BAC Information

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BAC

Clone NameB6Ng01-065L09
Chromosome15 (Build37)
Map Location 6,160,803 - 6,337,777
singlet/doubletdoublet
Overlap geneDab2
Upstream geneTtc33, Ptger4, LOC100039322, LOC100039308, LOC666291, LOC666319, LOC100039358, LOC666323
Downstream geneC9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik, Osmr, Lifr, Egflam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065L09.bB6Ng01-065L09.g
ACCDH885105DH885106
length1,1131,017
definitionDH885105|Mus musculus domesticus DNA, BAC clone: B6Ng01-065L09, 5' end.DH885106|Mus musculus domesticus DNA, BAC clone: B6Ng01-065L09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,160,803 - 6,161,935)(6,336,743 - 6,337,777)
sequence
gaattcagtacttaggacgaagatgttgcgatccatctgtgttgctctga
atgatacgagttcatgcctttgcaatgcaccttagaatttcacaaaatct
cagatcaaagtcactgtatctgtaccctttctgcagacacgtgttctcct
ttccatttcataaatatttagagttgttaaagcttgaacaattaaataaa
tatttgtaattaaatataactgtcaaatgtttatattatttcatggtcct
gtcaacaaagttgaattctggcaaataactaataaattcaattttattta
ttttagccattctaattacctgtattgtagaacattcttttcgctcacaa
ttctattcctaatcgtgcctgccactcatgttttctgtgtattttgtaat
ttattttctgatacagctttgagaggaagtgtgctttgcaaatttagctc
gtagcaaaggctagctcatacctggtggctcattttaccatctttacaaa
ctcctctttacagagcaaatgttttaatttgtgggttagaatgctgctca
agggaagtgtgcttgtctaaagctcttaatgcactcaggtactagaataa
acttaatttttcatttacatgaaatccatcttagaaaatgtcagtgctct
caaacagttttgaacctggactcttttctttgaggatttcttttcatttc
tagttataggctctatatttggaattatcatctttcttgagtaattcaga
taagccatgtgaggtagaagatgaatttacaacacttttacacatattca
gttaccatggcacctttgctaagaggactcttattatcaagtcattattt
tgactagctgcaaaattttatttgaacatatatgtaaggtttaaattctg
aaatctactgggcctgtagacataggtgtttccttaaatatatagttatt
tatagtcttggtattaagtactgtcttaatcccatgttttcccttacaaa
atttcattcctagtaattgtaaattatggtaattattataccccacaagg
aaatgttgatggttttgtccaaaccacattgaagtgtatcctatgggaag
ggaaaaagttttc
gaattccagactcaggattaagtggaggagagcaggcaggaagaaataac
agccagctctatgccgcaaagagaaccgctacgttggcagggtctccaag
gttttaaacacagtttagtccctcttcttgaattcttaatccttccaaat
aatttacaacagtcaagaaaaacagcattcaaacgcttcacgatttaaaa
caagtttgttacgtggcttgggcagatacttttcttaggaatgctggtat
aagacaaagttcacatttttaatgccctgtgctgtcagtcagcagaaaat
agctcctcggaggcacagaccatgtccccagcctttgtcgcacagtaaaa
ctgaacatcattcaggagtttattaggtggtcagcagccacaccgcgcat
tccctgggatgtcccctaagccctaaaaactagggctcgtgtacaacaca
cacacacacacacacacacacacacacacacacacacacacacacacaca
gggactcgttaaatgtcacaggatgggcgccttgagtccgaccccaaagg
taaaatgcatttccttggaagcattccacagatgtcaggccacaaaaccc
gctgctctccccggagtacactgtctcatttgtaagatttccccagcgcc
caaggtctgcagccaaggcagggatgggaagagaggagccagcaaaggag
agaagtatgtcgcaaaaaaagaaaaaaagaaaaaaaaagaaaaaaaggga
aaaaagagaaagaaagaaagatagaaagaaggaagaagaaagaagaaaga
agaaagatggacgaagggaaggggatggcagattactcacggactagcta
gtgcttctgtggagccagctagacttccccgcgcccgaagctcagggctg
cagcgctagaacgcggaaacgccacttaatagccgcgcggccatcccggt
aagattggttcttatcaaatgctgccggaggactctcaggatgtggcggc
ggaagtttttgtgcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_6160803_6161935
seq2: B6Ng01-065L09.b_45_1157

seq1  GAATTCAGTACTTAGGACGAAGATGTTGCGATCCATCTGTGTTGCTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTACTTAGGACGAAGATGTTGCGATCCATCTGTGTTGCTCTGA  50

seq1  ATGATACGAGTTCATGCCTTTGCAATGCACCTTAGAATTTCACAAAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACGAGTTCATGCCTTTGCAATGCACCTTAGAATTTCACAAAATCT  100

seq1  CAGATCAAAGTCACTGTATCTGTACCCTTTCTGCAGACACGTGTTCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCAAAGTCACTGTATCTGTACCCTTTCTGCAGACACGTGTTCTCCT  150

