BAC Information

Click to search

BAC

Clone NameB6Ng01-065G22
Chromosome15 (Build37)
Map Location 54,118,394 - 54,119,499
singlet/doubletsinglet
Overlap genenone
Upstream geneExt1, Samd12, EG665097, EG621631, Tnfrsf11b
Downstream geneLOC665280, EG383032, Colec10, Mal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065G22.bB6Ng01-065G22.g
ACCDH884908DH884909
length1,105170
definitionDH884908|Mus musculus domesticus DNA, BAC clone: B6Ng01-065G22, 5' end.DH884909|Mus musculus domesticus DNA, BAC clone: B6Ng01-065G22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataatactacatgaggattctagcagagccaaataatgggacag
tttttgagtcctaaagcactctaagtttctgtagcttttagtaatagtta
actcccttgatcctacttttaatttgcattcaaaatgaatagaaagacat
taaaaagctaaatgtgaaaaataaacagctgacatactacatattccagt
cttaccaaaaagtagcttgaatactttcatcctcaaagaataatagataa
tttaaaagacagacaagctatgatacaatgtaaacacatatttaagtcat
tacacagtacaacataaatacgtatagtttttactcatcaatttataaaa
agacaccaaggcaggttgatgatacagcacaacagcaaagcagagcgttc
acatggctttctgttctgctcctagcacaaggaaaaaaacaaacaaacaa
acaagagtaagcaaagaaagcagcagggagatatccaaagtgaagcattt
ttgctaggggcagatgtgacaatgtgtgattgttttaacttttagtttta
gtatctatatgttttctatatacttgttaattattttttgcccaaacaat
ggcgtcatcttgaatgttcatggtgtgtaaatgctgcatgagtatttcac
acataacaacttcttggacacgggcactgttgttgttactgtctcttctg
taataagactgtatctagagaagttagctaaagtacagactgtcagcagc
cagatttgggactgcacagtttaatttcaaagtctatgtttctcattatc
tctgctgcctttactagatggaacagttttctgaagctgaaattcaatta
attccattatgcagaactgttaagtgtctgggatatcttcagagtaccca
gaattagaagtaaataaaaattagcttcccttatcagagaaatgtgcatt
attcatttatacttattggcaatcggtcacaaacttgtcaaccaatgtgt
gctaatacctttgatgaagttatagctatcctttactggaaagttatgag
acatttgccaaacaatgacctgggatcaaatgtaagaatatccagagaaa
gaaga
ctttacactgggacattgagccttcacaggaccaagggcttcttctccca
ttgacgcccaataagaccatccgctgctacatatgtggctggagcatggg
tccatccatgtgtactctttggttggtggtttatttcctgggatctctga
tggaggggtgggggggagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_54118394_54119499
seq2: B6Ng01-065G22.b_47_1151

seq1  GAATTCATAATACTACATGAGGATTCTAGCAGAGCCAAATAATGGGACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAATACTACATGAGGATTCTAGCAGAGCCAAATAATGGGACAG  50

seq1  TTTTTGAGTCCTAAAGCACTCTAAGTTTCTGTAGCTTTTAGTAATAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGTCCTAAAGCACTCTAAGTTTCTGTAGCTTTTAGTAATAGTTA  100

seq1  ACTCCCTTGATCCTACTTTTAATTTGCATTCAAAATGAATAGAAAGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTTGATCCTACTTTTAATTTGCATTCAAAATGAATAGAAAGACAT  150

seq1  TAAAAAGCTAAATGTGAAAAATAAACAGCTGACATACTACATATTCCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGCTAAATGTGAAAAATAAACAGCTGACATACTACATATTCCAGT  200

seq1  CTTACCAAAAAGTAGCTTGAATACTTTCATCCTCAAAGAATAATAGATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCAAAAAGTAGCTTGAATACTTTCATCCTCAAAGAATAATAGATAA  250

seq1  TTTAAAAGACAGACAAGCTATGATACAATGTAAACACATATTTAAGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGACAGACAAGCTATGATACAATGTAAACACATATTTAAGTCAT  300

