAATCTGATGTCTTCTACCAAAACTAGCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTACAATAAACTTTAAAATCTGATGTCTTCTACCAAAACTAGCATT  600

seq1  GATATAAAGAGAAGAAATTTTCAAAGCAATTTTAGTAATTATGTCAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAAGAGAAGAAATTTTCAAAGCAATTTTAGTAATTATGTCAATAA  650

seq1  ACTTAAGTAGCTAAATTACTTTTTAATATAACTAATTGTGAAGTTATAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGTAGCTAAATTACTTTTTAATATAACTAATTGTGAAGTTATAGA  700

seq1  GAATTGAGTCTTTAGTTTATCTTTCCATTATGAAGCAGTACATTAGAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGAGTCTTTAGTTTATCTTTCCATTATGAAGCAGTACATTAGAGTA  750

seq1  TATATGAATTTCATTTTCTCTTTTGGTGGCAACAGGTAGACTTGGAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAATTTCATTTTCTCTTTTGGTGGCAACAGGTAGACTTGGAGAAA  800

seq1  TTAAGGTGACCCAAAAATGTAAACAAATTCATTGCATCCTTACATTTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTGACCCAAAAATGTAAACAAATTCATTGCATCCTTACATTTTGT  850

seq1  TGCCAAGCCTAACATTAATTAGTCCATTAGCAAAAGCTGTATTATACAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGCCTAACATTAATTAGTCCATTAGCAAAAGCTGTATTATACAAA  900

seq1  ACTATAATGAGATATAATTATGTAGCTATATAGTTTTCCAAAACTACCCA  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACTATAATGAGATATAATTATGTAGCTATATAGTTTT-CAAAACTACCCA  949

seq1  GTGTTGACATTTCTACTGTTCAGATTAAGGCTAGTATCTGAAGCCATGTT  1000
      |||||||||||||||||| |||||||||||||||||||||| ||||||||
seq2  GTGTTGACATTTCTACTG-TCAGATTAAGGCTAGTATCTGAGGCCATGTT  998

seq1  TAT-AGGGAGCTATATTCAGCCAGCAACTGAAACTCAGAAAGAGAGGATC  1049
      ||| |||||||||||||||||||||||||| |||||||||||||| ||||
seq2  TATAAGGGAGCTATATTCAGCCAGCAACTGGAACTCAGAAAGAGA-GATC  1047

seq1  GTAAGATGTAATTTTAAAATAAAAACATTAATAG-ACATAT-CGCATATA  1097
      ||||||||| ||||| ||||||||||||| |||| |||| | ||| ||| 
seq2  GTAAGATGTTATTTT-AAATAAAAACATT-ATAGAACATTTCCGCTTAT-  1094

seq1  CAACTACATTTTAAAGACAGATATAAAAAATGGAGGGAAGTTGCAGCCAT  1147
      |||||||||||| ||||||||  ||||||||||| || |||||||||| |
seq2  CAACTACATTTT-AAGACAGAATTAAAAAATGGAAGGGAGTTGCAGCCTT  1143

seq1  CCAGAACTCTCACTACTCAGGGGAATAGTGTTACC-TGACATCTAGTAGC  1196
      |  |||| |||| |||| ||||||| |  |||||| || ||| ||||  |
seq2  C--GAACCCTCATTACTTAGGGGAA-ATAGTTACCTTGGCAT-TAGT-TC  1188

seq1  AGTTTCTCAGGAAAA  1211
      |||||||||||||||
seq2  AGTTTCTCAGGAAAA  1203


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