BAC Information

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BAC

Clone NameB6Ng01-064H18
Chromosome15 (Build37)
Map Location 58,495,358 - 58,646,007
singlet/doubletdoublet
Overlap geneTmem65
Upstream geneZhx2, Derl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32, 8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e, EG631797
Downstream geneEG546638, Trmt12, Rnf139, Tatdn1, Ndufb9, Mtss1, LOC100040330, EG268809, LOC665565, Sqle, E430025E21Rik, Nsmce2, Trib1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064H18.bB6Ng01-064H18.g
ACCDH884259DH884260
length1,055961
definitionDH884259|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H18, 5' end.DH884260|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,495,358 - 58,496,410)(58,645,053 - 58,646,007)
sequence
gaattctcatctgctagatccacagcctcccaccaagtgtcattgtcccc
actggtcacatgactgtgatatgaatgcccagcgctgcctctgcccatcc
cttacccgcccagcaggtgagccaggttctagtgtgagtctcaagtacag
agtggaaaaaccagtctgagaagcgatagcgtattcacctgacagatggc
accagtgcctcgaaaggaaacttctgggctccacagcacagtccctagat
tctgtcctatctggggtggagattgaactgggggcctcctttcacagaca
cagtaaggaaatcaaagaaccgggatgtttgtccccacaaacctttcttc
ttctgtcataaagggccatttagtggtactggggaaactgagttgggttc
ctttcctgatactaaaagcatcaagactctgacttttatttttcctgatt
ttttaaagttgggatctgttatagtctgcatggatcttaaacttcttaca
gtcaagaataactgtgattcctgatcctctctgccactgtttcctaaata
ttaggattatggtcctattctaccatgcttggcttcttagatggatttta
atactatcgcatagcttttctagaggcaaaagtgcttacatctccataga
aaatcattctagattgttcctggtccatcacaaaacagaaacacaaactt
gtagcactgatattcaacccagacccagagcctggtacatgcggggcaag
cacttcaccattgatttacagaccctcggtctcaaaagattgattttaga
cttaagcacttgttcagtcagtgctgtctctgaatgctccggcttctggc
aattataccatcaatgtttttcttgagtgctgaaaaaatagaagctacct
tgggtagtgtttcctaatgcgaacagctgtggtaggtggtaaccattctc
acgagtgtgtatgtgcatttgtggtaccattctcacgtgtggtaatgtgc
ataccatccttaatgagtaggtcgaagtgcttaatatcaccaggcactgt
actaa
gaattcttgttcatcacagtcatgattcccaatctatgtttagatatctc
tgctttctctttctctacccttttctgaccctcaacttatttgcaaattt
gaagataacattcttcttgtgctgtattttgaaacatggcttcacagcag
gatgatactttgacattattttttttttcctgtagccaacaacaaaagtg
accttgcaggcccatgtttacagggctatcttccattgctgtaatctcag
aagcctactctgtgctttctacaggtttgaagcgaactggaacgtaattc
atattttcatgacgaaaccttaaattttatatgtaagcaaatcacactct
ttctggcagcattctgtagaaaatgtgtgggccatttagcaggtaggatc
tgttccttgtgagaaacttgaaggcagagtggagatgccagcatttacat
gcaccatacgtagataaggcgagccgagtctagtttgtatttaggtggtc
tatggcgtctgtgttcctaggaagacagggaaggtgggaacgtacgtgct
gaactgggacatgcacttgtggctgtggaagatacaagaatgtgttagag
aatggaaagcactcaagaccagagcccattaacatcctgatttcacatcc
tcagccactggcactgtgcctgtgtgccttgcacattccttaatagttcc
aggtgcttgtggtccaaaggatggcagtgagcaacgttagcatttcaggc
cagctgggttttgtgagtcctgtttctgttacaccctgccaccttgtcga
gtgggtcttattttgattttctgttttctgccactattttattttacttt
tcttacaggaaaattaagcaggcaattgaaagctttttcattgaaatgct
tagagggtcagaaagatactcagagttgtgccctgtaccttggctgcgtg
tcaaggctacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_58495358_58496410
seq2: B6Ng01-064H18.b_46_1100

seq1  GAATTCTCATCTGCTAGATCCACAGCCTCCCACCAAGTGTCATTGTCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCTGCTAGATCCACAGCCTCCCACCAAGTGTCATTGTCCCC  50

seq1  ACTGGTCACATGACTGTGATATGAATGCCCAGCGCTGCCTCTGCCCATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTCACATGACTGTGATATGAATGCCCAGCGCTGCCTCTGCCCATCC  100

seq1  CTTACCCGCCCAGCAGGTGAGCCAGGTTCTAGTGTGAGTCTCAAGTACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCCGCCCAGCAGGTGAGCCAGGTTCTAGTGTGAGTCTCAAGTACAG  150

