BAC Information

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BAC

Clone NameB6Ng01-065N15
Chromosome15 (Build37)
Map Location 57,717,982 - 57,820,468
singlet/doubletdoublet
Overlap geneDerl1, Wdr67, BC030396
Upstream geneLOC100040067, LOC100039984, BC026439, Zhx2
Downstream gene9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32, 8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e, EG631797, Tmem65, EG546638, Trmt12, Rnf139, Tatdn1, Ndufb9, Mtss1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065N15.bB6Ng01-065N15.g
ACCDH885206DH885207
length1,1741,033
definitionDH885206|Mus musculus domesticus DNA, BAC clone: B6Ng01-065N15, 5' end.DH885207|Mus musculus domesticus DNA, BAC clone: B6Ng01-065N15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,717,982 - 57,719,175)(57,819,425 - 57,820,468)
sequence
gaattctgttttagcatgactctagaactgtaagacttaaaccctctcta
caatgtcactcaacagagagccacattacaactacatttagtaaaatttc
cgatactgctatccttgttatgacctaggaatgagctgagaataaaccca
caattctgactccctgtttgcaaaagcagcgcaatacagggcagaagcaa
gtctctaaccttggaatcttgtaagtctagacttacgaggtggctttttt
ctgcttacgcagtgacatgtgtcctgggatacctaccctcatcctgtcat
attgcttaaatgattgggctcaagaaagtgaattgaaatgtgctctgtta
aagtgttttgaagcatatatggaggtgtgctactattacaacctttcaga
aaacacccactgacctggtttttaacattcacatctcacctactccagtg
ttcctttaagttactcaattcttgattttagaaaaagaaaaaaccctgag
gcttttcccctgactacattttctctaatgctgatgacacaatactattt
ttagccactgtgtgcacctgttctttagaaatcagtggctgtcaaaatac
ctcacttctcttccctgttcattaagcttacccttgagttatacttgctt
tcattcatctaagacttattattttttatttaaaattataatttgaaatc
actaggcactgagttttttcagaaggatgcagtgtttatttctgaaatcc
ccaacagccccttctttcctctatctgacatgtaactaggataaaggaaa
cagctttatttgcagggccgtgagtagaaatgtacattttaactctggag
agccaaagagcagggggatagaaagaggccacacaacctaacctaagcag
tgagcctcagtaccagggagagcacttgtctcaaactcatgtttactgtt
cctgagaatgtactcaagatatctctgccctttgaatacttgtacacttg
tccatgcacacacgtgcaacacacaccacagccatgcatgcccatggcac
ctggcccacgcatggtctccaagcagcaagatgtaggcagcaacctgtgt
cgaatgctgtgtagaaaatcctgttaccccagtcaccacagtcacttcat
ctctttcagctatttatgctatat
gaattcagcttgaagggaaggagggcagatcttgcttcttagggtgggga
atgctctagagaggacttgccaggctgctcctgagcctgcctccctttcc
tctcagaggctgtccttagagaagatgggggagctctagccaatttcctt
cccttttcttatcaccttcttctacgacagcatagatccagggtggctgg
atccatccctgccatcatctctgtgggaacagacagccccaaccttcttg
tctatgtatctgtctgtctgcctgtccctttctgcctgctctgtctgttt
ctgtctctgtctctgtctctgtctctgtctgcttgcctgtctccatttgc
ctgcctgcctgcctctctgtctctgtctctgtctctgtctctgtctgctt
gcctgtctccatttgcctgcctgcctgcctctctgtctctgtctctgtct
gcttgcctgtctccatttgcctgcctgcctgtctctctgtctttgtctct
gtctttctctctgtgtgtgttattggcatgtacactcatacaagctttgc
gtgtctgaaggatataacaaagtcagcctgcaggtgtctagtaggcaata
aaaatgggtgaagcttcagtaggctcaggccaacaggggagatttaggga
actgtggcagaagcaacccagtcaaagaggtaactaaaaacttgctccag
aggacacagatcttcctacctgctaagtggacccagaagtccacactttt
aggtgaaaccttctgatttcaagtgtcctaaaatcaaatgttgtgtcata
caaaggacatcagtggggcttgggtggggaaaccctgccacgtggggaga
tggaagcagggagactcagacaggaagctggactcccagctaaccttggc
tactttcaggtgttgcactggccttggagtctgggctgtagcaaagatcc
ctgtgcactggccatcctcagagaagcagagctagtacacttagcaatga
ccaaggatctcagtcttcatggcggctgtgccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_57717982_57719175
seq2: B6Ng01-065N15.b_49_1222

