BAC Information

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BAC

Clone NameB6Ng01-066O14
Chromosome15 (Build37)
Map Location 6,346,770 - 6,492,815
singlet/doubletdoublet
Overlap geneDab2, C9, LOC100039396, LOC100039412
Upstream geneLOC666291, LOC666319, LOC100039358, LOC666323
Downstream geneFyb, LOC100039453, EG665511, 4921505C17Rik, Osmr, Lifr, Egflam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066O14.bB6Ng01-066O14.g
ACCDH885957DH885958
length1,1441,107
definitionDH885957|Mus musculus domesticus DNA, BAC clone: B6Ng01-066O14, 5' end.DH885958|Mus musculus domesticus DNA, BAC clone: B6Ng01-066O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,491,663 - 6,492,815)(6,346,770 - 6,347,897)
sequence
gaattcaatgcattgaaaccttcgcagtgtaatagtggtcagcataaaga
aagcatttgagaacttgttaggaattttttgttactgtattcccaatttt
aaaaagtatgaaagtgtttcgaacattttgtatcttaggacaatgctgta
cttacaggaaaaagaaataataataaaaattcctaaaaaatatgcacttt
ttactccacagactatcccatctgtcagtctgggctcgtatgttctctta
aaggagtgtgtggtgagaataaataagatatttctataaaatcagaacag
tctaattcaagaaagtgaactgatagaaatatcccagacccctcttttct
gtgaatctgcgtgtttcttttcaccttttaaagaatgaaaacccacttat
cctgtgaaataaggatgcccacagtcactgtctacacatctggggaactc
tgaaccttccctgttctttagttcagtgatgtgtcctctgggacaagcct
aagggaaactgtatcagcattcagttaaagacggaggtggattttgtctt
atcaaacaggaagtatagtgatctaagtttggtcttactgtttcccatca
tcatttcacataaagtgatttacatggataccctcttcccatctggaatg
ggagcattttgtttttaaatggtgtcattacatattaacatagaagcaca
gttttgcctttaagtagattaggcttttgcaagtaggagtcagccaacaa
atatgcaagattgcagaaccaaatgaacattaaaggcacttagtgagaat
ttcactgatggagaagggagacagggagtagccagtcaagaggcatttgg
tgggcaaaggagcagtgaacattttcatgaaggagtaaagttgctgccaa
gcgataagggaagtgtcccacctgctctggcaggaaggagagcgaggagg
ctgtgccagggagccactcacaggatgtcatctacactgtctagtgatat
gttttcaaatcattgactaaatgttaatagaaatttgctttgggttactc
ggacttttatttctggaaaaatatttggtcatcgtgcacggctccacttt
ccagagggaaacgataagcttttttgtttgtttcatacttgaag

gaattctttgtgaagatggaaagtgcttagcgaatgcacctttcgacttt
aagcattttaggcatagtagggaatagcatagtatttatgtagaagaggt
aacgtacatataccatgaagcagacactcataaggagtaatgtgacaatg
aggcatggctgaggaagaacgctggaactcaggaaagtgtaagaagcagg
agaaggatgagaagcagcacgacaaccagggacaactgcaaaacaaagca
acaaaacagtaagtcggagccttgctggataagtagatacctgaacaggt
gaggatattccaagctacagacaacactctcacaggttctgtaggtacag
aacaaatcccatcaaatctcgtcccagcccatctacagtggtgctaacgc
tcagctcctgatgtgggaactcttctgcagcgtatcggatgcattcgtgc
tctgtttgaaagtctagatgcagaggcttcctgcaaccagcatctgtgga
agcttcatgagttgctgctgtagactactttcttatttctatgagttgct
gctgtagactactttcttgctgtagactactttcttacttctatgagttg
ctgctgtagactactttcttgctgtagactactttcttacttctatgagt
tgctgctgtagactactttcttgctgtagactactttcttacttctatga
gttgctgctgtagactactttcttaagaagactgtcctaacaggaggcta
atgctttttgtaactaggtagtgcactgtaaccaaagctagcttgaggga
atgggaaggagaaatggttacattttcctgataactgttttcatttaaat
ctcaggtcaggagtttgcctcatctgaaaatgcctttcttgagatttaga
tcagctagcacatttggtactagatgtacccattgacatgtcctctgtga
cattcctggtggtgaaactgatgccagatgcatgtaatgttttcttcgtg
tttatgaagctagtgatggatcagacttgagtttagtaactttaaggaaa
acacatggtattcttaccacctgcttgacatttctcctctctagatcact
gccacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_6491663_6492815
seq2: B6Ng01-066O14.b_46_1189 (reverse)

