BAC Information

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BAC

Clone NameB6Ng01-065I17
Chromosome15 (Build37)
Map Location 34,245,125 - 34,245,357
singlet/doubletsinglet
Overlap geneMatn2
Upstream genePgcp, 1700084J12Rik, Tspyl5, LOC675463, Mtdh, Laptm4b
Downstream geneRpl30, BC030476, Hrsp12, Pop1, Npal2, Kcns2, Stk3, Osr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065I17.bB6Ng01-065I17.g
ACCDH884988DH884989
length458237
definitionDH884988|Mus musculus domesticus DNA, BAC clone: B6Ng01-065I17, 5' end.DH884989|Mus musculus domesticus DNA, BAC clone: B6Ng01-065I17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tagtatttcgcttaaaaaacaattatgcctaacataactctgagaggctc
cacccagcacctgatggaagcagatgcagagccaaacattaactagagtc
cagtgagtcttgtggaagagatgcaggaaggattgagggacccaaagggg
ataggaactccacaggaaaaccaacaaagtcaactaacctggacccttag
gggctcccagagactgaaccaccaaccaaagagctagcatggactggacc
tagccccctccccacatatatgtagcagatatatagcttggttgtcatgc
aaatcccccaacaactggagaggggatgtctctgaatctgcggcttgttt
ctggatcccattacccttactgggccaccttgtccggatgcagtgggaaa
ggatgtttcctgcagaaacttgatgtgccaggatggggtgatacgggggg
gagggggg
cagtcttagtcactgtgctgtgctccctcataataaatgtatacacgttt
ggtgtggtgttatatgataagctgaggcaggaggatgatgggttcaagat
taacttgggctacatagcaatactctattaaaatagaaaggatgtaggag
gctgggggctgggggcttgggactgaaggttgggtctggtggctggaggt
tggggctggggtctgggatctggaggttggggctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_34245125_34245357
seq2: B6Ng01-065I17.g_78_310

seq1  CTTAGTCACTGTGCTGTGCTCCCTCATAATAAATGTATACACGTTTGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCACTGTGCTGTGCTCCCTCATAATAAATGTATACACGTTTGGTG  50

seq1  TGGTGTTATATGATAAGCTGAGGCAGGAGGATGATGGGTTCAAGATTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTATATGATAAGCTGAGGCAGGAGGATGATGGGTTCAAGATTAAC  100

seq1  TTGGGCTACATAGCAATACTCTATTAAAATAGAAAGGATGTAGGAGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTACATAGCAATACTCTATTAAAATAGAAAGGATGTAGGAGGCTG  150

seq1  GGGGCTGGGGGCTTGGGACTGAAGGTTGGGTCTGGTGGCTGGAGGTTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGGGGGCTTGGGACTGAAGGTTGGGTCTGGTGGCTGGAGGTTGGG  200

seq1  GCTGGGGTCTGGGATCTGGAGGTTGGGGCTGGG  233
      |||||||||||||||||||||||||||||||||
seq2  GCTGGGGTCTGGGATCTGGAGGTTGGGGCTGGG  233