seq1  AGTGGAAAAACCAGTCTGAGAAGCGATAGCGTATTCACCTGACAGATGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAAAACCAGTCTGAGAAGCGATAGCGTATTCACCTGACAGATGGC  200

seq1  ACCAGTGCCTCGAAAGGAAACTTCTGGGCTCCACAGCACAGTCCCTAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGCCTCGAAAGGAAACTTCTGGGCTCCACAGCACAGTCCCTAGAT  250

seq1  TCTGTCCTATCTGGGGTGGAGATTGAACTGGGGGCCTCCTTTCACAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTATCTGGGGTGGAGATTGAACTGGGGGCCTCCTTTCACAGACA  300

seq1  CAGTAAGGAAATCAAAGAACCGGGATGTTTGTCCCCACAAACCTTTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGGAAATCAAAGAACCGGGATGTTTGTCCCCACAAACCTTTCTTC  350

seq1  TTCTGTCATAAAGGGCCATTTAGTGGTACTGGGGAAACTGAGTTGGGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCATAAAGGGCCATTTAGTGGTACTGGGGAAACTGAGTTGGGTTC  400

seq1  CTTTCCTGATACTAAAAGCATCAAGACTCTGACTTTTATTTTTCCTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTGATACTAAAAGCATCAAGACTCTGACTTTTATTTTTCCTGATT  450

seq1  TTTTAAAGTTGGGATCTGTTATAGTCTGCATGGATCTTAAACTTCTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGTTGGGATCTGTTATAGTCTGCATGGATCTTAAACTTCTTACA  500

seq1  GTCAAGAATAACTGTGATTCCTGATCCTCTCTGCCACTGTTTCCTAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGAATAACTGTGATTCCTGATCCTCTCTGCCACTGTTTCCTAAATA  550

seq1  TTAGGATTATGGTCCTATTCTACCATGCTTGGCTTCTTAGATGGATTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATTATGGTCCTATTCTACCATGCTTGGCTTCTTAGATGGATTTTA  600

seq1  ATACTATCGCATAGCTTTTCTAGAGGCAAAAGTGCTTACATCTCCATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATCGCATAGCTTTTCTAGAGGCAAAAGTGCTTACATCTCCATAGA  650

seq1  AAATCATTCTAGAATGTTCCTGGTCCATCACAAAACAGAAACACAAACTT  700
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAATCATTCTAGATTGTTCCTGGTCCATCACAAAACAGAAACACAAACTT  700

seq1  GTAGCACTGATATTCAAACCCAGACCCAGAGCCTGGTACATGCGGGGCAA  750
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTAGCACTGATATTC-AACCCAGACCCAGAGCCTGGTACATGCGGGGCAA  749

seq1  GCACTTCACCATTGATTTACAGACCCTCGGTCTCAAAAGATTGATTTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCACCATTGATTTACAGACCCTCGGTCTCAAAAGATTGATTTTAG  799

seq1  ACTTAAGCAC-TGTTCAGTCAGTGCTGTCTCTGAATGCTCCGGC-TCTGG  848
      |||||||||| ||||||||||||||||||||||||||||||||| |||||
seq2  ACTTAAGCACTTGTTCAGTCAGTGCTGTCTCTGAATGCTCCGGCTTCTGG  849

seq1  CAATTATACCATC-ATGTTTTCCTGAAGTGCTG-AGAAATAGAAGCTACC  896
      ||||||||||||| ||||||| ||  ||||||| | ||||||||||||||
seq2  CAATTATACCATCAATGTTTTTCTTGAGTGCTGAAAAAATAGAAGCTACC  899

seq1  -TGGGTAGTGTTTCCTAATGCGAACAGCTGT-GTAGGTGGT-ACCATTCT  943
       |||||||||||||||||||||||||||||| ||||||||| ||||||||
seq2  TTGGGTAGTGTTTCCTAATGCGAACAGCTGTGGTAGGTGGTAACCATTCT  949

seq1  CACGATGTGGTAATGTGCA-TTGTGGTACCATTCTCACGGTGTGGTAATG  992
      ||||| |||   ||||||| |||||||||||||||||| |||||||||||
seq2  CACGA-GTGTGTATGTGCATTTGTGGTACCATTCTCAC-GTGTGGTAATG  997

seq1  TGCATACCCCATCCTTAATGAGTAGGTCAGAGTGCTTAATATCACCAGGC  1042
      ||||||  ||||||||||||||||||||  ||||||||||||||||||||
seq2  TGCATA--CCATCCTTAATGAGTAGGTCGAAGTGCTTAATATCACCAGGC  1045

seq1  ACGTGTACTAA  1053
      || ||||||||
seq2  AC-TGTACTAA  1055

seq1: chr15_58645053_58646007
seq2: B6Ng01-064H18.g_71_1017 (reverse)

