BAC Information

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BAC

Clone NameB6Ng01-065C24
Chromosome15 (Build37)
Map Location 57,185,428 - 57,186,224
singlet/doubletsinglet
Overlap geneBC026439
Upstream geneHas2, EG594843, LOC435442, LOC100040067, LOC100039984
Downstream geneZhx2, Derl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32, 8230402K04Rik, Anxa13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065C24.b
ACCDH884739
length903
definitionDH884739|Mus musculus domesticus DNA, BAC clone: B6Ng01-065C24, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatgagttcgctttaacttataatagaattgttactgtttgc
ctcgatggcacaaaccctctattcactttacaactccattggatcgcaac
ctaaagccaggtgtgctggctaaaataagacaaagatcctcacgacaaat
actaagttctgtagccccacaactggcgcctgggggacatggtagttagc
atttcaaaaggcctatataaacatgctgtgtagcattgctagctactccc
cacatggccactctgctggctgcctcttcatgctacctatgacttcattt
aatctgtattacaggtacctccttacagatttggaattacccacaaaact
ccaagcactgccctcttacgagctgtcttctgggagacaaatcctgccac
actttgtctagatgtccaggctttctctgaactttaggtggaagccacca
tgaaactgtagttcaaacaatatgatgcctgctacaactgccacttgcac
atggcaccaagatttttgagcaacatgagtaatatctgggtgtctttgaa
ccactgctgcagcagccacttatatatagccaacaatgaaaagcatgaat
cctagagaagtaatttggtgaagtactccatgcaaaccttaacaataata
gataacttgcagttccgtgtcagctgaaaacctattgcaaaagtatttga
tgacagaaacacaagttaaagtaagtatcctatgacttttactatgtata
tttgcagttttcatatattgatcgaataaacagttgctggacaggccaat
actttgcatattttgacagaaaatatggtataaacttcatactgaaacag
cgcacatcatccctaataatgttgctatgatgataaaaccttgaagtctc
aca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_57185428_57186224
seq2: B6Ng01-065C24.b_154_941

seq1  CTGGCTAAAATAAGACAAAGATCCTCAGGACAAATACTAAGTTCTGTAGC  50
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTGGCTAAAATAAGACAAAGATCCTCACGACAAATACTAAGTTCTGTAGC  50

seq1  CCCACAACTGGCACCTGGGGCACATGGTAGTTAGCATTTCAAAAGGCCTA  100
      |||||||||||| ||||||| |||||||||||||||||||||||||||||
seq2  CCCACAACTGGCGCCTGGGGGACATGGTAGTTAGCATTTCAAAAGGCCTA  100

seq1  TATAAACATGCTGTGTAGCATTGCTAGCTACAGCCCACATGGCCACTCTG  150
      |||||||||||||||||||||||||||||||  |||||||||||||||||
seq2  TATAAACATGCTGTGTAGCATTGCTAGCTACTCCCCACATGGCCACTCTG  150

seq1  CTGGCTGCCTCTTCATGCTACCTATGACTTCATTTAATCTGTATTACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGCCTCTTCATGCTACCTATGACTTCATTTAATCTGTATTACAGG  200

seq1  TACCTCCTTACAGATTTGGAATTACCCACAAAACTCCAAGCACTGCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCTTACAGATTTGGAATTACCCACAAAACTCCAAGCACTGCCCTC  250

seq1  TTAGGAGCTGTCTTCTGGGAGACAAATCCTGCCACACTTTGTCTAGATGT  300
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGAGCTGTCTTCTGGGAGACAAATCCTGCCACACTTTGTCTAGATGT  300

seq1  CCAGGCTTTCTCTGAAAATTAGGTGGAAGCCACCATGAAACTGTAGTTCA  350
      ||||||||||||||||  ||||||||||||||||||||||||||||||||
seq2  CCAGGCTTTCTCTGAACTTTAGGTGGAAGCCACCATGAAACTGTAGTTCA  350

seq1  AACAATATGATGCCTGCTACAACTGCCACATGCACATGGCACCAAGATTT  400
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AACAATATGATGCCTGCTACAACTGCCACTTGCACATGGCACCAAGATTT  400

seq1  TTGAGCAACATGAGTAATATCTGGGTGTCTTTGAACCACTGCTGCAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCAACATGAGTAATATCTGGGTGTCTTTGAACCACTGCTGCAGCAG  450

seq1  CCACTTATATATAGCCAACAATGAAAAGCATGAATCCTAGAGAAGTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTATATATAGCCAACAATGAAAAGCATGAATCCTAGAGAAGTAATT  500

seq1  TGGTGAAGTATTTCAGATACAAACCTTAACAATAATAGATAACTTTCAGT  550
      |||||||||| | |  || |||||||||||||||||||||||||| ||||
seq2  TGGTGAAGTACTCC--ATGCAAACCTTAACAATAATAGATAACTTGCAGT  548

seq1  TTCGTGTCAGCTGAAAACCTATTGCAAAAAGTATTTGATGACAGAAACAG  600
      | ||||||||||||||||||||||| ||||||||||||||||||||||| 
seq2  TCCGTGTCAGCTGAAAACCTATTGC-AAAAGTATTTGATGACAGAAACAC  597

seq1  AATTTAAAGTAAAGTATCCTAGGACTTTTATTATGTATATTTGGAGTTTT  650
      || ||||||| |||||||||| |||||||| |||||||||||| ||||||
seq2  AAGTTAAAGT-AAGTATCCTATGACTTTTACTATGTATATTTGCAGTTTT  646

seq1  CATATATTGATCTAATAAACAGTTGCTGGACATGGCAATACTTTGTATAT  700
      |||||||||||| ||||||||||||||||||| | |||||||||| ||| 
seq2  CATATATTGATCGAATAAACAGTTGCTGGACAGGCCAATACTTTGCATA-  695

seq1  TTTTGACAGAAAATATGGTAATAGACTTCATTATGATACAGTGCAAAGCA  750
      ||||||||||||||||||| ||| |||||||  ||| |||| ||| | ||
seq2  TTTTGACAGAAAATATGGT-ATAAACTTCATACTGAAACAGCGCACATCA  744

seq1  TCGTTAAATATGTTTGCTATGATGATGATAACCTTGAAGTTCTCACA  797
      ||  |||  ||| ||||||||||||| | |||||||||| |||||||
seq2  TCCCTAATAATG-TTGCTATGATGAT-AAAACCTTGAAG-TCTCACA  788