seq1  GAATTCTGTTTTAGCATGACTCTAGAACTGTAAGACTTAAACCCTCTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTTAGCATGACTCTAGAACTGTAAGACTTAAACCCTCTCTA  50

seq1  CAATGTCACTCAACAGAGAGCCACATTACAACTACATTTAGTAAAATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCACTCAACAGAGAGCCACATTACAACTACATTTAGTAAAATTTC  100

seq1  CGATACTGCTATCCTTGTTATGACCTAGGAATGAGCTGAGAATAAACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATACTGCTATCCTTGTTATGACCTAGGAATGAGCTGAGAATAAACCCA  150

seq1  CAATTCTGACTCCCTGTTTGCAAAAGCAGCGCAATACAGGGCAGAAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTGACTCCCTGTTTGCAAAAGCAGCGCAATACAGGGCAGAAGCAA  200

seq1  GTCTCTAACCTTGGAATCTTGTAAGTCTAGACTTACGAGGTGGCTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAACCTTGGAATCTTGTAAGTCTAGACTTACGAGGTGGCTTTTTT  250

seq1  CTGCTTACGCAGTGACATGTGTCCTGGGATACCTACCCTCATCCTGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTACGCAGTGACATGTGTCCTGGGATACCTACCCTCATCCTGTCAT  300

seq1  ATTGCTTAAATGATTGGGCTCAAGAAAGTGAATTGAAATGTGCTCTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTAAATGATTGGGCTCAAGAAAGTGAATTGAAATGTGCTCTGTTA  350

seq1  AAGTGTTTTGAAGCATATATGGAGGTGTGCTACTATTACAACCTTTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTTGAAGCATATATGGAGGTGTGCTACTATTACAACCTTTCAGA  400

seq1  AAACACCCACTGACCTGGTTTTTAACATTCACATCTCACCTACTCCAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCCACTGACCTGGTTTTTAACATTCACATCTCACCTACTCCAGTG  450

seq1  TTCCTTTAAGTTACTCAATTCTTGATTTTAGAAAAAGAAAAAACCCTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTAAGTTACTCAATTCTTGATTTTAGAAAAAGAAAAAACCCTGAG  500

seq1  GCTTTTCCCCTGACTACATTTTCTCTAATGCTGATGACACAATACTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCCCCTGACTACATTTTCTCTAATGCTGATGACACAATACTATTT  550

seq1  TTAGCCACTGTGTGCACCTGTTCTTTAGAAATCAGTGGCTGTCAAAATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCACTGTGTGCACCTGTTCTTTAGAAATCAGTGGCTGTCAAAATAC  600

seq1  CTCACTTCTCTTCCCTGTTCATTAAGCTTACCCTTGAGTTATACTTGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTCTCTTCCCTGTTCATTAAGCTTACCCTTGAGTTATACTTGCTT  650

seq1  TCATTCATCTAAGACTTATTATTTTTTATTTAAAATTATAATTTGAAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATCTAAGACTTATTATTTTTTATTTAAAATTATAATTTGAAATC  700

seq1  ACTAGGCACTGAGTTTTTTCAGAAGGATGCAGTGTTTATTTCTGAAATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCACTGAGTTTTTTCAGAAGGATGCAGTGTTTATTTCTGAAATCC  750

