BAC Information

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BAC

Clone NameB6Ng01-063J03
Chromosome15 (Build37)
Map Location 65,422,441 - 65,526,297
singlet/doubletdoublet
Overlap genenone
Upstream geneAdcy8, LOC268812, LOC100040790, LOC665836
Downstream geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1, Tg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063J03.bB6Ng01-063J03.g
ACCDH883621DH883622
length1,1271,085
definitionDH883621|Mus musculus domesticus DNA, BAC clone: B6Ng01-063J03, 5' end.DH883622|Mus musculus domesticus DNA, BAC clone: B6Ng01-063J03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,525,154 - 65,526,297)(65,422,441 - 65,423,546)
sequence
gaattcatctttatgtgttctgtctcacatacaaattatgtccaataaaa
tgcaggtcattggttggctgaaacaagaaggatagcatgtaaacagtggc
tgagttaaccatagagtcaacatagcagctgtcaatctgccaggtaagat
gctgcagttgatcttagccaaaaggccgagaaactatgccagataagatg
ttaagttgtctgataccactgacatagagaggttccagagcaggtatgtt
atggagaacaattgatgattgtggggaagacagaaaatggaaagttggta
taactatttaagagaaagatacatactgatggctcaaaacagaattctgt
acctcacaatacaagtaaggtcacaaaaggaaataacagatttaaataac
cattgtgcaggcttccattaacccagttttagtagaatgatcttgaagtg
gttcaagcaaatatagagtaagaactgaattgcccagaagtttcaacttt
gccagggataatctactctcacttttcttattgtatttctctttctttcc
tgagtcttagagatgacaatagggaagtgatgctctgcttaacttagagt
ataactgtagattaaaaatgacacatttcatggttctgtcctctacttac
tgggtctcaccctcatcaattccttcttgtcttcaacttcctgtaccttg
gcctccttcctgtacttagctcatgggctacctgagctccttctgtgtta
gactccccaactttacctctaaagtccctgtttagttacattctgttatg
cattttattatcagtctgtttcaaaattggttattttagccagatttcca
gaaatttcattctgagttctctctaaagtgaagatagctcaaatgacttt
aacttgcagatatcagtttttttgcaataagagacatataaattattttt
tgaggtgtactgcctcaccataaactgtttccatacctacataacatcta
aatttcagtaaaagttttgtgacattttggtgaccttaataaagaagcac
tctataatatgcataaacatgaatgataaacatagacatgtaatacctca
agtgtgtgagctgggttaagaactgat
gaattcaccagaatgtaggggtcatgattaattgtcaccatctgccatga
tagattggagaatgaggttatgtagcctttgagactcatgcttctctgat
ctgtccagtccttgccttgatgcagctgcaccatcagaaacaataaataa
accagatatagacagtgcagatgatctaacctggacagactaggtcctgt
gtctccgtagaacaatattctttatttcctatgcttttcaagtttctcaa
aatgcttatggggtacatataaagtcactatgcatgaaatgtttaacttt
ctctttctacaccccagttcccatgtgcatcctgtgttattccatatcct
ccacaactaagaccaaaaacaatcaaaataattaaaagtcatcaccaaat
aaaggccctaaatttcaacatcttgcccagagacgttcaaagcagggttg
agacaaaagcttatttatccaagagctcaccattaggaaacagatttcct
gacatcacatattggcaacttcctgttagcttttctgtgaggaaacattt
aattttctagactcctacttattcctgtgttatctgtgttatagcaaaag
ttctttttttttcacatggccaaatggctcacaagtgacgtaacacttgg
agtaggggctggtattcagggagcaacccgtaggtgccaagtgttcggag
tttggtagacagtgtgagattatagtgtttttctttccttgcattccatg
actttatttttaaacatctgccaggagaagaaaagtatgaggaagagtgt
cagagaattagatgttggtactttccctgagaaaggtcttccacattact
acatctgggagttagcagtagagtgagagtatctacaataaaatgcaagc
attttgattatttgtcctcagaattgaacttaattcttgactgagtgcta
agaaagtccatatgtgtctagagcagacgtcattgaggcagatgagaaag
actatgtagacagatctggaaaggggagctcctgactgtctggccagagc
aggttatgagaaagctgaggtcatgttattcagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_65525154_65526297
seq2: B6Ng01-063J03.b_46_1172 (reverse)

seq1  ATCAGGTTTCTT-ACACAGCTTCACACACTTTTGAGTTAATTTACATGTC  49
      |||||  ||||| || |||| ||||||||  ||||| ||  |||||||||
seq2  ATCAG--TTCTTAACCCAGC-TCACACAC--TTGAGGTA--TTACATGTC  43

seq1  TATGTTTATCATTTCATTGTTTATGCATATTTATAGAGTTGGCCTTCTTT  99
      ||||||||||| |||| |||||||||||| |||||||||    |||||||
seq2  TATGTTTATCA-TTCA-TGTTTATGCATA-TTATAGAGT---GCTTCTTT  87