seq1  TTCCATTTCATAAATATTTAGAGTTGTTAAAGCTTGAACAATTAAATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTCATAAATATTTAGAGTTGTTAAAGCTTGAACAATTAAATAAA  200

seq1  TATTTGTAATTAAATATAACTGTCAAATGTTTATATTATTTCATGGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTAATTAAATATAACTGTCAAATGTTTATATTATTTCATGGTCCT  250

seq1  GTCAACAAAGTTGAATTCTGGCAAATAACTAATAAATTCAATTTTATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACAAAGTTGAATTCTGGCAAATAACTAATAAATTCAATTTTATTTA  300

seq1  TTTTAGCCATTCTAATTACCTGTATTGTAGAACATTCTTTTCGCTCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCCATTCTAATTACCTGTATTGTAGAACATTCTTTTCGCTCACAA  350

seq1  TTCTATTCCTAATCGTGCCTGCCACTCATGTTTTCTGTGTATTTTGTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTCCTAATCGTGCCTGCCACTCATGTTTTCTGTGTATTTTGTAAT  400

seq1  TTATTTTCTGATACAGCTTTGAGAGGAAGTGTGCTTTGCAAATTTAGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTGATACAGCTTTGAGAGGAAGTGTGCTTTGCAAATTTAGCTC  450

seq1  GTAGCAAAGGCTAGCTCATACCTGGTGGCTCATTTTACCATCTTTACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAAAGGCTAGCTCATACCTGGTGGCTCATTTTACCATCTTTACAAA  500

seq1  CTCCTCTTTACAGAGCAAATGTTTTAATTTGTGGGTTAGAATGCTGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTTACAGAGCAAATGTTTTAATTTGTGGGTTAGAATGCTGCTCA  550

seq1  AGGGAAGTGTGCTTGTCTAAAGCTCTTAATGCACTCAGGTACTAGAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGTGTGCTTGTCTAAAGCTCTTAATGCACTCAGGTACTAGAATAA  600

seq1  ACTTAATTTTTCATTTACATGAAATCCATCTTAGAAAATGTCAGTGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATTTTTCATTTACATGAAATCCATCTTAGAAAATGTCAGTGCTCT  650

seq1  CAAACAGTTTTGAACCTGGACTCTTTTCTTTGAGGATTTCTTTTCATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGTTTTGAACCTGGACTCTTTTCTTTGAGGATTTCTTTTCATTTC  700

seq1  TAGTTATAGGCTCTATATTTGGAATTATCATCTTTCTTGAGTTAATTCAG  750
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAGTTATAGGCTCTATATTTGGAATTATCATCTTTCTTGAG-TAATTCAG  749

seq1  ATAAGCCATGTGAGGTAGAAGATGAA-TTACAACACTTTTACACATATTC  799
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATAAGCCATGTGAGGTAGAAGATGAATTTACAACACTTTTACACATATTC  799

seq1  AGTTACCATGGCACCTTTGCTAAGAGGACTCTTATTATCAAGTCATTATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCATGGCACCTTTGCTAAGAGGACTCTTATTATCAAGTCATTATT  849

seq1  TTGACTAGCTGCAAAATTTTATTTGAACATATATGTAAGGTTTAAATTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTAGCTGCAAAATTTTATTTGAACATATATGTAAGGTTTAAATTCT  899

seq1  GAAATCTACTGGGCCTGTAGACATAGGTGTTTCCTTAAATATATTAGTTA  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAAATCTACTGGGCCTGTAGACATAGGTGTTTCCTTAAATATA-TAGTTA  948

seq1  TTTTATAGTCTTGGTATTAAGTACTGTCTTAATCCCATGTTTTTCCCTTA  999
       |||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  -TTTATAGTCTTGGTATTAAGTACTGTCTTAATCCCATG-TTTTCCCTTA  996

seq1  CAAAAATTTCATCTCCTAGTAAATTGTAGATATATGTTATTAATTTATAC  1049
      | |||||||||| ||||||| ||||||| || |||| || | | ||||| 
seq2  C-AAAATTTCAT-TCCTAGT-AATTGTAAAT-TATGGTAATTA-TTATA-  1040

seq1  CCCCACAAAAGGAAAATGTTGATGGTATTTGTACAAATACCACATTGAAG  1099
      ||||||||   | ||||||||||||| ||||| |||  ||||||||||||
seq2  CCCCACAA---GGAAATGTTGATGGT-TTTGTCCAA--ACCACATTGAAG  1084

seq1  TTGTATCACTATGGGAAAGGGAGAAAAGTATTTC  1133
       |||||| ||||||| |||||| |||||| ||||
seq2  -TGTATC-CTATGGG-AAGGGA-AAAAGT-TTTC  1113

seq1: chr15_6336743_6337777
seq2: B6Ng01-065L09.g_69_1085 (reverse)

seq1  CAGGCAGCAAAAACATCCCGCCGCCACATTCCTGGAGAGTCCTCAGAGCC  50
      |||||| ||||||| | ||||||||||| |||| ||||||||||   | |
seq2  CAGGCA-CAAAAAC-TTCCGCCGCCACA-TCCT-GAGAGTCCTC--CGGC  44