seq1  GCAGCCAGGGTACAGTGCACAACTCCTGAGCTATCTCTCTGACCCCTCTT  50
      ||||||| ||||||| |||||||| ||||| ||||| ||||| ||||| |
seq2  GCAGCCAAGGTACAGGGCACAACT-CTGAG-TATCTTTCTGA-CCCTC-T  46

seq1  AAGCATTTTCATTGAAAAAGCTTTTCATTGCCTGCTTAATTTTCTTGTAA  100
      ||||| ||||| ||||||||||||  |||||||||||||||||| |||||
seq2  AAGCA-TTTCAATGAAAAAGCTTTCAATTGCCTGCTTAATTTTCCTGTAA  95

seq1  GAAAAGTAAAATAAAATAGTTGCAGGAAAACAGGAAAATCAAAATAAGAA  150
      |||||||||||||||||||| ||| ||||||| |||||||||||||||| 
seq2  GAAAAGTAAAATAAAATAGTGGCA-GAAAACA-GAAAATCAAAATAAGA-  142

seq1  CCCCACTCGACAAGGTGGCAGGCTGTAACAGAAACAGGACTCACAAAACC  200
       ||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  -CCCACTCGACAAGGTGGCAGGGTGTAACAGAAACAGGACTCACAAAACC  191

seq1  CAGCTGGCCCTGAAATGCTAACGTTGCTCACTGCCATCC-TTGGACCACA  249
      ||||||| ||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGCTGG-CCTGAAATGCTAACGTTGCTCACTGCCATCCTTTGGACCACA  240

seq1  AGCACCTGGAACTATTAAGGAATGTGCAAGGCACACAGGCACAGTGCCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTGGAACTATTAAGGAATGTGCAAGGCACACAGGCACAGTGCCAG  290

seq1  TGGCTGAGGATGTGAAATCAGGATGTTAATGGGCTCTGGTCTTGAGTGC-  348
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGGCTGAGGATGTGAAATCAGGATGTTAATGGGCTCTGGTCTTGAGTGCT  340

seq1  TTCCATTCTCTAACACATTCTTGTATCTTCCACAGCCACAAGTGCATGTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCTCTAACACATTCTTGTATCTTCCACAGCCACAAGTGCATGTC  390

seq1  CCAGTTCAGCACGTACGTTCCCACCTTCCCTGTCTTCCTAGGAACACAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCAGCACGTACGTTCCCACCTTCCCTGTCTTCCTAGGAACACAGA  440

seq1  CGCCATAGACCACCTAAATACAAACTAGACTCGGCTCGCCTTATCTACGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCATAGACCACCTAAATACAAACTAGACTCGGCTCGCCTTATCTACGT  490

seq1  ATGGTGCATGTAAATGCTGGCATCTCCACTCTGCCTTCAAGTTTCTCACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCATGTAAATGCTGGCATCTCCACTCTGCCTTCAAGTTTCTCACA  540

seq1  AGGAACAGATCCTACCTGCTAAATGGCCCACACATTTTCTACAGAATGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAGATCCTACCTGCTAAATGGCCCACACATTTTCTACAGAATGCT  590

seq1  GCCAGAAAGAGTGTGATTTGCTTACATATAAAATTTAAGGTTTCGTCATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAAAGAGTGTGATTTGCTTACATATAAAATTTAAGGTTTCGTCATG  640

seq1  AAAATATGAATTACGTTCCAGTTCGCTTCAAACCTGTAGAAAGCACAGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGAATTACGTTCCAGTTCGCTTCAAACCTGTAGAAAGCACAGAG  690

seq1  TAGGCTTCTGAGATTACAGCAATGGAAGATAGCCCTGTAAACATGGGCCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTCTGAGATTACAGCAATGGAAGATAGCCCTGTAAACATGGGCCT  740

seq1  GCAAGGTCACTTTTGTTGTTGGCTACAGGAAAAAAAAAATAATGTCAAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTCACTTTTGTTGTTGGCTACAGGAAAAAAAAAATAATGTCAAAG  790

seq1  TATCATCCTGCTGTGAAGCCATGTTTCAAAATACAGCACAAGAAGAATGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCCTGCTGTGAAGCCATGTTTCAAAATACAGCACAAGAAGAATGT  840

seq1  TATCTTCAAATTTGCAAATAAGTTGAGGGTCAGAAAAGGGTAGAGAAAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCAAATTTGCAAATAAGTTGAGGGTCAGAAAAGGGTAGAGAAAGA  890

seq1  GAAAGCAGAGATATCTAAACATAGATTGGGAATCATGACTGTGATGAACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAGAGATATCTAAACATAGATTGGGAATCATGACTGTGATGAACA  940

seq1  AGAATTC  955
      |||||||
seq2  AGAATTC  947