seq1  ATTAAGGTCACCAAAAATGTCACAAAACTTTTTACTGAAATTTAGATGTT  149
      |||||||||||| ||||||||||||||| |||||||||||||||||||||
seq2  ATTAAGGTCACC-AAAATGTCACAAAAC-TTTTACTGAAATTTAGATGTT  135

seq1  ATGTAGGTATGGAAAACAGTTTATGGTGAGGCAGTACACCTCAAAAAATA  199
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGTATGG-AAACAGTTTATGGTGAGGCAGTACACCTCAAAAAATA  184

seq1  ATTTTATATGTTCTCTTATTGCAAAAAAACTGATATCTGCAAGTTAAAGT  249
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  A-TTTATATG-TCTCTTATTGCAAAAAAACTGATATCTGCAAGTTAAAGT  232

seq1  CATTTGAGCTATCTTCACTTTAGAGAGAACTCAGAATGAAATTTCTGGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAGCTATCTTCACTTTAGAGAGAACTCAGAATGAAATTTCTGGAA  282

seq1  ATCTGGCTAAAATAACCAATTTTGAAACAGACTGATAATAAAATGCATAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGCTAAAATAACCAATTTTGAAACAGACTGATAATAAAATGCATAA  332

seq1  CAGAATGTAACTAAACAGGGACTTTAGAGGTAAAGTTGGGGAGTCTAACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGTAACTAAACAGGGACTTTAGAGGTAAAGTTGGGGAGTCTAACA  382

seq1  CAGAAGGAGCTCAGGTAGCCCATGAGCTAAGTACAGGAAGGAGGCCAAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGAGCTCAGGTAGCCCATGAGCTAAGTACAGGAAGGAGGCCAAGG  432

seq1  TACAGGAAGTTGAAGACAAGAAGGAATTGATGAGGGTGAGACCCAGTAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAAGTTGAAGACAAGAAGGAATTGATGAGGGTGAGACCCAGTAAG  482

seq1  TAGAGGACAGAACCATGAAATGTGTCATTTTTAATCTACAGTTATACTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGACAGAACCATGAAATGTGTCATTTTTAATCTACAGTTATACTCT  532

seq1  AAGTTAAGCAGAGCATCACTTCCCTATTGTCATCTCTAAGACTCAGGAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAGCAGAGCATCACTTCCCTATTGTCATCTCTAAGACTCAGGAAA  582

seq1  GAAAGAGAAATACAATAAGAAAAGTGAGAGTAGATTATCCCTGGCAAAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAAATACAATAAGAAAAGTGAGAGTAGATTATCCCTGGCAAAGT  632

seq1  TGAAACTTCTGGGCAATTCAGTTCTTACTCTATATTTGCTTGAACCACTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTTCTGGGCAATTCAGTTCTTACTCTATATTTGCTTGAACCACTT  682

seq1  CAAGATCATTCTACTAAAACTGGGTTAATGGAAGCCTGCACAATGGTTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCATTCTACTAAAACTGGGTTAATGGAAGCCTGCACAATGGTTAT  732

seq1  TTAAATCTGTTATTTCCTTTTGTGACCTTACTTGTATTGTGAGGTACAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCTGTTATTTCCTTTTGTGACCTTACTTGTATTGTGAGGTACAGA  782

seq1  ATTCTGTTTTGAGCCATCAGTATGTATCTTTCTCTTAAATAGTTATACCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTTTGAGCCATCAGTATGTATCTTTCTCTTAAATAGTTATACCA  832

seq1  ACTTTCCATTTTCTGTCTTCCCCACAATCATCAATTGTTCTCCATAACAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCATTTTCTGTCTTCCCCACAATCATCAATTGTTCTCCATAACAT  882

seq1  ACCTGCTCTGGAACCTCTCTATGTCAGTGGTATCAGACAACTTAACATCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCTCTGGAACCTCTCTATGTCAGTGGTATCAGACAACTTAACATCT  932

seq1  TATCTGGCATAGTTTCTCGGCCTTTTGGCTAAGATCAACTGCAGCATCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGCATAGTTTCTCGGCCTTTTGGCTAAGATCAACTGCAGCATCTT  982

seq1  ACCTGGCAGATTGACAGCTGCTATGTTGACTCTATGGTTAACTCAGCCAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCAGATTGACAGCTGCTATGTTGACTCTATGGTTAACTCAGCCAC  1032

seq1  TGTTTACATGCTATCCTTCTTGTTTCAGCCAACCAATGACCTGCATTTTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACATGCTATCCTTCTTGTTTCAGCCAACCAATGACCTGCATTTTA  1082

seq1  TTGGACATAATTTGTATGTGAGACAGAACACATAAAGATGAATTC  1144
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACATAATTTGTATGTGAGACAGAACACATAAAGATGAATTC  1127

seq1: chr15_65422441_65423546
seq2: B6Ng01-063J03.g_66_1150

seq1  GAATTCACCAGAATGTAGGGGTCATGATTAATTGTCACCATCTGCCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAGAATGTAGGGGTCATGATTAATTGTCACCATCTGCCATGA  50

seq1  TAGATTGGAGAATGAGGTTATGTAGCCTTTGAGACTCATGCTTCTCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGGAGAATGAGGTTATGTAGCCTTTGAGACTCATGCTTCTCTGAT  100

