BAC Information

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BAC

Clone NameB6Ng01-067B06
Chromosome15 (Build37)
Map Location 96,007,538 - 96,008,672
singlet/doubletsinglet
Overlap genenone
Upstream geneNell2, Dbx2, LOC100042684, LOC667849, EG629300, LOC667864, Tmem16f, LOC100043329, D030018L15Rik
Downstream geneLOC100043335, EG667869, LOC667874, LOC667894, Arid2, Sfrs2ip, Slc38a1, Slc38a2, LOC667941, LOC546651, Slc38a4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067B06.bB6Ng01-067B06.g
ACCDH886076DH886077
length1,1161,061
definitionDH886076|Mus musculus domesticus DNA, BAC clone: B6Ng01-067B06, 5' end.DH886077|Mus musculus domesticus DNA, BAC clone: B6Ng01-067B06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctctgttgtatgttaggcacgaggatgaactaagatgacgggt
aaactagccatctgctaaggactcactcaccaggcaagctggcaggcagc
atttgcctcccaaggaacagtggtttcagagtttggccagggtcttattt
gtcttctggatgctaccctgtcttctggggcctggctaacgatctacaga
gcatatggctgggctctttcctcttctattggcgtttgatctcagtgatg
ggccggcggagttggacaccatgtgtagccttgtagaacctggaatttgc
ctatgctcagtcttggatggatccggaatagtttcatggaacagtgataa
ttgcccacaccaatcctgtgtcattttgaggggtctgctgatggtacaaa
cactaactgttgttaaggctcattgctagtaaaaaacaaacaaacaaaca
aacaaacaaaaaaaaaacctaatactaggtgtctcttagactgtctttca
actttaggtcaggcaaagcatggttaccaaggaagtcaaatgtattttta
tgatgaaatgttggcaacaccgagtattctgagagcacatgattgaaagc
gtgaaacctgggatactttcaataacaatcataagagtacagaggagacc
catacgtatgtgatcaattaaatacacaggggaaagaccaagttgactag
gacagcacatcactctgttttcaccctgaattcactcattacagttgagg
gttgagtccctccttcctccctgctgccccacccccagcctttctttttc
tttctctctgcatggtgtatctgttgtatgaacttggggttggagcagag
gctgaaggagatgatgtcttcctctatccatctttgcctaagccttgaga
ctgggtctcttactgaattggaatctctcggttatcagctagggctgggt
gccagtgacctcttgagatctgcccgtgtgacctttgtcgtgtgacattt
ctgggtttatgtggtgtcgtgattgaaatcaccaagctcctgcccatctg
tctatttgtactcattctgagttcagtttaataaataatttgggaattct
aagtatgtgtcttagt
gaattcaataaagagatagaaatactgaagaaggttcagactgaaatgct
ggaaatgaaatcctcaataggtcaagtaggaatctcctcggaaagccttt
accagcagactagatagaggtgaatatagtatgtcagggcttgcagaaga
gttacaatgttcagaccacgacagattcattaataaactagcagcacaat
tagaaacgctttaaaatgccaactctacaaatcgtgaagattaggaaaag
agagagggaaaatgctcatgcttaaaagcatagaaaacattttcaataaa
ctcacagcagaaagcttgacaaatctggagaaagagatgcctatccaggt
acaagagatatttagaacacaaaacagccaagaccagagaagagcctacc
catacggttgtcttttaaacgctacataagaacaaagacagtatattgag
acctgtaatagaggaacaccaaggtcataaaggcaggcccatcagaatga
tagcagacttctcagcagaaactttagtagacaggatggattggtataca
tcaagctctaaaaggcagtaattataaacccaggttgctgtgcaccgaaa
aaccatctgtcattgccaaaggagaaagaaaaatgacaaaatcagactga
agggtctccagagcactaagtcagctctactagagataaatgaggaaatc
cttcaggctgaagaaaaagataaacattactgaagttacaggagagacta
aaccatgctacaaccagagttacttaaatggggaataagaaaacacaaaa
tgctacaaaccaatagaataacagtagagtatccactattcagtgataat
tctgagtattaatggtttaaattcatcagtcaaaagacacagactatagc
tggcaagatagctcattggtaaaagtcctggcttccaaggttgatggtct
gagtttgacccccagaacacacatatggtgaaaaagagagccaactgctg
aaagttgcccctcccccaatcacatgtatgtcctgatactaaggaataca
tgtggtgggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_96007538_96008672
seq2: B6Ng01-067B06.b_47_1162 (reverse)

seq1  ACTAAGACACATACTTAGAAATTCTCAAATGTATTTATTAAAACTTGAAC  50
      |||||||||||||||||| ||||| ||||| |||||||||||   |||| 
seq2  ACTAAGACACATACTTAG-AATTCCCAAAT-TATTTATTAAA--CTGAA-  45

seq1  CTCAGGATTGGAGTAACAAATAGGACAGACTGGGCAAGGGAGCTTGGTGA  100
      ||||| ||  |||| ||||||| |||||| ||||||  ||||||||||||
seq2  CTCAGAAT--GAGT-ACAAATA-GACAGA-TGGGCA--GGAGCTTGGTGA  88