seq1  AGCATCTGATTAGAACCATATCTCTACCGGGAGTGGCCGCGCGGCTATTT  100
      ||||| |||| ||||||| |||| |||||||| |||||||||||||| ||
seq2  AGCATTTGATAAGAACCA-ATCT-TACCGGGA-TGGCCGCGCGGCTA-TT  90

seq1  AAGTGGCGTTCTCCGCGTCCTCGGCGCTGCAGCCTTGAGGCTTCGGGCGC  150
      |||||||||| ||||||| ||  ||||||||||| ||| |||||||||||
seq2  AAGTGGCGTT-TCCGCGTTCT-AGCGCTGCAGCCCTGA-GCTTCGGGCGC  137

seq1  GGGGAAGTCATGCTGGCTCCACAGAAGCACTAGCTAGTCCGTGAGTAACT  200
      |||||||||  ||||||||||||||||||||||||||||||||||||| |
seq2  GGGGAAGTCTAGCTGGCTCCACAGAAGCACTAGCTAGTCCGTGAGTAA-T  186

seq1  CTGCCATCCCCCTTCCCTTCGGTCCCTTCTTTCTTTCTTTCTTTCTTTCT  250
      ||||||| |||||||||||||   || |||||| ||||||| ||||||||
seq2  CTGCCAT-CCCCTTCCCTTCG--TCCATCTTTC-TTCTTTC-TTCTTTCT  231

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTTTTTCCTTTTTTTT  300
      |   ||| |||||||| |||||||||||||||| |||||||| |||||||
seq2  T--CTTCCTTCTTTCTATCTTTCTTTCTTTCTC-TTTTTTCCCTTTTTTT  278

seq1  CTTTTTTTTTCTTTTTTTTCTTTTTTTGCGACCTACTTCTCTCCTTTGCT  350
      ||||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  CTTTTTTTTTC-TTTTTTTCTTTTTTTGCGACATACTTCTCTCCTTTGCT  327

seq1  GGCTCCTCTCTTCCCATCCCTGCCTTGGCTGCAGACCTTGGGCGCTGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTCTCTTCCCATCCCTGCCTTGGCTGCAGACCTTGGGCGCTGGGG  377

seq1  AAATCTTACAAATGAGACAGTGTACTCCGGGGAGAGCAGCGGGTTTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTACAAATGAGACAGTGTACTCCGGGGAGAGCAGCGGGTTTTGTG  427

seq1  GCCTGACATCTGTGGAATGCTTCCAAGG-AATGCATTTTACCTTTGGGGT  499
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCCTGACATCTGTGGAATGCTTCCAAGGAAATGCATTTTACCTTTGGGGT  477

seq1  CGGACTCAAGGCGCCCATCCTGTGACATTTAACGAGTCCC----TGTGTG  545
      ||||||||||||||||||||||||||||||||||||||||    ||||||
seq2  CGGACTCAAGGCGCCCATCCTGTGACATTTAACGAGTCCCTGTGTGTGTG  527

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTAC  577

seq1  ACGAGCCCTAGTTTTTAGGGCTTAGGGGACATCCCAGGGAATGCGCGGTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGCCCTAGTTTTTAGGGCTTAGGGGACATCCCAGGGAATGCGCGGTG  627

seq1  TGGCTGCTGACCACCTAATAAACTCCTGAATGATGTTCAGTTTTACTGTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCTGACCACCTAATAAACTCCTGAATGATGTTCAGTTTTACTGTG  677

seq1  CGACAAAGGCTGGGGACATGGTCTGTGCCTCCGAGGAGCTATTTTCTGCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACAAAGGCTGGGGACATGGTCTGTGCCTCCGAGGAGCTATTTTCTGCT  727

seq1  GACTGACAGCACAGGGCATTAAAAATGTGAACTTTGTCTTATACCAGCAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGACAGCACAGGGCATTAAAAATGTGAACTTTGTCTTATACCAGCAT  777

seq1  TCCTAAGAAAAGTATCTGCCCAAGCCACGTAACAAACTTGTTTTAAATCG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGAAAAGTATCTGCCCAAGCCACGTAACAAACTTGTTTTAAATCG  827

seq1  TGAAGCGTTTGAATGCTGTTTTTCTTGACTGTTGTAAATTATTTGGAAGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCGTTTGAATGCTGTTTTTCTTGACTGTTGTAAATTATTTGGAAGG  877

seq1  ATTAAGAATTCAAGAAGAGGGACTAAACTGTGTTTAAAACCTTGGAGACC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAATTCAAGAAGAGGGACTAAACTGTGTTTAAAACCTTGGAGACC  927

seq1  CTGCCAACGTAGCGGTTCTCTTTGCGGCATAGAGCTGGCTGTTATTTCTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAACGTAGCGGTTCTCTTTGCGGCATAGAGCTGGCTGTTATTTCTT  977

seq1  CCTGCCTGCTCTCCTCCACTTAATCCTGAGTCTGGAATTC  1035
      ||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTGCTCTCCTCCACTTAATCCTGAGTCTGGAATTC  1017