seq1  CTGTCCAGTCCTTGCCTTGATGCAGCTGCACCATCAGAAACAATAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCAGTCCTTGCCTTGATGCAGCTGCACCATCAGAAACAATAAATAA  150

seq1  ACCAGATATAGACAGTGCAGATGATCTAACCTGGACAGACTAGGTCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGATATAGACAGTGCAGATGATCTAACCTGGACAGACTAGGTCCTGT  200

seq1  GTCTCCGTAGAACAATATTCTTTATTTCCTATGCTTTTCAAGTTTCTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCGTAGAACAATATTCTTTATTTCCTATGCTTTTCAAGTTTCTCAA  250

seq1  AATGCTTATGGGGTACATATAAAGTCACTATGCATGAAATGTTTAACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTATGGGGTACATATAAAGTCACTATGCATGAAATGTTTAACTTT  300

seq1  CTCTTTCTACACCCCAGTTCCCATGTGCATCCTGTGTTATTCCATATCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTACACCCCAGTTCCCATGTGCATCCTGTGTTATTCCATATCCT  350

seq1  CCACAACTAAGACCAAAAACAATCAAAATAATTAAAAGTCATCACCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACTAAGACCAAAAACAATCAAAATAATTAAAAGTCATCACCAAAT  400

seq1  AAAGGCCCTAAATTTCAACATCTTGCCCAGAGACGTTCAAAGCAGGGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCCTAAATTTCAACATCTTGCCCAGAGACGTTCAAAGCAGGGTTG  450

seq1  AGACAAAAGCTTATTTATCCAAGAGCTCACCATTAGGAAACAGATTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAGCTTATTTATCCAAGAGCTCACCATTAGGAAACAGATTTCCT  500

seq1  GACATCACATATTGGCAACTTCCTGTTAGCTTTTCTGTGAGGAAACATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCACATATTGGCAACTTCCTGTTAGCTTTTCTGTGAGGAAACATTT  550

seq1  AATTTTCTAGACTCCTACTTATTCCTGTGTTATCTGTGTTATAGCAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTAGACTCCTACTTATTCCTGTGTTATCTGTGTTATAGCAAAAG  600

seq1  TTCTTTTTTTTTCACATGGCCAAATGGCTCACAAGTGACGTAACACTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTCACATGGCCAAATGGCTCACAAGTGACGTAACACTTGG  650

seq1  AGTAGGGGCTGGTATTCAGGGAGCAACCCGTAGGTGCCAAGTGTTCGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGGGCTGGTATTCAGGGAGCAACCCGTAGGTGCCAAGTGTTCGGAG  700

seq1  TTTGGTAGACAGTGTGAGATTATAGTGTTTTTCTTTCCTTGCATTCCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAGACAGTGTGAGATTATAGTGTTTTTCTTTCCTTGCATTCCATG  750

seq1  ACTTTATTTTTAAACATCTGCCAGGAGAAGAAAAGTATGAGGAAGAGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTTTTAAACATCTGCCAGGAGAAGAAAAGTATGAGGAAGAGTGT  800

seq1  CAGAGAATTAGATGTTGGTACTTTCCTTGAGAAAGGTCTTCCACATTACT  850
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAGAGAATTAGATGTTGGTACTTTCCCTGAGAAAGGTCTTCCACATTACT  850

seq1  ACATCT-GGAGTTAGCAGTAAGAGTGAGAGTATCTACAATAAAATGCAAA  899
      |||||| |||||||||||| ||||||||||||||||||||||||||| ||
seq2  ACATCTGGGAGTTAGCAGT-AGAGTGAGAGTATCTACAATAAAATGC-AA  898

seq1  GCATTTTGATTATTTGTCCTCAAGAAATTGAACTTAATTCTTGACTGAGT  949
      ||||||||||||||||||||||   |||||||||||||||||||||||||
seq2  GCATTTTGATTATTTGTCCTCA--GAATTGAACTTAATTCTTGACTGAGT  946

seq1  GGCTAAGAAAGTCCATATGTGTCTAGAGCAGACGTCATTGAGGCAAGATG  999
       ||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  -GCTAAGAAAGTCCATATGTGTCTAGAGCAGACGTCATTGAGGC-AGATG  994

seq1  AGAAAAGGACTATGTAGGAACAGGATCTGGAAAGGGGAGCTTCCTGACCT  1049
      |||||  ||||||||||  ||| ||||||||||||||||| |||||| ||
seq2  AGAAA--GACTATGTAG--ACA-GATCTGGAAAGGGGAGC-TCCTGA-CT  1037

seq1  GTTCTTGCCCAAGAGCAAGGGTAATGAGGAAAGCTGAGGGTCCATGTTTA  1099
      | ||| |||  ||||||  ||| |||| |||||||||||   |||| |||
seq2  G-TCTGGCC--AGAGCA--GGTTATGA-GAAAGCTGAGG--TCATG-TTA  1078

seq1  ATCAGTC  1106
       ||||||
seq2  TTCAGTC  1085