BAC Information

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BAC

Clone NameB6Ng01-064F06
Chromosome15 (Build37)
Map Location 27,195,497 - 27,278,095
singlet/doubletdoublet
Overlap genenone
Upstream geneAK162044, Fbxl7, LOC622531, LOC625311
Downstream geneAnk, BC087945, LOC100040622, BC052328, Trio, LOC667126, Dnahc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064F06.bB6Ng01-064F06.g
ACCDH884149DH884150
length880738
definitionDH884149|Mus musculus domesticus DNA, BAC clone: B6Ng01-064F06, 5' end.DH884150|Mus musculus domesticus DNA, BAC clone: B6Ng01-064F06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,277,003 - 27,278,095)(27,195,497 - 27,196,186)
sequence
gaattcatcattggaagtggtggtacaagaatttgtgagctgtctcatgt
ggatgctaggaatcaaacataggttctctacaagagcagtgtgctattaa
ctgcagagccatttctctggtctaatgcaggtattgagcaaatgttggca
atatggtggcaagggtcatttggtctaagattgtcagggcttctgagcgt
gcccagagattcctacttggtattcacctttggtgaagcatggcatctgg
aacataagcaagtcacatgacattcaaggatggtgatggccataggttgg
gatgagtagccaacagaggagcatgtgacagtccagtagtcactaagcaa
cactcacctgtcacttctggtatctagaaagattttaaaatgtgaccgtt
gctttcgaggggattaaatgctatgacctggttactctgagcaggtatgt
tttgtaggcagagtttaaaaaattttttctggtaagcttgcaatgacttt
caatgatctcatcttgtcaaaaatctctgttgcaagatgttcagatgtac
ttggaaagtgaaattctcaatctgtttatctatttcaacactctatcatt
agcagctaggttacaaaaaatatttatttcaacagttccaatggttattt
gtgtctcctaagtgaaggaacactacatggcttagagactcagtttctcc
tctttgctctgaaactggctgagtatatgatcttgggataattcttcttc
ttcttcttcttcttcttcttcttcttcttcttctcttcttcttctctctc
ttctctcttgtctcttcttgttctcttgtcttgttcttcttctcttctct
cctctcctctctctcctcctctcttcttct
gaattcctcccctttatttgggccctcccgttcctggcttcatgccttca
ctcccattactggctctacttcttacgttatgagaaacatggcttcctgg
atccttgtgctatctaactcccctgagatctttctccctatttgtcactg
ctctggctgcttgacaccttatttatcctgtgtctttgtctactgttgta
ggattttccctgtccaattacattagtgcagaggaggcctgtgattggac
agagaaaaaggaggcggagctaagagttgcagagacagagagcctctgag
gggttggaggagaaccaagacggcttcagaagtgtacctgcatggcattt
accagccataagtagctacatgtggggcagtgcgcgctgggggaataaag
ggagtgggagataaccggagtcctgccagaattcaggtgctctgggtggg
cggccctgggtgggtgtctggctgtgagaatccacagaccccagctctgc
aggtggtggacaaggggcagtcctaggtaccaggttctcagtcttaggca
tcctagacaccactggacaccatggaagagctgagaacagaatggggccc
ccaggggcggctcagtcagccctgtggccgaagggaggagggggcgctag
atggttctcacgtgggtgggagtacttgatcgggtctatggcttgtgcat
aggaaggccttccggcaggaagttagatgctgctctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_27277003_27278095
seq2: B6Ng01-064F06.b_43_922 (reverse)

seq1  AGAAGAAGAAGAAGAAGAAGAAGAACAAGAACAAGAAGAAGAAGAACAAG  50
                                                        
seq2  --------------------------------------------------  0

seq1  AACAAGAAGAACAAGAAGAACAAGAAGAAGAACAAGAAGAACAAGAACAA  100
                                                        
seq2  --------------------------------------------------  0

seq1  GAAGAACAAGAAGAACAAGAACAAGAACAAGAAGAACAAGAAGAAGAAGA  150
                                                        
seq2  --------------------------------------------------  0

seq1  AGAACAAGAAGAAGAACAAGAAGAAGAACAAGAAGAACAAGAAGAAGAAG  200
                                                      ||
seq2  ------------------------------------------------AG  2

seq1  AAGAAGA-AGAAGAAGAAGAAGAAGAAGA-AGAAGAAGAAGAAGAACAAG  248
      ||||||| || || |||   || ||| || ||||| ||||||||||||||
seq2  AAGAAGAGAGGAGGAGAGAGAGGAGAGGAGAGAAG-AGAAGAAGAACAAG  51

seq1  AACAAGAAGAACAAGAAGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAA  298
       ||||| ||||||||||||   ||||||            ||||||   |
seq2  -ACAAG-AGAACAAGAAGA--GACAAGA-----------GAGAAGAGAGA  86

seq1  GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  348
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAAG-AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  135

seq1  AGAATTATCCCAAGATCATATACTCAGCCAGTTTCAGAGCAAAGAGGAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTATCCCAAGATCATATACTCAGCCAGTTTCAGAGCAAAGAGGAGA  185

seq1  AACTGAGTCTCTAAGCCATGTAGTGTTCCTTCACTTAGGAGACACAAATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGTCTCTAAGCCATGTAGTGTTCCTTCACTTAGGAGACACAAATA  235

seq1  ACCATTGGAACTGTTGAAATAAATATTTTTTGTAACCTAGCTGCTAATGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGGAACTGTTGAAATAAATATTTTTTGTAACCTAGCTGCTAATGA  285

seq1  TAGAGTGTTGAAATAGATAAACAGATTGAGAATTTCACTTTCTAAGTACA  548
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAGAGTGTTGAAATAGATAAACAGATTGAGAATTTCACTTTCCAAGTACA  335