seq1  CTTCAATTATGAAAACAACAAAAAAGCTTTATCGTTTTCCCCTCTTGGGA  50
      |||||| |||||||  ||||||||||| |||||||||  ||||||  |||
seq2  CTTCAAGTATGAAACAAACAAAAAAGC-TTATCGTTT--CCCTCT--GGA  45

seq1  AAGTGGAG-CGTGCACGGATGACACATTATTTTTCAGAAAATAAAAGTCC  99
      |||||||| ||||||| ||||||  | ||||||||   ||||||||||||
seq2  AAGTGGAGCCGTGCAC-GATGACCAAATATTTTTCCAGAAATAAAAGTCC  94

seq1  GAGTAACCCAAAGCAGATATCTATTAACATTTTAGTCAATGATTTTGAAA  149
      ||||||||||||||| || |||||||||| |||||||||||| |||||||
seq2  GAGTAACCCAAAGCAAATTTCTATTAACA-TTTAGTCAATGA-TTTGAAA  142

seq1  ACATATCACTAGACAGTGTAGATGACATTCCTGTGAGTGGCTCCCTGGCA  199
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACATATCACTAGACAGTGTAGATGACA-TCCTGTGAGTGGCTCCCTGGCA  191

seq1  CAGCCTCCTCGCTCTCCCTTCCTGCCAGAGCAGGTGGGACACTTCCCTTA  249
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAGCCTCCTCGCTCT-CCTTCCTGCCAGAGCAGGTGGGACACTTCCCTTA  240

seq1  TCGCTTGGCAGCAACTTTACTCCTTCATGAAAATGTTCACTGCTCCTTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTTGGCAGCAACTTTACTCCTTCATGAAAATGTTCACTGCTCCTTTG  290

seq1  CCCACCTAATGCCTCTTGACTGGCTACTCCCTGTCTCCCTTCTCCATCAG  349
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCAAATGCCTCTTGACTGGCTACTCCCTGTCTCCCTTCTCCATCAG  340

seq1  TGAAATTCTCACTAAGTGCCTTTAATGTTCATTTGGTTCTGCAATCTTGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTCTCACTAAGTGCCTTTAATGTTCATTTGGTTCTGCAATCTTGC  390

seq1  ATATTTGTTGGCTGACTCCTACTTGCAAAAGCCTAATCTACTTAAAGGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTTGGCTGACTCCTACTTGCAAAAGCCTAATCTACTTAAAGGCA  440

seq1  AAACTGTGCTTCTATGTTAATATGTAATGACACCATTTAAAAACAAAATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTGCTTCTATGTTAATATGTAATGACACCATTTAAAAACAAAATG  490

seq1  CTCCCATTCCAGATGGGAAGAGGGTATCCATGTAAATCACTTTATGTGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATTCCAGATGGGAAGAGGGTATCCATGTAAATCACTTTATGTGAA  540

seq1  ATGATGATGGGAAACAGTAAGACCAAACTTAGATCACTATACTTCCTGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGATGGGAAACAGTAAGACCAAACTTAGATCACTATACTTCCTGTT  590

seq1  TGATAAGACAAAATCCACCTCCGTCTTTAACTGAATGCTGATACAGTTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGACAAAATCCACCTCCGTCTTTAACTGAATGCTGATACAGTTTC  640