seq1  TTTCAAATTCACGACACTCACATAAAACCCAGAAATGGTCACACGGACAA  150
      ||||||  ||||||||| ||||| |||||||||||| ||||||| |||||
seq2  TTTCAA--TCACGACAC-CACAT-AAACCCAGAAAT-GTCACAC-GACAA  132

seq1  AGGTCACACGGGCAGATCTCAAGAGGTCACTGGCCACCCAGCCCTAGCTG  200
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGGTCACACGGGCAGATCTCAAGAGGTCACTGG-CACCCAGCCCTAGCTG  181

seq1  ATAACCGAGAGATTCCAATTCAGTAAGAGACCCAGTCTCAAGGCTTAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCGAGAGATTCCAATTCAGTAAGAGACCCAGTCTCAAGGCTTAGGC  231

seq1  AAAGATGGATAGAGGAAGACATCATCTCCTTCAGCCTCTGCTCCAACCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGGATAGAGGAAGACATCATCTCCTTCAGCCTCTGCTCCAACCCC  281

seq1  AAGTTCATACAACAGATACACCATGCAGAGAGAAAGAAAAAGAAAGGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCATACAACAGATACACCATGCAGAGAGAAAGAAAAAGAAAGGCTG  331

seq1  GGGGTGGGGCAGCAGGGAGGAAGGAGGGACTCAACCCTCAACTGTAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGCAGCAGGGAGGAAGGAGGGACTCAACCCTCAACTGTAATGA  381

seq1  GTGAATTCAGGGTGAAAACAGAGTGATGTGCTGTCCTAGTCAACTTGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTCAGGGTGAAAACAGAGTGATGTGCTGTCCTAGTCAACTTGGTC  431

seq1  TTTCCCCTGTGTATTTAATTGATCACATACGTATGGGTCTCCTCTGTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTGTGTATTTAATTGATCACATACGTATGGGTCTCCTCTGTACT  481

seq1  CTTATGATTGTTATTGAAAGTATCCCAGGTTTCACGCTTTCAATCATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGATTGTTATTGAAAGTATCCCAGGTTTCACGCTTTCAATCATGTG  531

seq1  CTCTCAGAATACTCGGTGTTGCCAACATTTCATCATAAAAATACATTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGAATACTCGGTGTTGCCAACATTTCATCATAAAAATACATTTGA  581

seq1  CTTCCTTGGTAACCATGCTTTGCCTGACCTAAAGTTGAAAGACAGTCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTGGTAACCATGCTTTGCCTGACCTAAAGTTGAAAGACAGTCTAA  631

seq1  GAGACACCTAGTATTAGGTTTTTTTTTTGTTTGTTTGTTTGTTTGTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACCTAGTATTAGGTTTTTTTTTTGTTTGTTTGTTTGTTTGTTTGT  681

seq1  TTTTTACTAGCAATGAGCCTTAACAACAGTTAGTGTTTGTACCATCAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACTAGCAATGAGCCTTAACAACAGTTAGTGTTTGTACCATCAGCA  731

seq1  GACCCCTCAAAATGACACAGGATTGGTGTGGGCAATTATCACTGTTCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCTCAAAATGACACAGGATTGGTGTGGGCAATTATCACTGTTCCAT  781

seq1  GAAACTATTCCGGATCCATCCAAGACTGAGCATAGGCAAATTCCAGGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTATTCCGGATCCATCCAAGACTGAGCATAGGCAAATTCCAGGTTC  831

seq1  TACAAGGCTACACATGGTGTCCAACTCCGCCGGCCCATCACTGAGATCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGCTACACATGGTGTCCAACTCCGCCGGCCCATCACTGAGATCAA  881

seq1  ACGCCAATAGAAGAGGAAAGAGCCCAGCCATATGCTCTGTAGATCGTTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCAATAGAAGAGGAAAGAGCCCAGCCATATGCTCTGTAGATCGTTAG  931

seq1  CCAGGCCCCAGAAGACAGGGTAGCATCCAGAAGACAAATAAGACCCTGGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCCCAGAAGACAGGGTAGCATCCAGAAGACAAATAAGACCCTGGC  981

seq1  CAAACTCTGAAACCACTGTTCCTTGGGAGGCAAATGCTGCCTGCCAGCTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCTGAAACCACTGTTCCTTGGGAGGCAAATGCTGCCTGCCAGCTT  1031

seq1  GCCTGGTGAGTGAGTCCTTAGCAGATGGCTAGTTTACCCGTCATCTTAGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTGAGTGAGTCCTTAGCAGATGGCTAGTTTACCCGTCATCTTAGT  1081

seq1  TCATCCTCGTGCCTAACATACAACAGAGAGAATTC  1135
      |||||||||||||||||||||||||||||||||||
seq2  TCATCCTCGTGCCTAACATACAACAGAGAGAATTC  1116