seq1  TCTGAACATCTTGCAACAGAGATTTTTGACAAGATGAGATCATTGAAAGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACATCTTGCAACAGAGATTTTTGACAAGATGAGATCATTGAAAGT  385

seq1  CATTGCAAGCTTACCAGAAAAAATTTTTTAAACTCTGCCTACAAAACATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAAGCTTACCAGAAAAAATTTTTTAAACTCTGCCTACAAAACATA  435

seq1  CCTGCTCAGAGTAACCAGGTCATAGCATTTAATCCCCTCGAAAGCAACGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCAGAGTAACCAGGTCATAGCATTTAATCCCCTCGAAAGCAACGG  485

seq1  TCACATTTTAAAATCTTTCTAGATACCAGAAGTGACAGGTGAGTGTTGCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTTAAAATCTTTCTAGATACCAGAAGTGACAGGTGAGTGTTGCT  535

seq1  TAGTGACTACTGGACTGTCACATGCTCCTCTGTTGGCTACTCATCCCAAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGACTACTGGACTGTCACATGCTCCTCTGTTGGCTACTCATCCCAAC  585

seq1  CTATGGCCATCACCATCCTTGAATGTCATGTGACTTGCTTATGTTCCAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGCCATCACCATCCTTGAATGTCATGTGACTTGCTTATGTTCCAGA  635

seq1  TGCCATGCTTCACCAAAGGTGAATACCAAGTAGGAATCTCTGGGCACGCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGCTTCACCAAAGGTGAATACCAAGTAGGAATCTCTGGGCACGCT  685

seq1  CAGAAGCCCTGACAATCTTAGACCAAATGACCCTTGCCACCATATTGCCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCCCTGACAATCTTAGACCAAATGACCCTTGCCACCATATTGCCA  735

seq1  ACATTTGCTCAATACCTGCATTAGACCAGAGAAATGGCTCTGCAGTTAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGCTCAATACCTGCATTAGACCAGAGAAATGGCTCTGCAGTTAAT  785

seq1  AGCACACTGCTCTTGTAGAGAACCTATGTTTGATTCCTAGCATCCACATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACTGCTCTTGTAGAGAACCTATGTTTGATTCCTAGCATCCACATG  835

seq1  AGACAGCTCACAAATTCTTGTACCACCACTTCCAATGATGAATTC  1093
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCTCACAAATTCTTGTACCACCACTTCCAATGATGAATTC  880

seq1: chr15_27195497_27196186
seq2: B6Ng01-064F06.g_69_758

seq1  GAATTCCTCCCCTTTATTTGGGCCCTCCCGTTCCTGGCTTCATGCCTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCCTTTATTTGGGCCCTCCCGTTCCTGGCTTCATGCCTTCA  50

seq1  CTCCCATTACTGGCTCTACTTCTTACGTTATGAGAAACATGGCTTCCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATTACTGGCTCTACTTCTTACGTTATGAGAAACATGGCTTCCTGG  100

seq1  ATCCTTGTGCTATCTAACTCCCCTGAGATCTTTCTCCCTATTTGTCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGTGCTATCTAACTCCCCTGAGATCTTTCTCCCTATTTGTCACTG  150

seq1  CTCTGGCTGCTTGACACCTTATTTATCCTGTGTCTTTGTCTACTGTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTGCTTGACACCTTATTTATCCTGTGTCTTTGTCTACTGTTGTA  200

seq1  GGATTTTCCCTGTCCAATTACATTAGTGCAGAGGAGGCCTGTGATTGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTCCCTGTCCAATTACATTAGTGCAGAGGAGGCCTGTGATTGGAC  250

seq1  AGAGAAAAAGGAGGCGGAGCTAAGAGTTGCAGAGACAGAGAGCCTCTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAAGGAGGCGGAGCTAAGAGTTGCAGAGACAGAGAGCCTCTGAG  300

seq1  GGGTTGGAGGAGAACCAAGACGGCTTCAGAAGTGTACCTGCATGGCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGAGGAGAACCAAGACGGCTTCAGAAGTGTACCTGCATGGCATTT  350

seq1  ACCAGCCATAAGTAGCTACATGTGGGGCAGTGCGCGCTGGGGGAATAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCCATAAGTAGCTACATGTGGGGCAGTGCGCGCTGGGGGAATAAAG  400

seq1  GGAGTGGGAGATAACCGGAGTCCTGCCAGAATTCAGGTGCTCTGGGTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGGAGATAACCGGAGTCCTGCCAGAATTCAGGTGCTCTGGGTGGG  450

seq1  CGGCCCTGGGTGGGTGTCTGGCTGTGAGAATCCACAGACCCCAGCTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCCTGGGTGGGTGTCTGGCTGTGAGAATCCACAGACCCCAGCTCTGC  500

seq1  AGGTGGTGGACAAGGGGCAGTCCTAGGTACCAGGTTCTCAGTCTTAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTGGACAAGGGGCAGTCCTAGGTACCAGGTTCTCAGTCTTAGGCA  550

seq1  TCCTAGACACCACTGGACACCATGGAAGAGCTGAGAACAGAATGGGGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGACACCACTGGACACCATGGAAGAGCTGAGAACAGAATGGGGCCC  600

seq1  CCAGGGGCGGCTCAGTCAGCCCTGTGGCCGAAGGGAGGAGGGGGCGCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGCGGCTCAGTCAGCCCTGTGGCCGAAGGGAGGAGGGGGCGCTAG  650

seq1  ATGGTTCTCACGTGGGTGGGAGTACTTGATCGGGTCTATG  690
      ||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCTCACGTGGGTGGGAGTACTTGATCGGGTCTATG  690