seq1  CCTTAGGCTTGTCCCAGAGGACACATCACTGAACTAAAGAACAGGGAAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGGCTTGTCCCAGAGGACACATCACTGAACTAAAGAACAGGGAAGG  690

seq1  TTCAGAGTTCCCCAGATGTGTAGACAGTGACTGTGGGCATCCTTATTTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGTTCCCCAGATGTGTAGACAGTGACTGTGGGCATCCTTATTTCA  740

seq1  CAGGATAAGTGGGTTTTCATTCTTTAAAAGGTGAAAAGAAACACGCAGAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATAAGTGGGTTTTCATTCTTTAAAAGGTGAAAAGAAACACGCAGAT  790

seq1  TCACAGAAAAGAGGGGTCTGGGATATTTCTATCAGTTCACTTTCTTGAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAAAAGAGGGGTCTGGGATATTTCTATCAGTTCACTTTCTTGAAT  840

seq1  TAGACTGTTCTGATTTTATAGAAATATCTTATTTATTCTCACCACACACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGTTCTGATTTTATAGAAATATCTTATTTATTCTCACCACACACT  890

seq1  CCTTTAAGAGAACATACGAGCCCAGACTGACAGATGGGATAGTCTGTGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAGAGAACATACGAGCCCAGACTGACAGATGGGATAGTCTGTGGA  940

seq1  GTAAAAAGTGCATATTTTTTAGGAATTTTTATTATTATTTCTTTTTCCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAGTGCATATTTTTTAGGAATTTTTATTATTATTTCTTTTTCCTG  990

seq1  TAAGTACAGCATTGTCCTAAGATACAAAATGTTCGAAACACTTTCATACT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTACAGCATTGTCCTAAGATACAAAATGTTCGAAACACTTTCATACT  1040

seq1  TTTTAAAATTGGGAATACAGTAACAAAAAATTCCTAACAAGTTCTCAAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATTGGGAATACAGTAACAAAAAATTCCTAACAAGTTCTCAAAT  1090

seq1  GCTTTCTTTATGCTGACCACTATTACACTGCGAAGGTTTCAATGCATTGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTTTATGCTGACCACTATTACACTGCGAAGGTTTCAATGCATTGA  1140

seq1  ATTC  1153
      ||||
seq2  ATTC  1144


seq1: chr15_6346770_6347897
seq2: B6Ng01-066O14.g_70_1176

seq1  GAATTCTTTGCGAAGATGGAAAGTGCTTAGCGAATGCACCTTTCGACTTT  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTGAAGATGGAAAGTGCTTAGCGAATGCACCTTTCGACTTT  50

seq1  AAGCATTTTAGGCATAGTAGGGAATAGCATAGTATTTATGTAGAAGAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTTAGGCATAGTAGGGAATAGCATAGTATTTATGTAGAAGAGGT  100

seq1  AACGTACATATACCATGAAGCAGACACTCATAAGGAGTAATGTGACAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTACATATACCATGAAGCAGACACTCATAAGGAGTAATGTGACAATG  150

seq1  AGGCATGGCTGAGGAAGAACGCTGGAACTCAGGAAAGTGTAAGAAGCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGGCTGAGGAAGAACGCTGGAACTCAGGAAAGTGTAAGAAGCAGG  200

seq1  AGAAGGATGAGAAGCAGCACGACAACCAGGGACAACTGCAAAACAAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGATGAGAAGCAGCACGACAACCAGGGACAACTGCAAAACAAAGCA  250

seq1  ACAAAACAGTAAGTCGGAGCCTTGCTGGATAAGTAGATACCTGAACAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAGTAAGTCGGAGCCTTGCTGGATAAGTAGATACCTGAACAGGT  300

seq1  GAGGATATTCCAAGCTACAGACAACACTCTCACAGGTTCTGTAGGTACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATATTCCAAGCTACAGACAACACTCTCACAGGTTCTGTAGGTACAG  350