seq1  CCAACAGCCCCTTCTTTCCTCTATCTGACATGTAACTAGGAT-AAGGAAA  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCAACAGCCCCTTCTTTCCTCTATCTGACATGTAACTAGGATAAAGGAAA  800

seq1  CAGGCTTTATTTGCAGGGCCGTGAGTAGAAATGTACA-TTTAACTCTGGA  848
      || |||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CA-GCTTTATTTGCAGGGCCGTGAGTAGAAATGTACATTTTAACTCTGGA  849

seq1  GAGCCAAAGGAGCAGGGGGGATAGAAAGAGGCCACACAACCTAACCTAAG  898
      |||||||| ||||| |||||||||||||||||||||||||||||||||||
seq2  GAGCCAAA-GAGCA-GGGGGATAGAAAGAGGCCACACAACCTAACCTAAG  897

seq1  CAGTGAGCCTCAGGTACCAGGGAGAGCACTTGTCTCAAAACTCATGGTTT  948
      |||||||||||| ||||||||||||||||||||||| |||||||| ||||
seq2  CAGTGAGCCTCA-GTACCAGGGAGAGCACTTGTCTC-AAACTCAT-GTTT  944

seq1  ACTGTTCCTGAGGAATGTCACTCAAGGATAATCTCTGCCCTTTGAATACT  998
      ||||||||||| |||||| |||||| ||| ||||||||||||||||||||
seq2  ACTGTTCCTGA-GAATGT-ACTCAA-GAT-ATCTCTGCCCTTTGAATACT  990

seq1  TGTACACTTGTCCATGCACACACGTGCAACACACA-CACAGCCATGCATG  1047
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGTACACTTGTCCATGCACACACGTGCAACACACACCACAGCCATGCATG  1040

seq1  CCCATGAGCA-CTGGCACACGCATGGGTCTCCAAGCAAGCAAGATGATGG  1096
      |||||| ||| ||||| ||||||| ||||||||||| |||||||||  ||
seq2  CCCATG-GCACCTGGCCCACGCAT-GGTCTCCAAGC-AGCAAGATGTAGG  1087

seq1  CAGC-ACCTGTGTGCTGAATGCTGGTGTAAGCAAATCCTGTTACCCCCAG  1145
      |||| ||||||||   ||||||| |||| || |||||||||||||||   
seq2  CAGCAACCTGTGT--CGAATGCT-GTGT-AGAAAATCCTGTTACCCC--A  1131

seq1  GTCAGCCACAGTTCAACTTCACTCTCCTTCCAGCTATATATAGCTATAT  1194
      |||| |||||||   |||||| ||| ||| ||||||| ||| |||||||
seq2  GTCA-CCACAGT--CACTTCA-TCT-CTTTCAGCTATTTAT-GCTATAT  1174

seq1: chr15_57819425_57820468
seq2: B6Ng01-065N15.g_69_1101 (reverse)

seq1  GGGCACAGCCGCCATGATGAACTGAGATTCCTTTTGGTCTATTGCTAAGT  50
      ||||||||||||||||| | |||||||| |   |||||| ||||||||||
seq2  GGGCACAGCCGCCATGAAG-ACTGAGATCC---TTGGTC-ATTGCTAAGT  45

seq1  GTACTAGCTCTGCTCTCT-TGAGGATGGGGCCAGTGCACAGGGATTCCTT  99
      |||||||||||||| ||| |||||||  |||||||||||||||||  |||
seq2  GTACTAGCTCTGCT-TCTCTGAGGAT--GGCCAGTGCACAGGGAT--CTT  90

seq1  GGCTACAGCCCAGACTCCAAGGCCAGTGCAACACCCTGGAAAGTAGCCAA  149
       ||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  TGCTACAGCCCAGACTCCAAGGCCAGTGCAACACC--TGAAAGTAGCCAA  138

seq1  GGTTAGCTGGGAAGTCCAGCTTCCTGTCTGAGTCTCCCTGCTTCCATCTC  199
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGCTGGG-AGTCCAGCTTCCTGTCTGAGTCTCCCTGCTTCCATCTC  187