seq1  TACACAGTACAACATAAATACGTATAGTTTTTACTCATCAATTTATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTACAACATAAATACGTATAGTTTTTACTCATCAATTTATAAAA  350

seq1  AGACACCAAGGCAGGTTGATGATACAGCACAACAGCAAAGCAGAGCGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCAAGGCAGGTTGATGATACAGCACAACAGCAAAGCAGAGCGTTC  400

seq1  ACATGGCTTTCTGTTCTGCTCCTAGCACAAGGAAAAAAACAAACAAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCTTTCTGTTCTGCTCCTAGCACAAGGAAAAAAACAAACAAACAA  450

seq1  ACAAGAGTAAGCAAAGAAAGCAGCAGGGAGATATCCAAAGTGAAGCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGTAAGCAAAGAAAGCAGCAGGGAGATATCCAAAGTGAAGCATTT  500

seq1  TTGCTAGGGGCAGATGTGACAATGTGTGATTGTTTTAACTTTTAGTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGGGGCAGATGTGACAATGTGTGATTGTTTTAACTTTTAGTTTTA  550

seq1  GTATCTATATGTTTTCTATATACTTGTTAATTATTTTTTGCCCAAACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTATATGTTTTCTATATACTTGTTAATTATTTTTTGCCCAAACAAT  600

seq1  GGCGTCATCTTGAATGTTCATGGTGTGTAAATGCTGCATGAGTATTTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTCATCTTGAATGTTCATGGTGTGTAAATGCTGCATGAGTATTTCAC  650

seq1  ACATAACAACTTCTTGGACACGGGCACTGTTGTTGTTACTGTCTCTTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACAACTTCTTGGACACGGGCACTGTTGTTGTTACTGTCTCTTCTG  700

seq1  TAATAAGACTGTATCTAGAGAAGTTAGCTAAAGTACAGACTGTCAGCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGACTGTATCTAGAGAAGTTAGCTAAAGTACAGACTGTCAGCAGC  750

seq1  CAGATTTGGGACTGCACAGTTTAATTTCAAAGTCTATGTTTCTCATTATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTGGGACTGCACAGTTTAATTTCAAAGTCTATGTTTCTCATTATC  800

seq1  TCTGCTGCCTTTACTAGATGGAACAGTTTTCTGAAGCTGAAATTCAATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGCCTTTACTAGATGGAACAGTTTTCTGAAGCTGAAATTCAATTA  850

seq1  ATTCCATTATGCAGAACTGTTAAGTGTCTGGGATATCTTCAGAGTACCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTCCATTATGCAGAACTGTTAAGTGTCTGGGATATCTTCAGAGTACCC-  899

seq1  AGAATTAGAAGTAAATAAAAATTAGCTTCCCTTATCAGAGAAATGTGCA-  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGAATTAGAAGTAAATAAAAATTAGCTTCCCTTATCAGAGAAATGTGCAT  949

seq1  TATTCATATATACTTATTGGCAATCGGTCCACAAAC-TGTCAACCAATGT  998
      ||||||| |||||||||||||||||||| ||||||| |||||||||||||
seq2  TATTCATTTATACTTATTGGCAATCGGT-CACAAACTTGTCAACCAATGT  998

seq1  GTGCTAATA-CTTTGATGAAGTTATAGCTATCCTTTACTGGAAAGTTATG  1047
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAATACCTTTGATGAAGTTATAGCTATCCTTTACTGGAAAGTTATG  1048

seq1  AAGACAATTTGCCAAACAAATGAACT-GGATCAAATGTAAGAATATCCAA  1096
       |||| ||||||||||| ||||| || ||||||||||||||||||||| |
seq2  -AGAC-ATTTGCCAAAC-AATGACCTGGGATCAAATGTAAGAATATCC-A  1094

seq1  GAG-AAGAAGA  1106
      ||| |||||||
seq2  GAGAAAGAAGA  1105