seq1  AACAAATCCCATCAAATCTCGTCCCAGCCCATCTACAGTGGTGCTAACGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATCCCATCAAATCTCGTCCCAGCCCATCTACAGTGGTGCTAACGC  400

seq1  TCAGCTCCTGATGTGGGAACTCTTCTGCAGCGTATCGGATGCATTCGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCTGATGTGGGAACTCTTCTGCAGCGTATCGGATGCATTCGTGC  450

seq1  TCTGTTTGAAAGTCTAGATGCAGAGGCTTCCTGCAACCAGCATCTGTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTGAAAGTCTAGATGCAGAGGCTTCCTGCAACCAGCATCTGTGGA  500

seq1  AGCTTCATGAGTTGCTGCTGTAGACTACTTTCTTATTTCTATGAGTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCATGAGTTGCTGCTGTAGACTACTTTCTTATTTCTATGAGTTGCT  550

seq1  GCTGTAGACTACTTTCTTGCTGTAGACTACTTTCTTACTTCTATGAGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGACTACTTTCTTGCTGTAGACTACTTTCTTACTTCTATGAGTTG  600

seq1  CTGCTGTAGACTACTTTCTTGCTGTAGACTACTTTCTTACTTCTATGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTAGACTACTTTCTTGCTGTAGACTACTTTCTTACTTCTATGAGT  650

seq1  TGCTGCTGTAGACTACTTTCTTGCTGTAGACTACTTTCTTACTTCTATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGTAGACTACTTTCTTGCTGTAGACTACTTTCTTACTTCTATGA  700

seq1  GTTGCTGCTGTAGACTACTTTCTTAAGAAGACTGTCCTAACAGGAGGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGCTGTAGACTACTTTCTTAAGAAGACTGTCCTAACAGGAGGCTA  750

seq1  ATGCTTTTTGTAACTAGGTAGTGCACTGTAACCAAAGCTAGCTTGAGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTTTGTAACTAGGTAGTGCACTGTAACCAAAGCTAGCTTGAGGGA  800

seq1  ATGGGAAGGAGAAATGGTTACATTTTCCTGATAACTGTTTTCATTTAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAGGAGAAATGGTTACATTTTCCTGATAACTGTTTTCATTTAAAT  850

seq1  CTCAGGTCAGGAGTTTGCCTCATCTGAAAATGCCTTTCTTGAGATTTTAG  900
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  CTCAGGTCAGGAGTTTGCCTCATCTGAAAATGCCTTTCTTGAGATTT--A  898

seq1  GATCAGCTAGCACATTTGGTACTAAGATGTACCCATTGACATGTCCTCTG  950
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GATCAGCTAGCACATTTGGTACT-AGATGTACCCATTGACATGTCCTCTG  947

seq1  TGACATTCCTGGTGGTTGAAACTGATTGCCAGATGCATGTAATGTTTTCT  1000
      ||||||||||||||| ||||||||| ||||||||||||||||||||||||
seq2  TGACATTCCTGGTGG-TGAAACTGA-TGCCAGATGCATGTAATGTTTTCT  995

seq1  TCCGGTGTTTATGAAGCTAGTGATGGATCAGAACCTTGAGTTTTAAGTTA  1050
      ||  ||||||||||||||||||||||||||||  |||||||||  || ||
seq2  TC--GTGTTTATGAAGCTAGTGATGGATCAGA--CTTGAGTTT--AG-TA  1038

seq1  ACTTTACAGAAAACACCACTGGTATTCTTTAACAACCCTGCCTTGCACAA  1100
      ||||||  ||||||||   ||||||||||  || | |||| |||| ||| 
seq2  ACTTTAAGGAAAACAC--ATGGTATTCTT--ACCA-CCTG-CTTG-ACAT  1081

seq1  TTCTTCCTCTCAGAGATCACTGCCACAA  1128
      ||| |||||||  |||||||||||||||
seq2  TTC-TCCTCTC-TAGATCACTGCCACAA  1107


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