seq1  CCCACGTGGCAGGGTATCCCCACCCAAGCCCCACTGATGTCCTTTGTATG  249
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCCACGTGGCAGGGTTTCCCCACCCAAGCCCCACTGATGTCCTTTGTATG  237

seq1  ACACAACATTTGATTTTAGGACACTTGAAAATCAGAAGGTTTCACCTAAA  299
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACACAACATTTGATTTTAGGACACTTG-AAATCAGAAGGTTTCACCTAAA  286

seq1  AGTGTGGACTTCTGGGTCCACTTAGCAGGTAGGAAGATCTGTGTCCTCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGACTTCTGGGTCCACTTAGCAGGTAGGAAGATCTGTGTCCTCTG  336

seq1  GAGCAAG-TTTTAGTTACCTCTTTGACTGGGTTGCTTCTGCCACAGTTCC  398
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGTTTTTAGTTACCTCTTTGACTGGGTTGCTTCTGCCACAGTTCC  386

seq1  CTAAATCT-CCCTGTTGGCCTGAGCCTACTGAAGCTTCACCCATTTTTAT  447
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCTCCCCTGTTGGCCTGAGCCTACTGAAGCTTCACCCATTTTTAT  436

seq1  TGCCTACTAGACACCTGCAGGCTGACTTTGTTATATCCTTCAGACACGCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACTAGACACCTGCAGGCTGACTTTGTTATATCCTTCAGACACGCA  486

seq1  AAGCTTGTATGAGTGTACATGCCAATAACACACACAGAGAGAAAGACAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGTATGAGTGTACATGCCAATAACACACACAGAGAGAAAGACAGA  536

seq1  GACAAAGACAGAGAGACAGGCAGGCAGGCAAATGGAGACAGGCAAGCAGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGACAGAGAGACAGGCAGGCAGGCAAATGGAGACAGGCAAGCAGA  586

seq1  CAGAGACAGAGACAGAGAGGCAGGCAGGCAGGCAAATGGAGACAGGCAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACAGAGACAGAGAGGCAGGCAGGCAGGCAAATGGAGACAGGCAAG  636

seq1  CAGACAGAGACAGAGACAGAGACAGAGACAGAGAGGCAGGCAGGCAGGCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGAGACAGAGACAGAGACAGAGACAGAGAGGCAGGCAGGCAGGCA  686

seq1  AATGGAGACAGGCAAGCAGACAGAGACAGAGACAGAGACAGAGACAGAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGACAGGCAAGCAGACAGAGACAGAGACAGAGACAGAGACAGAAA  736

seq1  CAGACAGAGCAGGCAGAAAGGGACAGGCAGACAGACAGATACATAGACAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGAGCAGGCAGAAAGGGACAGGCAGACAGACAGATACATAGACAA  786

seq1  GAAGGTTGGGGCTGTCTGTTCCCACAGAGATGATGGCAGGGATGGATCCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTGGGGCTGTCTGTTCCCACAGAGATGATGGCAGGGATGGATCCA  836

seq1  GCCACCCTGGATCTATGCTGTCGTAGAAGAAGGTGATAAGAAAAGGGAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCCTGGATCTATGCTGTCGTAGAAGAAGGTGATAAGAAAAGGGAAG  886

seq1  GAAATTGGCTAGAGCTCCCCCATCTTCTCTAAGGACAGCCTCTGAGAGGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGGCTAGAGCTCCCCCATCTTCTCTAAGGACAGCCTCTGAGAGGA  936

seq1  AAGGGAGGCAGGCTCAGGAGCAGCCTGGCAAGTCCTCTCTAGAGCATTCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGCAGGCTCAGGAGCAGCCTGGCAAGTCCTCTCTAGAGCATTCC  986

seq1  CCACCCTAAGAAGCAAGATCTGCCCTCCTTCCCTTCAAGCTGAATTC  1044
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTAAGAAGCAAGATCTGCCCTCCTTCCCTTCAAGCTGAATTC  1033